BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0118.p (398 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08627659.1| enolase superfamily protein [Bradyrhizobiacea... 731 0.0 pdb|1TZZ|A Chain A, Crystal Structure Of The Protein L1841, Unkn... 730 0.0 ref|NP_773370.1| hypothetical protein bll6730 [Bradyrhizobium ja... 730 0.0 pdb|2DW6|A Chain A, Crystal Structure Of The Mutant K184a Of D-T... 728 0.0 ref|ZP_07027197.1| Mandelate racemase/muconate lactonizing prote... 717 0.0 >ref|ZP_08627659.1| enolase superfamily protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09563.1| enolase superfamily protein [Bradyrhizobiaceae bacterium SG-6C] Length = 389 Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/388 (90%), Positives = 366/388 (94%) Query: 10 MSARIVDVREVTKPISSPIRNAYIDFTKMTSSLVAVVTDVVRDGKRVVGYGFNSNGRYGQ 69 MS RIVD+RE+TKPISSPIRNAYIDFTKMT+SLVAVVTDVVRDG+RVVGYGFNSNGRYGQ Sbjct: 1 MSVRIVDIREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVRDGRRVVGYGFNSNGRYGQ 60 Query: 70 GGLIRERFAPRLKEADPKSLLDADGGNLDPDKVWSTLMSNEKPGGHGERSVAVGTIDMAV 129 GGLIRERFA RL EADPK+LLDA G N+DPDK W+ LMSNEKPGGHGERSVAVGTIDMA+ Sbjct: 61 GGLIRERFASRLLEADPKTLLDASGDNIDPDKAWAVLMSNEKPGGHGERSVAVGTIDMAI 120 Query: 130 WDAVAKIAGKPLFRLLAERHGLSANPRVFVYAAGGYYYPGKDLGALRKEMRGYLDRGYNV 189 WDAVAKIAGKPLFRLLAERH A+PRVFVYAAGGYYYPGKD ALR EMRGYLDRGYNV Sbjct: 121 WDAVAKIAGKPLFRLLAERHNRKADPRVFVYAAGGYYYPGKDNSALRAEMRGYLDRGYNV 180 Query: 190 VKMKIGGAPLAEDRERIEAVLKEIGSAAQLAVDANGRFDLETAIAYAKMLREYPLFWYEE 249 VKMKIGGA LAEDR RIEAVLKEIGS AQLAVDANGRFDLETAIAYAKMLR+YPLFWYEE Sbjct: 181 VKMKIGGASLAEDRARIEAVLKEIGSQAQLAVDANGRFDLETAIAYAKMLRDYPLFWYEE 240 Query: 250 AGDPLDYALQAALAEFYPGAMATGENLFSHQDARNLIRYGGMRPDRDWLQFDCALSYGLC 309 AGDPLDY LQA+LAEFYPG MATGENLFSH DARNLIRYGGMRPDRDWLQFDCALSYGLC Sbjct: 241 AGDPLDYHLQASLAEFYPGPMATGENLFSHHDARNLIRYGGMRPDRDWLQFDCALSYGLC 300 Query: 310 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 369 EY RTL+VLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE Sbjct: 301 EYLRTLDVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 360 Query: 370 GGHIVMPDLPGIGFEGKSDLYKEMKALA 397 GHI MPDLPGIGFEGK+DLY+EMKALA Sbjct: 361 SGHITMPDLPGIGFEGKADLYREMKALA 388 >pdb|1TZZ|A Chain A, Crystal Structure Of The Protein L1841, Unknown Member Of Enolase Superfamily From Bradyrhizobium Japonicum pdb|1TZZ|B Chain B, Crystal Structure Of The Protein L1841, Unknown Member Of Enolase Superfamily From Bradyrhizobium Japonicum Length = 392 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/389 (90%), Positives = 366/389 (94%) Query: 10 MSARIVDVREVTKPISSPIRNAYIDFTKMTSSLVAVVTDVVRDGKRVVGYGFNSNGRYGQ 69 MS RIVDVRE+TKPISSPIRNAYIDFTKMT+SLVAVVTDVVR+GKRVVGYGFNSNGRYGQ Sbjct: 4 MSVRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNSNGRYGQ 63 Query: 70 GGLIRERFAPRLKEADPKSLLDADGGNLDPDKVWSTLMSNEKPGGHGERSVAVGTIDMAV 129 GGLIRERFA R+ EADPK LL+ G NLDPDKVW+ +M NEKPGGHGERSVAVGTIDMAV Sbjct: 64 GGLIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAV 123 Query: 130 WDAVAKIAGKPLFRLLAERHGLSANPRVFVYAAGGYYYPGKDLGALRKEMRGYLDRGYNV 189 WDAVAKIAGKPLFRLLAERHG+ ANPRVFVYAAGGYYYPGK L LR EMRGYLDRGYNV Sbjct: 124 WDAVAKIAGKPLFRLLAERHGVKANPRVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNV 183 Query: 190 VKMKIGGAPLAEDRERIEAVLKEIGSAAQLAVDANGRFDLETAIAYAKMLREYPLFWYEE 249 VKMKIGGAP+ EDR RIEAVL+EIG AQLAVDANGRF+LET IAYAKMLR+YPLFWYEE Sbjct: 184 VKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYEE 243 Query: 250 