BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0166.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576778.1| OmpA/MotB [Nitrobacter hamburgensis X14] >gi|91... 499 e-139 ref|NP_770441.1| chemotaxis protein [Bradyrhizobium japonicum US... 487 e-136 ref|ZP_01046396.1| OmpA/MotB [Nitrobacter sp. Nb-311A] >gi|85697... 485 e-135 ref|YP_001206633.1| putative chemotaxis protein MotB [Bradyrhizo... 484 e-135 ref|YP_001239510.1| putative chemotaxis protein MotB [Bradyrhizo... 480 e-134 >ref|YP_576778.1| OmpA/MotB [Nitrobacter hamburgensis X14] gb|ABE62318.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 276 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 239/276 (86%), Positives = 258/276 (93%) Query: 1 MAKKKRGDAHTGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDAFGVQT 60 MAKKKRGDAH GGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDAFGVQT Sbjct: 1 MAKKKRGDAHGGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDAFGVQT 60 Query: 61 NVRYSGIVESDGLPTRPKLKNVEHISPEDSSANPTPDEKERSQINGARLKIDREFALASA 120 VRYSGI+ESDGLPTRPKLKN H+ PE++SA PTP+E+ER + GARLK DREFALASA Sbjct: 61 EVRYSGIIESDGLPTRPKLKNSAHVPPEETSATPTPNEQERFKTAGARLKTDREFALASA 120 Query: 121 SLRQALQDMPELTEISKNIMFEETKEGLNLEIVDQDGRSMFADGSREPYDRTRRLIQKLA 180 SLRQALQDMPELTE+SK+IMFEETKEGLNLEIVDQDGRSMFADGSREPY+RTR LI+KLA Sbjct: 121 SLRQALQDMPELTELSKHIMFEETKEGLNLEIVDQDGRSMFADGSREPYERTRMLIRKLA 180 Query: 181 APLKATPLRVAIVGHTAAGFVPARSDYDGFDLSADRANAVRQILEREGLPPSHIFAVSGK 240 APLKATPLR++I GHTA+ F+P RSDYDGFDLSADRANAVRQILEREGLPPSHIFAV+GK Sbjct: 181 APLKATPLRISITGHTASNFIPTRSDYDGFDLSADRANAVRQILEREGLPPSHIFAVAGK 240 Query: 241 ADGQPLFPDDPTLPANRRVTITLMRENPPLPPDLKP 276 +D PLFPDDP+L ANRRVTITLMRE PPLPP+LKP Sbjct: 241 SDSMPLFPDDPSLAANRRVTITLMREAPPLPPNLKP 276 >ref|NP_770441.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49066.1| pomB [Bradyrhizobium japonicum USDA 110] Length = 276 Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust. Identities = 232/276 (84%), Positives = 256/276 (92%) Query: 1 MAKKKRGDAHTGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDAFGVQT 60 MAKKKRGDAH GGHGWFVTFADLMGLMMSFFVMLVAFST D NKLKIVAGSMRDAFGVQ+ Sbjct: 1 MAKKKRGDAHGGGHGWFVTFADLMGLMMSFFVMLVAFSTQDANKLKIVAGSMRDAFGVQS 60 Query: 61 NVRYSGIVESDGLPTRPKLKNVEHISPEDSSANPTPDEKERSQINGARLKIDREFALASA 120 RY+GIVESDGLPTRP+LKNV+HI PED+S PTPD+++R + +GA++K+DR FALA+A Sbjct: 61 EARYAGIVESDGLPTRPRLKNVDHIQPEDASNTPTPDQEDRDRTSGAKIKVDRNFALAAA 120 Query: 121 SLRQALQDMPELTEISKNIMFEETKEGLNLEIVDQDGRSMFADGSREPYDRTRRLIQKLA 180 SLRQALQDMPELTE+SK+IMFEETK+GLNLEIVDQDGRSMFADGS+ PYDRTRRL++KLA Sbjct: 121 SLRQALQDMPELTEMSKHIMFEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRRLVEKLA 180 Query: 181 APLKATPLRVAIVGHTAAGFVPARSDYDGFDLSADRANAVRQILEREGLPPSHIFAVSGK 240 PLKATPLRV+I GHTAAGFVP RSDY FDLSADRANAVRQILEREGLP SHIFAVSGK Sbjct: 181 IPLKATPLRVSIAGHTAAGFVPTRSDYGAFDLSADRANAVRQILEREGLPASHIFAVSGK 240 Query: 241 ADGQPLFPDDPTLPANRRVTITLMRENPPLPPDLKP 276 AD QPLFPDDP+L ANRRVTITLMRE+PPLPP+LKP Sbjct: 241 ADTQPLFPDDPSLAANRRVTITLMREDPPLPPNLKP 276 >ref|ZP_01046396.1| OmpA/MotB [Nitrobacter sp. Nb-311A] gb|EAQ35710.1| OmpA/MotB [Nitrobacter sp. Nb-311A] Length = 276 Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust. Identities = 232/276 (84%), Positives = 251/276 (90%) Query: 1 MAKKKRGDAHTGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDAFGVQT 60 MAKKKRGDAH GGHGWFVTFADLMGLMMSFFVMLVAFSTMDN KLKIVAGSMRDAFG QT Sbjct: 1 MAKKKRGDAHGGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNQKLKIVAGSMRDAFGSQT 60 Query: 61 NVRYSGIVESDGLPTRPKLKNVEHISPEDSSANPTPDEKERSQINGARLKIDREFALASA 120 VRYSGI+ESDGLPTRPKLKN H+ P+++S PTPDE+ER + GARLK DREFALASA Sbjct: 61 EVRYSGIIESDGLPTRPKLKNAAHVPPDETSTTPTPDEQERFKTAGARLKTDREFALASA 120 Query: 121 SLRQALQDMPELTEISKNIMFEETKEGLNLEIVDQDGRSMFADGSREPYDRTRRLIQKLA 180 SLRQALQDMPELTE+SK+IMFEETKEGLNLEIVDQDGRSMFA+GS+EPY+RTR LI KLA Sbjct: 121 SLRQALQDMPELTELSKHIMFEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRMLIGKLA 180 Query: 181 APLKATPLRVAIVGHTAAGFVPARSDYDGFDLSADRANAVRQILEREGLPPSHIFAVSGK 240 APL ATP R++I GHTA+ FVP RSDYDGFDLSADRAN VRQILE+EGLPPSHIFAVSGK Sbjct: 181 APLTATPFRISITGHTASNFVPMRSDYDGFDLSADRANVVRQILEQEGLPPSHIFAVSGK 240 Query: 241 ADGQPLFPDDPTLPANRRVTITLMRENPPLPPDLKP 276 +D PLFPDDP+L ANRRVTITLMRE PPLPP+LKP Sbjct: 241 SDSMPLFPDDPSLAANRRVTITLMREAPPLPPNLKP 276 >ref|YP_001206633.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS 278] emb|CAL78416.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS 278] Length = 276 Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust. Identities = 232/266 (87%), Positives = 248/266 (93%) Query: 1 MAKKKRGDAHTGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDAFGVQT 60 MAKKKRGDAH GGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMR+AFGVQ+ Sbjct: 1 MAKKKRGDAHGGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMREAFGVQS 60 Query: 61 NVRYSGIVESDGLPTRPKLKNVEHISPEDSSANPTPDEKERSQINGARLKIDREFALASA 120 RYSGIVESDGLPTRPKLKN HISPE++S P+P+++ER NGA+LK DR+FALASA Sbjct: 61 ESRYSGIVESDGLPTRPKLKNAAHISPEETSREPSPEQEERQHTNGAKLKTDRQFALASA 120 Query: 121 SLRQALQDMPELTEISKNIMFEETKEGLNLEIVDQDGRSMFADGSREPYDRTRRLIQKLA 180 SLRQALQDMPE+TEISK+IMFEETK+GLNLEIVDQDGRSMFADGS+ PYDRTRRLI+KLA Sbjct: 121 SLRQALQDMPEMTEISKHIMFEETKQGLNLEIVDQDGRSMFADGSKTPYDRTRRLIEKLA 180 Query: 181 APLKATPLRVAIVGHTAAGFVPARSDYDGFDLSADRANAVRQILEREGLPPSHIFAVSGK 240 APLKATPLRV I GHTAAGFVPARSDY FDLSADRANAVRQILEREGLPPSHIFAVSGK Sbjct: 181 APLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHIFAVSGK 240 Query: 241 ADGQPLFPDDPTLPANRRVTITLMRE 266 AD QPLFPDDP+L ANRRVTITLMRE Sbjct: 241 ADTQPLFPDDPSLAANRRVTITLMRE 266 >ref|YP_001239510.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1] gb|ABQ35604.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1] Length = 276 Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust. Identities = 229/266 (86%), Positives = 248/266 (93%) Query: 1 MAKKKRGDAHTGGHGWFVTFADLMGLMMSFFVMLVAFSTMDNNKLKIVAGSMRDAFGVQT 60 MAKKKRGDAH GGHGWFVTFADLMGL++SFFVMLVAFSTMDNNKLK+VAGSMRDAFGVQ+ Sbjct: 1 MAKKKRGDAHGGGHGWFVTFADLMGLLVSFFVMLVAFSTMDNNKLKVVAGSMRDAFGVQS 60 Query: 61 NVRYSGIVESDGLPTRPKLKNVEHISPEDSSANPTPDEKERSQINGARLKIDREFALASA 120 RYSGIVESDGLPTRPKLKN H+SPE++S P+P+++ER NGA+LK DR+FALASA Sbjct: 61 ESRYSGIVESDGLPTRPKLKNAAHVSPEETSREPSPEQEERQHTNGAKLKTDRQFALASA 120 Query: 121 SLRQALQDMPELTEISKNIMFEETKEGLNLEIVDQDGRSMFADGSREPYDRTRRLIQKLA 180 SLRQALQDMPE+TEISK+IMFEETK+GLNLEIVDQDGRSMFADGS+ PYDRTRRLI+KLA Sbjct: 121 SLRQALQDMPEMTEISKHIMFEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRRLIEKLA 180 Query: 181 APLKATPLRVAIVGHTAAGFVPARSDYDGFDLSADRANAVRQILEREGLPPSHIFAVSGK 240 APLKATPLRV I GHTAAGFVPARSDY FDLSADRANAVRQILEREGLPPSHIFAVSGK Sbjct: 181 APLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHIFAVSGK 240 Query: 241 ADGQPLFPDDPTLPANRRVTITLMRE 266 AD QPLFPDDP+L ANRRVTITLMRE Sbjct: 241 ADTQPLFPDDPSLAANRRVTITLMRE 266