BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0099.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773339.1| hypothetical protein blr6699 [Bradyrhizobium ja... 606 e-171 ref|ZP_02187772.1| hypothetical protein BAL199_12236 [alpha prot... 348 7e-94 ref|YP_001631910.1| putative racemase [Bordetella petrii DSM 128... 310 4e-82 ref|YP_726595.1| L-alanine-DL-glutamate epimerase [Ralstonia eut... 286 3e-75 ref|XP_002537545.1| Galactonate dehydratase, putative [Ricinus c... 284 2e-74 >ref|NP_773339.1| hypothetical protein blr6699 [Bradyrhizobium japonicum USDA 110] dbj|BAC51964.1| blr6699 [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 290/367 (79%), Positives = 320/367 (87%) Query: 35 MKITDVRAHHIRIPFDAGPASFRQGASAISALDMVLVEVSTDAGFTGWGDAFAYVCPKTS 94 MKITDVRAH IRIP+DAG ASFRQGASAI+ALDMV+VEV+TDAG TGWGDAFAYVCP+T+ Sbjct: 1 MKITDVRAHQIRIPYDAGVASFRQGASAITALDMVIVEVTTDAGLTGWGDAFAYVCPRTT 60 Query: 95 CTAVAEMIAPQARGLEVPDAASIPAAMEQIQRNLHLFGRYGITMFAISALDIALWDLAGK 154 +AV EMIAPQARGLEVPDAA I A MEQIQRNLHLFGRYGITMFAIS LDIALWDLA K Sbjct: 61 RSAVEEMIAPQARGLEVPDAAGIAAVMEQIQRNLHLFGRYGITMFAISGLDIALWDLAAK 120 Query: 155 VKGVPLHQLIGGAKRSTIPAYASLMRIGNPAHIAAECKKAIKLGYSAIKLHETTVPAVAA 214 +KGVP+H+L+G +R IPAYASL+RIG+P +IAAECKKA+ LGY AIKLHETT PAV A Sbjct: 121 IKGVPVHRLLGETRRPAIPAYASLLRIGSPDNIAAECKKALALGYGAIKLHETTAPAVYA 180 Query: 215 AREAIGPGVPLMVDMNCPLDGPAAIQFARDCKQAAPLFLEEPVWPPEDFATLAEVRREGR 274 AREAIGPGVPLMVDMNCPL G AI FA C+ A P+FLEEPVWPPEDFA LAEVR +G Sbjct: 181 AREAIGPGVPLMVDMNCPLSGEQAIAFAGTCRDAQPMFLEEPVWPPEDFAALAEVRSKGG 240 Query: 275 LDIAAGENACTVHQFRQMMTAGAVSHAQPSVIKVGGITEFLRVAVLADEFGVQVIPHSPY 334 L +AAGENACT HQFRQMM AGAVSHAQPSVIKVGGITEFL+VA LAD GV+++PHSPY Sbjct: 241 LGVAAGENACTEHQFRQMMNAGAVSHAQPSVIKVGGITEFLKVAALADRLGVKIVPHSPY 300 Query: 335 FGPGFLATLHLMAIRDAGLIEVFFMKRPACLWGDRIDVDANGHVAVPQGPGLGYEPDRNV 394 FGPG LATLHL+A RD G +E+F++KR ACLWG R DVDA GHVAVP G GLGYEPDR V Sbjct: 301 FGPGLLATLHLLAGRDDGFVEMFYLKREACLWGGRADVDATGHVAVPTGLGLGYEPDRGV 360 Query: 395 MEQYRVA 401 ME+YRVA Sbjct: 361 MERYRVA 367 >ref|ZP_02187772.1| hypothetical