BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0109.p         (272 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769441.1| formate transporter [Bradyrhizobium japonicum U...   509   e-142
ref|NP_948540.1| formate/nitrate transporter [Rhodopseudomonas p...   500   e-140
ref|YP_001992589.1| formate/nitrite transporter [Rhodopseudomona...   500   e-139
ref|YP_004108555.1| formate/nitrite transporter [Rhodopseudomona...   493   e-137
ref|ZP_07027114.1| formate/nitrite transporter [Afipia sp. 1NLS2...   481   e-134

>ref|NP_769441.1| formate transporter [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48066.1| bll2801 [Bradyrhizobium japonicum USDA 110]
          Length = 300

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 249/268 (92%), Positives = 258/268 (96%)

Query: 1   MAYLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFAVTINVNTGQPLVGA 60
           M+YLAPSEFVTKMVDAGESKIFMSTRDT+IRAYMAGAILALAAWFAVTINVNTGQPLVGA
Sbjct: 22  MSYLAPSEFVTKMVDAGESKIFMSTRDTIIRAYMAGAILALAAWFAVTINVNTGQPLVGA 81

Query: 61  LLFPVGFVMLYLLGFDLLTGVFVLSPLALLDKRPGVTLGGVLRNWALVFIGNFAGALTVA 120
           LLFPVGFVMLYLLGFDLLTGVFVLSPLAL+DKRP VT GGVLRNW LVF+GNFAGA TVA
Sbjct: 82  LLFPVGFVMLYLLGFDLLTGVFVLSPLALIDKRPAVTFGGVLRNWGLVFVGNFAGAFTVA 141

Query: 121 FMMAFVTTFGFTQEPDKVGMTIGNIGEGRTLGYAAHGAAGMATLFIRGMLCNWMVSTGVV 180
           FMMAFVTTFGFTQ+PDK+G  IGNIGEGRTLGYAAHGAAGMATLF+RGMLCNWMVSTGVV
Sbjct: 142 FMMAFVTTFGFTQDPDKIGTAIGNIGEGRTLGYAAHGAAGMATLFLRGMLCNWMVSTGVV 201

Query: 181 GAMISTTVPGKVIAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSIMDYLIWNEIPT 240
           GAMIST+VPGKVIAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSIMDYLIWNEIPT
Sbjct: 202 GAMISTSVPGKVIAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSIMDYLIWNEIPT 261

Query: 241 VLGNLAGGLAFTGLTLYTTHVKTAPKRQ 268
           VLGNL GGLAFTG+TLY THV T PKRQ
Sbjct: 262 VLGNLVGGLAFTGMTLYATHVMTQPKRQ 289


>ref|NP_948540.1| formate/nitrate transporter [Rhodopseudomonas palustris CGA009]
 emb|CAE28642.1| formate/nitrate transporter [Rhodopseudomonas palustris CGA009]
          Length = 279

 Score =  500 bits (1288), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/268 (92%), Positives = 257/268 (95%)

Query: 1   MAYLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFAVTINVNTGQPLVGA 60
           M+YLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFA+TINVNTGQPL+GA
Sbjct: 1   MSYLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFAITINVNTGQPLIGA 60

Query: 61  LLFPVGFVMLYLLGFDLLTGVFVLSPLALLDKRPGVTLGGVLRNWALVFIGNFAGALTVA 120
           LLFPVGF MLYLLGFDLLTGVFVLSPLA LDKRPGVT+GGVLRNW LVFIGNFAGALTVA
Sbjct: 61  LLFPVGFTMLYLLGFDLLTGVFVLSPLAWLDKRPGVTIGGVLRNWGLVFIGNFAGALTVA 120

Query: 121 FMMAFVTTFGFTQEPDKVGMTIGNIGEGRTLGYAAHGAAGMATLFIRGMLCNWMVSTGVV 180
           F+MAFVTTFGFTQ+PDKVG  IGNIGEGRTLGYAAHGAAGM TLF RGMLCNWMVSTGVV
Sbjct: 121 FLMAFVTTFGFTQDPDKVGTAIGNIGEGRTLGYAAHGAAGMVTLFFRGMLCNWMVSTGVV 180

Query: 181 GAMISTTVPGKVIAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSIMDYLIWNEIPT 240
            AMISTTVPGKV+AMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSI+DYLIWNEIPT
Sbjct: 181 MAMISTTVPGKVLAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSILDYLIWNEIPT 240

Query: 241 VLGNLAGGLAFTGLTLYTTHVKTAPKRQ 268
           VLGNL GGLAFTGLTLYTTHV+T  KR+
Sbjct: 241 VLGNLVGGLAFTGLTLYTTHVRTGAKRR 268


>ref|YP_001992589.1| formate/nitrite transporter [Rhodopseudomonas palustris TIE-1]
 gb|ACF02114.1| formate/nitrite transporter [Rhodopseudomonas palustris TIE-1]
          Length = 279

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/268 (92%), Positives = 257/268 (95%)

Query: 1   MAYLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFAVTINVNTGQPLVGA 60
           M+YLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFA+TINVNTGQPL+GA
Sbjct: 1   MSYLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFAITINVNTGQPLIGA 60

Query: 61  LLFPVGFVMLYLLGFDLLTGVFVLSPLALLDKRPGVTLGGVLRNWALVFIGNFAGALTVA 120
           LLFPVGF MLYLLGFDLLTGVFVLSPLA LDKRPGVT+GGVLRNW LVFIGNFAGALTVA
Sbjct: 61  LLFPVGFTMLYLLGFDLLTGVFVLSPLAWLDKRPGVTIGGVLRNWGLVFIGNFAGALTVA 120

