BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0114.p         (66 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773367.1| major facilitator superfamily transporter [Brad...   104   5e-21
ref|YP_001207663.1| major facilitator superfamily permease [Brad...   104   5e-21
ref|YP_001242112.1| major facilitator superfamily permease [Brad...    99   1e-19
ref|YP_001353347.1| major facilitator transporter [Janthinobacte...    83   1e-14
ref|YP_001101462.1| major facilitator transporter [Herminiimonas...    82   2e-14

>ref|NP_773367.1| major facilitator superfamily transporter [Bradyrhizobium
          japonicum USDA 110]
 dbj|BAC51992.1| major facilitator superfamily transporter [Bradyrhizobium
          japonicum USDA 110]
          Length = 390

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/52 (94%), Positives = 51/52 (98%)

Query: 6  NSPSRVITFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYSELLPYATPGFIA 57
          NSPSRVI+FVNA HFIDHY+MLIFAAAVIIMGPALGMAYSELLPYATPGFIA
Sbjct: 2  NSPSRVISFVNAGHFIDHYSMLIFAAAVIIMGPALGMAYSELLPYATPGFIA 53


>ref|YP_001207663.1| major facilitator superfamily permease [Bradyrhizobium sp. ORS
          278]
 emb|CAL79446.1| putative permease of major facilitator superfamily (MFS)
          (COG0477) [Bradyrhizobium sp. ORS 278]
          Length = 402

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/58 (89%), Positives = 54/58 (93%), Gaps = 1/58 (1%)

Query: 1  MNGPS-NSPSRVITFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYSELLPYATPGFIA 57
          MN PS N PSRVI FVNAAHFIDHYAMLIFAAAVIIMGPALGMAY++LLPYATPGFIA
Sbjct: 1  MNSPSRNRPSRVIGFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYADLLPYATPGFIA 58


>ref|YP_001242112.1| major facilitator superfamily permease [Bradyrhizobium sp. BTAi1]
 gb|ABQ38206.1| putative permease of major facilitator superfamily (MFS)
          [Bradyrhizobium sp. BTAi1]
          Length = 397

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/52 (88%), Positives = 50/52 (96%)

Query: 6  NSPSRVITFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYSELLPYATPGFIA 57
          N+P RVI FVNAAHF+DHYAMLIFAAAVIIMGPALGMAY+ELLPYATPGF+A
Sbjct: 2  NNPRRVIGFVNAAHFVDHYAMLIFAAAVIIMGPALGMAYAELLPYATPGFVA 53


>ref|YP_001353347.1| major facilitator transporter [Janthinobacterium sp. Marseille]
 gb|ABR90881.1| transporter of the MFS superfamily [Janthinobacterium sp.
          Marseille]
          Length = 389

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 42/52 (80%)

Query: 6  NSPSRVITFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYSELLPYATPGFIA 57
          N P  VI ++N AHFIDHYAML+FAAAVI++ P  GM Y ELLPYATPGF+A
Sbjct: 2  NHPRTVIAYINLAHFIDHYAMLVFAAAVIVIAPVFGMTYGELLPYATPGFVA 53


>ref|YP_001101462.1| major facilitator transporter [Herminiimonas arsenicoxydans]
 emb|CAL63341.1| Major facilitator superfamily transporter [Herminiimonas
          arsenicoxydans]
          Length = 389

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 43/52 (82%)

Query: 6  NSPSRVITFVNAAHFIDHYAMLIFAAAVIIMGPALGMAYSELLPYATPGFIA 57
          N+P  VI ++N AHFIDHYAML+FAAAVI+M P   M Y++LLPYATPGFIA
Sbjct: 2  NNPRTVIAYINVAHFIDHYAMLVFAAAVIVMAPVFDMRYADLLPYATPGFIA 53