BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0136.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_570163.1| NUDIX hydrolase [Rhodopseudomonas palustris Bis... 427 e-118 ref|NP_771754.1| hypothetical protein blr5114 [Bradyrhizobium ja... 408 e-112 ref|YP_001240668.1| putative NUDIX hydrolase [Bradyrhizobium sp.... 404 e-111 ref|YP_001206469.1| putative NUDIX hydrolase [Bradyrhizobium sp.... 400 e-110 ref|YP_486032.1| NUDIX hydrolase [Rhodopseudomonas palustris HaA... 397 e-109 >ref|YP_570163.1| NUDIX hydrolase [Rhodopseudomonas palustris BisB5] gb|ABE40262.1| NUDIX hydrolase [Rhodopseudomonas palustris BisB5] Length = 251 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/240 (86%), Positives = 218/240 (90%) Query: 8 AAVVHQGEKEADHHAYFRPKDAATLILIDRSGAKPKVLVGKRHDKVVFMPGKFVFPGGRV 67 A V QGEKEADHH YFRPKDAATLIL+DRSG+ PKVLVGKRHDKVVFMPGKFVFPGGRV Sbjct: 9 ANTVEQGEKEADHHPYFRPKDAATLILVDRSGSIPKVLVGKRHDKVVFMPGKFVFPGGRV 68 Query: 68 DKADNRVPVAAPITPELEANLLKGSPKITTGRARALANAAIREACEETGLCLGRKVEKSH 127 DK DNRVPVAAPI ELEANLLKGSP+ITT RARALA AAIREACEETGLCLGRK + + Sbjct: 69 DKVDNRVPVAAPIPLELEANLLKGSPRITTSRARALAVAAIREACEETGLCLGRKADAAS 128 Query: 128 KLEGPWAPFADAGLLPDPSGLFLIARAITPPGRVRRFDTRFFTADASTIAHRVEGVVHAD 187 +L GPW PF DAGLLPDPSGLFLIARAITPPGRVRRFDTRFFTADAS IAHRVEGV+H D Sbjct: 129 RLNGPWQPFTDAGLLPDPSGLFLIARAITPPGRVRRFDTRFFTADASAIAHRVEGVIHPD 188 Query: 188 AELVELVWVEIGSEPLADAHAMTKNVLAELDRRLATGPLRHDAPVPFFHFYGGKMQKDVL 247 AELVELVWVE+GS PLAD HAMTKNVL EL RRLATGPLRHD+PVPFFHFYGG+MQKD+L Sbjct: 189 AELVELVWVELGSSPLADLHAMTKNVLGELQRRLATGPLRHDSPVPFFHFYGGRMQKDIL 248 >ref|NP_771754.1| hypothetical protein blr5114 [Bradyrhizobium japonicum USDA 110] dbj|BAC50379.1| blr5114 [Bradyrhizobium japonicum USDA 110] Length = 250 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 205/248 (82%), Positives = 218/248 (87%), Gaps = 2/248 (0%) Query: 2 TEAAAPAAVVHQGEKEADHHAYFRPKDAATLILIDRSGAKPKVLVGKRHDKVVFMPGKFV 61 T AA A +H+G KEADHH YFRPKDAATLIL+DRSGA PKVLVGKRHDKVVFMPGKFV Sbjct: 4 TLQAAEKAKIHEG-KEADHHPYFRPKDAATLILVDRSGAVPKVLVGKRHDKVVFMPGKFV 62 Query: 62 FPGGRVDKADNRVPVAAPITPELEANLLKGSPKITTGRARALANAAIREACEETGLCLGR 121 FPGGRVDKAD RVP AAPIT ELEANL KGSPK RA++LA AAIREACEETGLCLGR Sbjct: 63 FPGGRVDKADYRVPCAAPITSELEANLAKGSPKTPASRAKSLAIAAIREACEETGLCLGR 122 Query: 122 KVE-KSHKLEGPWAPFADAGLLPDPSGLFLIARAITPPGRVRRFDTRFFTADASTIAHRV 180 K E K+ KL+ W PFADAGLLPDPSGLFLIARAITPPGRV+RFDTRFFTADAS I HRV Sbjct: 123 KAEGKAPKLDSAWKPFADAGLLPDPSGLFLIARAITPPGRVKRFDTRFFTADASAITHRV 182 Query: 181 EGVVHADAELVELVWVEIGSEPLADAHAMTKNVLAELDRRLATGPLRHDAPVPFFHFYGG 240 EGV+HADAELVELVWVE+GS+PLAD H MT+NVL ELD RLATGPLRHDAPVPFFHFYGG Sbjct: 183 EGVIHADAELVELVWVELGSKPLADLHPMTRNVLNELDTRLATGPLRHDAPVPFFHFYGG 242 Query: 241 KMQKDVLG 248 KMQKD+L Sbjct: 243 KMQKDILS 250 >ref|YP_001240668.1| putative NUDIX hydrolase [Bradyrhizobium sp. BTAi1] gb|ABQ36762.1| putative NUDIX hydrolase [Bradyrhizobium sp. BTAi1] Length = 256 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/239 (82%), Positives = 216/239 (90%), Gaps = 5/239 (2%) Query: 15 EKEADHHAYFRPKDAATLILIDRSGAKPKVLVGKRHDKVVFMPGKFVFPGGRVDKADNRV 74 