BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0149.p (152 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768853.1| hypothetical protein bll2213 [Bradyrhizobium ja... 137 4e-31 ref|ZP_07025779.1| conserved hypothetical protein [Afipia sp. 1N... 105 3e-21 ref|YP_004634332.1| hypothetical protein OCA5_pOC16700160 [Oligo... 100 8e-20 ref|YP_002290598.1| hypothetical protein OCAR_7635 [Oligotropha ... 99 2e-19 ref|YP_004631472.1| hypothetical protein OCA5_c05070 [Oligotroph... 99 2e-19 >ref|NP_768853.1| hypothetical protein bll2213 [Bradyrhizobium japonicum USDA 110] dbj|BAC47478.1| bll2213 [Bradyrhizobium japonicum USDA 110] Length = 198 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 84/153 (54%), Positives = 97/153 (63%), Gaps = 7/153 (4%) Query: 1 VLVRLTRTRRVRAGCSIILAYLFCVLAPSFALAFG-APFPCLTDEVQPAAAAHVHAASTP 59 +L+RLTR+ R+R G I LAYLFCVLAP+ +LA+G P PCL D + A VH TP Sbjct: 52 MLLRLTRSMRIRVGRIIALAYLFCVLAPAASLAWGNGPAPCLDDALL-ADVVPVHH-QTP 109 Query: 60 MAHAEGVAHDHAAHDHGGMHMHHAADGAEPPVKHSHDGKTAPGPCCALMCASALPADLPL 119 H HD A+HDH G H H + P H HDGK GPCCA+MC SALPADLP+ Sbjct: 110 AGHM----HDGASHDHAGPHAHPQTAAQDAPAPHHHDGKGTVGPCCAMMCVSALPADLPV 165 Query: 120 VAGPLHPIATRLAEAFQSLRSEAPARLYRPPIA 152 VA PL PI+ E SLRSEAP LYRPPIA Sbjct: 166 VAKPLQPISACAPEIVASLRSEAPPLLYRPPIA 198 >ref|ZP_07025779.1| conserved hypothetical protein [Afipia sp. 1NLS2] gb|EFI52921.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 158 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/160 (44%), Positives = 85/160 (53%), Gaps = 14/160 (8%) Query: 1 VLVRLTRTRRVRAGCSIILAYLFCVLAPSFALAF----GAPFPCLTDEVQPAAAAHVHAA 56 +LV LTRT+RV+AG I LAYLFCVLAP+ + A AP+ CLTDE A HVH Sbjct: 1 MLVGLTRTQRVKAGWLIALAYLFCVLAPTLSFALPGSQAAPY-CLTDEDHVPAMLHVHQE 59 Query: 57 STPMAHAEGVAHDHAAHDHGGMHMHHAADGAEPPVKHSHDGK------TAPGPCCALMCA 110 H +G AH H+ H +AD PV D A G CC LMC Sbjct: 60 GMMHVHNDGHAHHHSGVQ---THADSSADHDVKPVALKSDSGPAKAPHAADGKCCGLMCV 116 Query: 111 SALPADLPLVAGPLHPIATRLAEAFQSLRSEAPARLYRPP 150 +ALPA L VA P P A R+++ + L AP RLYRPP Sbjct: 117 TALPATLVAVAKPSVPSAVRISDVHRKLADNAPPRLYRPP 156 >ref|YP_004634332.1| hypothetical protein OCA5_pOC16700160 [Oligotropha carboxidovorans OM5] gb|AEI04586.1| hypothetical protein OCA4_pOC167B00160 [Oligotropha carboxidovorans OM4] gb|AEI08215.1| hypothetical protein OCA5_pOC16700160 [Oligotropha carboxidovorans OM5] Length = 158 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 84/160 (52%), Gaps = 14/160 (8%) Query: 1 VLVRLTRTRRVRAGCSIILAYLFCVLAPSFALAF----GAPFPCLTDEVQPAAAAHVHAA 56 +LV LTRT+R RAG + LAYLFCVLAP+ + A P+ CLTDE AH H Sbjct: 1 MLVGLTRTQRRRAGWFVALAYLFCVLAPTLSFALPGSQATPY-CLTDEDHVPGMAHDHHE 59 Query: 57 STPMAHAEGVAHDHAAHDHGGMHMHHAADGAEPPVKHSHDGK------TAPGPCCALMCA 110 H +G AH H+ +H +AD PV D A G CC LMC Sbjct: 60 GAMHVHKDGHAHHHSG---VQVHADSSADHDAKPVALKSDAGPVKAPHAADGKCCGLMCV 116 Query: 111 SALPADLPLVAGPLHPIATRLAEAFQSLRSEAPARLYRPP 150 +ALPA L VA P P A R+++ + L AP+RLYRPP Sbjct: 117 TALPATLVTVAKPPVPNAVRVSDNHRKLADNAPSRLYRPP 156 >ref|YP_002290598.1| hypothetical protein OCAR_7635 [Oligotropha carboxidovorans OM5] gb|ACI94733.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] Length = 186 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 84/160 (52%), Gaps = 14/160 (8%) Query: 1 VLVRLTRTRRVRAGCSIILAYLFCVLAPSFALAF----GAPFPCLTDEVQPAAAAHVHAA 56 +LV LTRT+R RAG + LAYLFCVLAP+ ++A P+ CLTDE AH H Sbjct: 29 MLVGLTRTQRRRAGWFVALAYLFCVLAPTLSIALPGSQATPY-CLTDEDHVPGMAHDHHE 87 Query: 57 STPMAHAEGVAHDHAAHDHGGMHMHHAADGAEPPVKHSHDGK------TAPGPCCALMCA 110 H +G AH H+ +H +AD PV D A G CC L C Sbjct: 88 GAMHVHKDGHAHHHSG---VQVHADSSADHDAKPVALKSDAGPVKAPHAADGKCCGLTCV 144 Query: 111 SALPADLPLVAGPLHPIATRLAEAFQSLRSEAPARLYRPP 150 +ALPA L VA P P A R+++ + L AP+RLYRPP Sbjct: 145 TALPATLVTVAKPPVPNAVRVSDNHRKLADNAPSRLYRPP 184 >ref|YP_004631472.1| hypothetical protein OCA5_c05070 [Oligotropha carboxidovorans OM5] gb|AEI01656.1| hypothetical protein OCA4_c05060 [Oligotropha carboxidovorans OM4] gb|AEI05231.1| hypothetical protein OCA5_c05070 [Oligotropha carboxidovorans OM5] Length = 158 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 84/160 (52%), Gaps = 14/160 (8%) Query: 1 VLVRLTRTRRVRAGCSIILAYLFCVLAPSFALAF----GAPFPCLTDEVQPAAAAHVHAA 56 +LV LTRT+R RAG + LAYLFCVLAP+ ++A P+ CLTDE AH H Sbjct: 1 MLVGLTRTQRRRAGWFVALAYLFCVLAPTLSIALPGSQATPY-CLTDEDHVPGMAHDHHE 59 Query: 57 STPMAHAEGVAHDHAAHDHGGMHMHHAADGAEPPVKHSHDGK------TAPGPCCALMCA 110 H +G AH H+ +H +AD PV D A G CC L C Sbjct: 60 GAMHVHKDGHAHHHSG---VQVHADSSADHDAKPVALKSDAGPVKAPHAADGKCCGLTCV 116 Query: 111 SALPADLPLVAGPLHPIATRLAEAFQSLRSEAPARLYRPP 150 +ALPA L VA P P A R+++ + L AP+RLYRPP Sbjct: 117 TALPATLVTVAKPPVPNAVRVSDNHRKLADNAPSRLYRPP 156