AGDPLDYALQAALAEFYPGAMATGENLFSHQDARNLIRYGGMRPDRDWLQFDCALSYGLC 309 GDPLDYALQAALAEFYPG MATGENLFSHQDARNL+RYGGMRPDRDWLQFDCALSYGLC Sbjct: 244 VGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLC 303 Query: 310 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 369 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE Sbjct: 304 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 363 Query: 370 GGHIVMPDLPGIGFEGKSDLYKEMKALAD 398 GHI MPDLPGIGFEGKSDLYKEMKALA+ Sbjct: 364 NGHITMPDLPGIGFEGKSDLYKEMKALAE 392 >ref|NP_773370.1| hypothetical protein bll6730 [Bradyrhizobium japonicum USDA 110] pdb|2DW7|A Chain A, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|B Chain B, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|C Chain C, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|D Chain D, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|E Chain E, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|F Chain F, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|G Chain G, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|H Chain H, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|I Chain I, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|J Chain J, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|K Chain K, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|L Chain L, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|M Chain M, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|N Chain N, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|O Chain O, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate pdb|2DW7|P Chain P, Crystal Structure Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And Meso- Tartrate dbj|BAC51995.1| bll6730 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/389 (90%), Positives = 366/389 (94%) Query: 10 MSARIVDVREVTKPISSPIRNAYIDFTKMTSSLVAVVTDVVRDGKRVVGYGFNSNGRYGQ 69 MS RIVDVRE+TKPISSPIRNAYIDFTKMT+SLVAVVTDVVR+GKRVVGYGFNSNGRYGQ Sbjct: 1 MSVRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNSNGRYGQ 60 Query: 70 GGLIRERFAPRLKEADPKSLLDADGGNLDPDKVWSTLMSNEKPGGHGERSVAVGTIDMAV 129 GGLIRERFA R+ EADPK LL+ G NLDPDKVW+ +M NEKPGGHGERSVAVGTIDMAV Sbjct: 61 GGLIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAV 120 Query: 130 WDAVAKIAGKPLFRLLAERHGLSANPRVFVYAAGGYYYPGKDLGALRKEMRGYLDRGYNV 189 WDAVAKIAGKPLFRLLAERHG+ ANPRVFVYAAGGYYYPGK L LR EMRGYLDRGYNV Sbjct: 121 WDAVAKIAGKPLFRLLAERHGVKANPRVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNV 180 Query: 190 VKMKIGGAPLAEDRERIEAVLKEIGSAAQLAVDANGRFDLETAIAYAKMLREYPLFWYEE 249 VKMKIGGAP+ EDR RIEAVL+EIG AQLAVDANGRF+LET IAYAKMLR+YPLFWYEE Sbjct: 181 VKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYEE 240 Query: 250 AGDPLDYALQAALAEFYPGAMATGENLFSHQDARNLIRYGGMRPDRDWLQFDCALSYGLC 309 GDPLDYALQAALAEFYPG MATGENLFSHQDARNL+RYGGMRPDRDWLQFDCALSYGLC Sbjct: 241 VGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLC 300 Query: 310 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 369 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE Sbjct: 301 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 360 Query: 370 GGHIVMPDLPGIGFEGKSDLYKEMKALAD 398 GHI MPDLPGIGFEGKSDLYKEMKALA+ Sbjct: 361 NGHITMPDLPGIGFEGKSDLYKEMKALAE 389 >pdb|2DW6|A Chain A, Crystal Structure Of The Mutant K184a Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And D-Tartrate pdb|2DW6|B Chain B, Crystal Structure Of The Mutant K184a Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And D-Tartrate pdb|2DW6|C Chain