protein BAL199_12236 [alpha proteobacterium BAL199] gb|EDP65426.1| hypothetical protein BAL199_12236 [alpha proteobacterium BAL199] Length = 364 Score = 348 bits (894), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 184/368 (50%), Positives = 239/368 (64%), Gaps = 5/368 (1%) Query: 35 MKITDVRAHHIRIPFDAGPASFRQGASAISALDMVLVEVSTDAGFTGWGDAFAYVCPKTS 94 MKI +V A +R+PF+ + A ALD LV+V+TD G GWGDAF+Y C ++ Sbjct: 1 MKIANVEAVPLRMPFNHAGSDRDVTAGGWPALDFCLVKVTTDTGIVGWGDAFSYHCRESV 60 Query: 95 CTAVAEMIAPQARGLEVPDAASIPAAMEQIQRNLHLFGRYGITMFAISALDIALWDLAGK 154 AV M+ P A G DA I ++Q+ HLFGRYGIT+FA+S LDIALWD+AGK Sbjct: 61 VAAVEHMVKPAAIG---QDARDIAGLNHRLQQKFHLFGRYGITLFALSGLDIALWDIAGK 117 Query: 155 VKGVPLHQLIGGAKRSTIPAYASLMRIGNPAHIAAECKKAIKLGYSAIKLHETTVPAVAA 214 G+PL L+GG T+PAY+SL + + + A+ +++ GY IKLHE V A Sbjct: 118 AAGLPLATLLGGTTDRTLPAYSSLFILRDKEKVMADVWRSLDEGYEYIKLHEIGEVEVGA 177 Query: 215 AREAIGPGVPLMVDMNCPLDGPAAIQFARDCKQAAPLFLEEPVWPPEDFATLAEVRREGR 274 ARE G +P+MVD+NCP AI+ AR Q +LEEPV+PPEDF +LA VR E Sbjct: 178 AREVAGESIPIMVDVNCPWTPEQAIRMARKLDQFELHWLEEPVFPPEDFNSLARVRGETG 237 Query: 275 LDIAAGENACTVHQFRQMMTAGAVSHAQPSVIKVGGITEFLRVAVLADEFGVQVIPHSPY 334 + +AAGEN CT QF Q + AGA+ +AQPSV KVGG+TEF +V L + GVQV+PHSPY Sbjct: 238 VAVAAGENWCTSFQFAQAIEAGAIDYAQPSVTKVGGVTEFRKVVALCEAAGVQVMPHSPY 297 Query: 335 FGPGFLATLHLM-AIRDAGLIEVFFMKRPACLWGDRIDVDANGHVAVPQGPGLGYEPDRN 393 FGPGFLATL L A+ + GL+E F++ A L+GD I+ NG VP GPGLG +PD + Sbjct: 298 FGPGFLATLQLASAMPNPGLVERFYVTPEASLYGDWIN-PVNGAFRVPNGPGLGLDPDPD 356 Query: 394 VMEQYRVA 401 V++QYRVA Sbjct: 357 VIKQYRVA 364 >ref|YP_001631910.1| putative racemase [Bordetella petrii DSM 12804] emb|CAP43642.1| putative racemase [Bordetella petrii] Length = 364 Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 167/369 (45%), Positives = 231/369 (62%), Gaps = 8/369 (2%) Query: 35 MKITDVRAHHIRIPF--DAGPASFRQGASAISALDMVLVEVSTDAGFTGWGDAFAYVCPK 92 MKIT + + IP+ D P F G + S L+ +LV+V TD G GWG+AF Y Sbjct: 1 MKITSIEPIVVSIPYGHDGPPTGF--GGTVWSKLNYLLVKVQTDDGLVGWGEAFGYNAIP 58 Query: 93 TSCTAVAEMIAPQARGLEVPDAASIPAAMEQIQRNLHLFGRYGITMFAISALDIALWDLA 