EKEADHH Y +P+DAATLIL+DRSGA PKVLVGKRHDKVVFMPGKFVFPGGRVDK D+R+ Sbjct: 17 EKEADHHPYTKPRDAATLILVDRSGAVPKVLVGKRHDKVVFMPGKFVFPGGRVDKTDHRI 76 Query: 75 PVAAPITPELEANLLKGSPKITTGRARALANAAIREACEETGLCLGRKVEKSH-----KL 129 PVAAP+ ELEANL KG P+ T RA++LA AAIREACEETGLCLGRK+++S +L Sbjct: 77 PVAAPMPAELEANLFKGKPQTTASRAKSLAVAAIREACEETGLCLGRKIDRSAPKLDGQL 136 Query: 130 EGPWAPFADAGLLPDPSGLFLIARAITPPGRVRRFDTRFFTADASTIAHRVEGVVHADAE 189 +GPWAPFA+AGLLPDPSGL+LIARAITPPGR++RFDTRFFTADAS I HRVEGVVHADAE Sbjct: 137 KGPWAPFAEAGLLPDPSGLYLIARAITPPGRIKRFDTRFFTADASAITHRVEGVVHADAE 196 Query: 190 LVELVWVEIGSEPLADAHAMTKNVLAELDRRLATGPLRHDAPVPFFHFYGGKMQKDVLG 248 LVELVWVE+GS+PLAD H MTKNVL ELDRRLATGPLRHDAPVPFFHFYGGKMQKDVLG Sbjct: 197 LVELVWVELGSKPLADLHPMTKNVLNELDRRLATGPLRHDAPVPFFHFYGGKMQKDVLG 255 >ref|YP_001206469.1| putative NUDIX hydrolase [Bradyrhizobium sp. ORS 278] emb|CAL78249.1| putative NUDIX hydrolase [Bradyrhizobium sp. ORS 278] Length = 252 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/249 (79%), Positives = 217/249 (87%), Gaps = 1/249 (0%) Query: 2 TEAAAPAAVVHQGEKEADHHAYFRPKDAATLILIDRSGAKPKVLVGKRHDKVVFMPGKFV 61 T A A EKEADHH Y +P+DAATLIL+DRSGA PKVLVGKRHDKVVFMPGKFV Sbjct: 4 TAQATSAPAGKPAEKEADHHPYTKPRDAATLILVDRSGAVPKVLVGKRHDKVVFMPGKFV 63 Query: 62 FPGGRVDKADNRVPVAAPITPELEANLLKGSPKITTGRARALANAAIREACEETGLCLGR 121 FPGGRVDK D+R+PVAAP+ ELEANL KG P+ T RA++LA AAIREACEETGLCLGR Sbjct: 64 FPGGRVDKTDHRIPVAAPMPAELEANLFKGKPQTTPSRAKSLAIAAIREACEETGLCLGR 123 Query: 122 KVE-KSHKLEGPWAPFADAGLLPDPSGLFLIARAITPPGRVRRFDTRFFTADASTIAHRV 180 K+ + KL+GPW PFA+AGLLPDPSGLFLIARAITPPGR++RFDTRFFTADAS I HRV Sbjct: 124 KINGPAPKLDGPWTPFAEAGLLPDPSGLFLIARAITPPGRIKRFDTRFFTADASAITHRV 183 Query: 181 EGVVHADAELVELVWVEIGSEPLADAHAMTKNVLAELDRRLATGPLRHDAPVPFFHFYGG 240 +GV+HADAELVELVWVE+GS+PLAD H MTKNVL ELD+RLATGPLRHDAPVPFFHFYGG Sbjct: 184 DGVIHADAELVELVWVELGSKPLADLHPMTKNVLHELDKRLATGPLRHDAPVPFFHFYGG 243 Query: 241 KMQKDVLGA 249 KMQKDVLGA Sbjct: 244 KMQKDVLGA 252 >ref|YP_486032.1| NUDIX hydrolase [Rhodopseudomonas palustris HaA2] gb|ABD07121.1| NUDIX hydrolase [Rhodopseudomonas palustris HaA2] Length = 252 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 210/249 (84%), Positives = 222/249 (89%), Gaps = 2/249 (0%) Query: 1 MTEAAAPAA-VVHQGEKEADHHAYFRPKDAATLILIDRSGAKPKVLVGKRHDKVVFMPGK 59 M+E AA V QGEKEADHH YFRPKDAATLIL+DRSG+ PKVLVG+RHDKVVFMPGK Sbjct: 1 MSETVTQAAHTVEQGEKEADHHPYFRPKDAATLILVDRSGSIPKVLVGRRHDKVVFMPGK 60 Query: 60 FVFPGGRVDKADNRVPVAAPITPELEANLLKGSPKITTGRARALANAAIREACEETGLCL 119 FVFPGGRVDK DNRVPVAA I PELEANLLKGSP+IT RARALA AAIREACEETGLCL Sbjct: 61 FVFPGGRVDKFDNRVPVAAQIPPELEANLLKGSPRITPARARALAIAAIREACEETGLCL 120 Query: 120 GRKVEKSH-KLEGPWAPFADAGLLPDPSGLFLIARAITPPGRVRRFDTRFFTADASTIAH 178 G K + + L+GPW PFA+AGLLPDPSGL+LIARAITPPGRVRRFDTRFFTADAS IAH Sbjct: 121 GCKADGAKTNLDGPWQPFAEAGLLPDPSGLYLIARAITPPGRVRRFDTRFFTADASAIAH 180 Query: 179 RVEGVVHADAELVELVWVEIGSEPLADAHAMTKNVLAELDRRLATGPLRHDAPVPFFHFY 238 RVEGVVHADAELVELVWVE+GS PLAD HAMTKNVL EL RRLATGPLRHDAPVPFFHFY Sbjct: 181 RVEGVVHADAELVELVWVELGSSPLADLHAMTKNVLGELHRRLATGPLRHDAPVPFFHFY 240 Query: 239 GGKMQKDVL 247 GGKMQKD+L Sbjct: 241 GGKMQKDLL 249