C, Crystal Structure Of The Mutant K184a Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And D-Tartrate pdb|2DW6|D Chain D, Crystal Structure Of The Mutant K184a Of D-Tartrate Dehydratase From Bradyrhizobium Japonicum Complexed With Mg++ And D-Tartrate Length = 389 Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/389 (90%), Positives = 365/389 (93%) Query: 10 MSARIVDVREVTKPISSPIRNAYIDFTKMTSSLVAVVTDVVRDGKRVVGYGFNSNGRYGQ 69 MS RIVDVRE+TKPISSPIRNAYIDFTKMT+SLVAVVTDVVR+GKRVVGYGFNSNGRYGQ Sbjct: 1 MSVRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNSNGRYGQ 60 Query: 70 GGLIRERFAPRLKEADPKSLLDADGGNLDPDKVWSTLMSNEKPGGHGERSVAVGTIDMAV 129 GGLIRERFA R+ EADPK LL+ G NLDPDKVW+ +M NEKPGGHGERSVAVGTIDMAV Sbjct: 61 GGLIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAV 120 Query: 130 WDAVAKIAGKPLFRLLAERHGLSANPRVFVYAAGGYYYPGKDLGALRKEMRGYLDRGYNV 189 WDAVAKIAGKPLFRLLAERHG+ ANPRVFVYAAGGYYYPGK L LR EMRGYLDRGYNV Sbjct: 121 WDAVAKIAGKPLFRLLAERHGVKANPRVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNV 180 Query: 190 VKMKIGGAPLAEDRERIEAVLKEIGSAAQLAVDANGRFDLETAIAYAKMLREYPLFWYEE 249 VKM IGGAP+ EDR RIEAVL+EIG AQLAVDANGRF+LET IAYAKMLR+YPLFWYEE Sbjct: 181 VKMAIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYEE 240 Query: 250 AGDPLDYALQAALAEFYPGAMATGENLFSHQDARNLIRYGGMRPDRDWLQFDCALSYGLC 309 GDPLDYALQAALAEFYPG MATGENLFSHQDARNL+RYGGMRPDRDWLQFDCALSYGLC Sbjct: 241 VGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLC 300 Query: 310 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 369 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE Sbjct: 301 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 360 Query: 370 GGHIVMPDLPGIGFEGKSDLYKEMKALAD 398 GHI MPDLPGIGFEGKSDLYKEMKALA+ Sbjct: 361 NGHITMPDLPGIGFEGKSDLYKEMKALAE 389 >ref|ZP_07027197.1| Mandelate racemase/muconate lactonizing protein [Afipia sp. 1NLS2] gb|EFI50953.1| Mandelate racemase/muconate lactonizing protein [Afipia sp. 1NLS2] Length = 389 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/388 (89%), Positives = 362/388 (93%) Query: 10 MSARIVDVREVTKPISSPIRNAYIDFTKMTSSLVAVVTDVVRDGKRVVGYGFNSNGRYGQ 69 M+ RIVD+REVTKPI+SPIRNAYIDF+KMTSSLVAVVT+VVRDGK VVGYGFNSNGRYGQ Sbjct: 1 MTVRIVDIREVTKPIASPIRNAYIDFSKMTSSLVAVVTNVVRDGKTVVGYGFNSNGRYGQ 60 Query: 70 GGLIRERFAPRLKEADPKSLLDADGGNLDPDKVWSTLMSNEKPGGHGERSVAVGTIDMAV 129 GGLIRERFA R+ EADPK+LLD G NLDP KVW+TLM+NEKPGGHGERSVAVGTIDMAV Sbjct: 61 GGLIRERFAQRVLEADPKTLLDESGDNLDPHKVWATLMTNEKPGGHGERSVAVGTIDMAV 120 Query: 130 WDAVAKIAGKPLFRLLAERHGLSANPRVFVYAAGGYYYPGKDLGALRKEMRGYLDRGYNV 189 WDAVAKIAGKPLFRLLAERH ANPRVFVYAAGGYYYPGKD ALR EMRGYLDRGYNV Sbjct: 121 WDAVAKIAGKPLFRLLAERHKREANPRVFVYAAGGYYYPGKDNSALRAEMRGYLDRGYNV 180 Query: 190 VKMKIGGAPLAEDRERIEAVLKEIGSAAQLAVDANGRFDLETAIAYAKMLREYPLFWYEE 249 VK+KIGGAPL EDR+RIEAVLKEIGS AQLAVDANGRFDLET +AYAKMLR+YPLFWYEE Sbjct: 181 VKIKIGGAPLEEDRQRIEAVLKEIGSGAQLAVDANGRFDLETGMAYAKMLRDYPLFWYEE 240 Query: 250 AGDPLDYALQAALAEFYPGAMATGENLFSHQDARNLIRYGGMRPDRDWLQFDCALSYGLC 309 GDPLD+ LQAALAEFYPG MATGENLFSHQDARNLIRYGGMRPDRDWLQFDCALSYGL Sbjct: 241 VGDPLDFQLQAALAEFYPGPMATGENLFSHQDARNLIRYGGMRPDRDWLQFDCALSYGLV 300 Query: 310 EYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 369 EY RTL++L HGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE Sbjct: 301 EYLRTLDMLHIHGWSPSRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDGVRVE 360 Query: 370 GGHIVMPDLPGIGFEGKSDLYKEMKALA 397 GHI MPDLPGIGFEGKSDLYKEMKALA Sbjct: 361 NGHITMPDLPGIGFEGKSDLYKEMKALA 388