152 + A+ +++ P A G E D + ME ++R LH+FGR G M+A+S LDIALWDLA Sbjct: 59 ATVAALEQIVGPLAIGREAGDIMQL---MEDLKRPLHIFGRNGPVMYALSGLDIALWDLA 115 Query: 153 GKVKGVPLHQLIGGAKRSTIPAYASLMRIGNPAHIAAECKKAIKLGYSAIKLHETTVPAV 212 GK G+P+ QL+G R ++ AY SLMR+ PA +A C++A++ G+ +KLHE TVPAV Sbjct: 116 GKRAGMPVCQLLGAGSRRSVTAYTSLMRLHEPATVATACERALERGFRRLKLHEITVPAV 175 Query: 213 AAAREAIGPGVPLMVDMNCPLDGPAAIQFARDCKQAAPLFLEEPVWPPEDFATLAEVRRE 272 AAAR+A+G V LM+D+NC A++ AR + +LEEPVWPPED A LA + RE Sbjct: 176 AAARQALGGDVDLMLDVNCAWPADEALRMARRLEPYQLKWLEEPVWPPEDVAGLARLHRE 235 Query: 273 GRLDIAAGENACTVHQFRQMMTAGAVSHAQPSVIKVGGITEFLRVAVLADEFGVQVIPHS 332 R+ +AAGEN F+ + +GA+ + QPS+ KVGGITEF VA LA G V PHS Sbjct: 236 ARVPLAAGENVGNAWAFQPLADSGALDYFQPSITKVGGITEFRAVAELARRHGRAVAPHS 295 Query: 333 PYFGPGFLATLHLMAIR-DAGLIEVFFMKRPACLWGDRIDVDANGHVAVPQGPGLGYEPD 391 PYFGPG LATL + + IE+F ++ + L+G +G +A+PQGPGLG +PD Sbjct: 296 PYFGPGLLATLQMAGVYAHIDGIEIFGVQLESGLFGAVGMPGPDGEIAIPQGPGLGCDPD 355 Query: 392 RNVMEQYRV 400 ++ +YR+ Sbjct: 356 PAIVARYRI 364 >ref|YP_726595.1| L-alanine-DL-glutamate epimerase [Ralstonia eutropha H16] emb|CAJ93227.1| L-Alanine-DL-glutamate epimerase [Ralstonia eutropha H16] Length = 367 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 157/371 (42%), Positives = 225/371 (60%), Gaps = 8/371 (2%) Query: 35 MKITDVRAHHIRIPFDAG--PASFRQGASAISALDMVLVEVSTDAGFTGWGDAFAYVCPK 92 MKI + A +RIPF G A+ G + + A D +L++V+TD G GWG+ F +V Sbjct: 1 MKIASIEAIVLRIPFTVGGVSAAGVWGGAGMQAADSLLLKVTTDDGLVGWGETFGFVGIP 60 Query: 93 TSCTAVAEMIAPQARGLEVPDAASIPAAMEQIQRNLHLFGRYGITMFAISALDIALWDLA 152 A+ +M+AP G DA I A +QR H+FGR G + +SALDIALWDL Sbjct: 61 AVKAAIEQMLAPACLGR---DATRIDAIGLDLQRRFHVFGRSGAIFYGLSALDIALWDLC 117 Query: 153 GKVKGVPLHQLIGGAKRSTIPAYASLMRIGNPAHIAAECKKAIKLGYSAIKLHETTVPAV 212 GK G+P+HQL+GGA+R +PAYASL+R +P +A +AI GY ++KLHE + + Sbjct: 118 GKAAGLPVHQLLGGARRDRLPAYASLIRYADPETMAVNVSRAIADGYRSLKLHEVDLAVI 177 Query: 213 AAAREAIGPGVPLMVDMNCPLDGPAAIQFARDCKQAAPLFLEEPVWPPEDFATLAEVRRE 272 AAR+A GP + + +D NCP AI AR + + +LEEP+WPPE++A LA +R++ Sbjct: 178 