Query: 121 FMMAFVTTFGFTQEPDKVGMTIGNIGEGRTLGYAAHGAAGMATLFIRGMLCNWMVSTGVV 180
           F+MAFVTTFGFTQ+PDKVG  IGNIGEGRTLGYAAHGAAGM TLF RGMLCNWMVSTGVV
Sbjct: 121 FLMAFVTTFGFTQDPDKVGTAIGNIGEGRTLGYAAHGAAGMVTLFFRGMLCNWMVSTGVV 180

Query: 181 GAMISTTVPGKVIAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSIMDYLIWNEIPT 240
            AMISTTVPGKV+AMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSI+DYLIWNEIPT
Sbjct: 181 MAMISTTVPGKVLAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSILDYLIWNEIPT 240

Query: 241 VLGNLAGGLAFTGLTLYTTHVKTAPKRQ 268
           VLGNL GGLAFTGLTLYTTHV+T  KR+
Sbjct: 241 VLGNLVGGLAFTGLTLYTTHVRTGAKRR 268


>ref|YP_004108555.1| formate/nitrite transporter [Rhodopseudomonas palustris DX-1]
 gb|ADU43822.1| formate/nitrite transporter [Rhodopseudomonas palustris DX-1]
          Length = 279

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 243/268 (90%), Positives = 255/268 (95%)

Query: 1   MAYLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFAVTINVNTGQPLVGA 60
           M+YLAPSEFVTKMVDAGESKI MSTRDTVIRAYMAGAILALAAWFAVTINVNTGQPL+GA
Sbjct: 1   MSYLAPSEFVTKMVDAGESKILMSTRDTVIRAYMAGAILALAAWFAVTINVNTGQPLIGA 60

Query: 61  LLFPVGFVMLYLLGFDLLTGVFVLSPLALLDKRPGVTLGGVLRNWALVFIGNFAGALTVA 120
           LLFPVGF MLYLLGFDLLTGVFVL+PLA LDKRPG T+GGVLRNW LVFIGNFAGA+TVA
Sbjct: 61  LLFPVGFTMLYLLGFDLLTGVFVLAPLAWLDKRPGCTIGGVLRNWGLVFIGNFAGAVTVA 120

Query: 121 FMMAFVTTFGFTQEPDKVGMTIGNIGEGRTLGYAAHGAAGMATLFIRGMLCNWMVSTGVV 180
           F+MAFVTTFGF+Q PDKVG  +GNIGEGRTLGYAAHGAAGMATLF RG+LCNWMVSTGVV
Sbjct: 121 FLMAFVTTFGFSQAPDKVGTALGNIGEGRTLGYAAHGAAGMATLFFRGVLCNWMVSTGVV 180

Query: 181 GAMISTTVPGKVIAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSIMDYLIWNEIPT 240
            AMISTTVPGKV+AMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSI+DYLIWNEIPT
Sbjct: 181 MAMISTTVPGKVLAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSILDYLIWNEIPT 240

Query: 241 VLGNLAGGLAFTGLTLYTTHVKTAPKRQ 268
           VLGNL GGLAFTGLTLYTTHV+TA KR 
Sbjct: 241 VLGNLVGGLAFTGLTLYTTHVRTAAKRS 268


>ref|ZP_07027114.1| formate/nitrite transporter [Afipia sp. 1NLS2]
 gb|EFI51957.1| formate/nitrite transporter [Afipia sp. 1NLS2]
          Length = 273

 Score =  481 bits (1238), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 234/268 (87%), Positives = 250/268 (93%)

Query: 1   MAYLAPSEFVTKMVDAGESKIFMSTRDTVIRAYMAGAILALAAWFAVTINVNTGQPLVGA 60
           M+YLAPSEFVTKMVDAGESKIFMSTRDT+IRAYMAGAILALAAWFAVTINVNTGQPL GA
Sbjct: 1   MSYLAPSEFVTKMVDAGESKIFMSTRDTLIRAYMAGAILALAAWFAVTINVNTGQPLAGA 60

Query: 61  LLFPVGFVMLYLLGFDLLTGVFVLSPLALLDKRPGVTLGGVLRNWALVFIGNFAGALTVA 120
           +LFPVGF MLYLLGFDLLTGVFVL+PLA L+KRPG TLGGVLRNW LVF+GNF GALTVA
Sbjct: 61  ILFPVGFCMLYLLGFDLLTGVFVLAPLAWLNKRPGCTLGGVLRNWGLVFVGNFGGALTVA 120

Query: 121 FMMAFVTTFGFTQEPDKVGMTIGNIGEGRTLGYAAHGAAGMATLFIRGMLCNWMVSTGVV 180
           FMMAFVTT+GFTQ PDKVG  IGN+GE RTLGYA+HGA GM TLF+RGMLCNWMVSTGVV
Sbjct: 121 FMMAFVTTYGFTQAPDKVGAVIGNVGEARTLGYASHGAMGMITLFMRGMLCNWMVSTGVV 180

Query: 181 GAMISTTVPGKVIAMWMPILVFFYMVFEHSVVNMFLFPSGLMLHAKFSIMDYLIWNEIPT 240
           GAM+STTV GKVIAMWMPI++FFYMVFEHSVVNMFLFP+GLMLHA FS+MDYLIWNEIPT
Sbjct: 181 GAMVSTTVSGKVIAMWMPIMLFFYMVFEHSVVNMFLFPAGLMLHAPFSVMDYLIWNEIPT 240

Query: 241 VLGNLAGGLAFTGLTLYTTHVKTAPKRQ 268
            LGNL GGL+FTGLTLY THVKTAPKR 
Sbjct: 241 ALGNLVGGLSFTGLTLYATHVKTAPKRD 268