RAARKAAGPDIEITLDTNCPWPLHEAIDMARALEPLSLRWLEEPLWPPENYAGLAALRQQ 237 Query: 273 GRLDIAAGENACTVHQFRQMMTAGAVSHAQPSVIKVGGITEFLRVAVLADEFGVQVIPHS 332 + +AAGENA T+ +F+ +++ GAV QPS K+GGI+ V LA+ QV+ H+ Sbjct: 238 CAIPVAAGENATTLMEFQHLLSVGAVDVVQPSPAKMGGISALRNVFALAEAHNTQVMVHT 297 Query: 333 PYFGPGFLATLH--LMAIRDAGLIEVFFMKRPACLWGDRIDVDANGHVAVPQGPGLGYEP 390 Y GPG LA++H A +IE + A + GD + V +G +AVP GPGLG +P Sbjct: 298 FYDGPGLLASMHATAALGDAAAMIEWRYFDMEAQVLGDAV-VPRDGMIAVPAGPGLGIDP 356 Query: 391 DRNVMEQYRVA 401 D V+ +YRVA Sbjct: 357 DPEVIRRYRVA 367 >ref|XP_002537545.1| Galactonate dehydratase, putative [Ricinus communis] gb|EEF24838.1| Galactonate dehydratase, putative [Ricinus communis] Length = 368 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 151/370 (40%), Positives = 223/370 (60%), Gaps = 8/370 (2%) Query: 35 MKITDVRAHHIRIPFDAG--PASFRQGASAISALDMVLVEVSTDAGFTGWGDAFAYVCPK 92 MKI + +RIPF G A G + +D ++V+V+TD G GWG+ F + Sbjct: 1 MKIASIETLPLRIPFTTGGPSAGGVWGPKDLQVVDSLVVKVTTDDGTVGWGETFGFTAIP 60 Query: 93 TSCTAVAEMIAPQARGLEVPDAASIPAAMEQIQRNLHLFGRYGITMFAISALDIALWDLA 152 + M+AP+ G D A +M ++Q+ H+FGR G ++ +SA+DIALWD+A Sbjct: 61 AVKRVIDGMLAPELIGR---DVALREKSMVELQKKFHVFGRSGAFIYGLSAIDIALWDIA 117 Query: 153 GKVKGVPLHQLIGGAKRSTIPAYASLMRIGNPAHIAAECKKAIKLGYSAIKLHETTVPAV 212 GKV P+HQL+GGA+ +++ YASL+R +P +A ++A++ GY +KLHE TV V Sbjct: 118 GKVANQPVHQLLGGAEATSLACYASLIRYADPELVARNVRRAVESGYRHLKLHEVTVETV 177 Query: 213 AAAREAIGPGVPLMVDMNCPLDGPAAIQFARDCKQAAPLFLEEPVWPPEDFATLAEVRRE 272 AAREA GP + + +D+NCP A+ + ++EEPVWPPE++A +A VR+E Sbjct: 178 RAAREAAGPDIEITLDVNCPWTVREALDMTAQFRPFNLRWIEEPVWPPENYAGIATVRKE 237 Query: 273 GRLDIAAGENACTVHQFRQMMTAGAVSHAQPSVIKVGGITEFLRVAVLADEFGVQVIPHS 332 G + +AAGENA T+ F+ ++ AG+V QPS K+GGITE +V LA+ V V+ H+ Sbjct: 238 GGIPVAAGENASTLMDFQHLLEAGSVDFIQPSPAKMGGITELQKVFALANAHNVTVMVHT 297 Query: 333 PYFGPGFLATLHLMAIRDA--GLIEVFFMKRPACLWGDRIDVDANGHVAVPQGPGLGYEP 390 Y GPG LA++H A LIE + A L+GD + + NG + VPQGPGLG EP Sbjct: 298 FYDGPGLLASVHASAALGGPKSLIEWRYFDLEAQLYGDAV-IPRNGRIDVPQGPGLGIEP 356 Query: 391 DRNVMEQYRV 400 + +V+ YR+ Sbjct: 357 NPDVIRDYRI 366