BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0046.p (338 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766891.1| efflux protein [Bradyrhizobium japonicum USDA 1... 368 e-100 ref|YP_002944796.1| major facilitator superfamily protein [Vario... 317 2e-84 ref|YP_004155462.1| major facilitator superfamily protein [Vario... 316 4e-84 ref|YP_551040.1| major facilitator transporter [Polaromonas sp. ... 311 7e-83 ref|YP_364727.1| arabinose efflux porter AraJ [Xanthomonas campe... 290 2e-76 >ref|NP_766891.1| efflux protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45516.1| bll0251 [Bradyrhizobium japonicum USDA 110] Length = 412 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/218 (88%), Positives = 199/218 (91%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MP AVLALTAGAFGIGTTEF+IMGLLLQVAADM VSV AGLLISGYALGVFVGAP+LTL Sbjct: 20 MPPAVLALTAGAFGIGTTEFIIMGLLLQVAADMHVSVPIAGLLISGYALGVFVGAPVLTL 79 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 ATRRMPRK VLLALMAIFTLGNAACALAP+Y LLMAAR+LTSLAHGTFFGVGSVVAT LV Sbjct: 80 ATRRMPRKTVLLALMAIFTLGNAACALAPNYELLMAARVLTSLAHGTFFGVGSVVATGLV 139 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 EDKRASAIATMFIGLT+ATLLGVPFGAWFGLMLGWRAAFWAV IGVIAF V+A VPG Sbjct: 140 AEDKRASAIATMFIGLTVATLLGVPFGAWFGLMLGWRAAFWAVTVIGVIAFAVVAAFVPG 199 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 HVG DKP L EELAVLGRPQVLLGLAMTVFGF GLF Sbjct: 200 HVGNGDKPISLAEELAVLGRPQVLLGLAMTVFGFAGLF 237 >ref|YP_002944796.1| major facilitator superfamily protein [Variovorax paradoxus S110] gb|ACS19530.1| major facilitator superfamily MFS_1 [Variovorax paradoxus S110] Length = 397 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/218 (77%), Positives = 187/218 (85%), Gaps = 1/218 (0%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MP A+LALTAGAFGIGTTEF+IMGLL+QV+AD+ VS++AAGLLISGYALGV VGAPILT+ Sbjct: 1 MPIALLALTAGAFGIGTTEFVIMGLLMQVSADLHVSITAAGLLISGYALGVAVGAPILTI 60 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 ATR++PRK VLLALMAIFTLGN ACALAPSY LLMAAR++TSLAHGTFFGVGSVVAT LV Sbjct: 61 ATRKLPRKTVLLALMAIFTLGNLACALAPSYELLMAARVVTSLAHGTFFGVGSVVATGLV 120 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 ++RASAIA MF GLT ATLLGVP GAW GL GWRA FWAV IGV+AF VLAV VP Sbjct: 121 APERRASAIAIMFTGLTAATLLGVPAGAWLGLQYGWRATFWAVTLIGVLAFAVLAVFVP- 179 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 V K APLREELAVL RPQVLLGLAMTV G+ G+F Sbjct: 180 RVKGEAKTAPLREELAVLARPQVLLGLAMTVLGYAGVF 217 >ref|YP_004155462.1| major facilitator superfamily protein [Variovorax paradoxus EPS] gb|ADU37351.1| major facilitator superfamily MFS_1 [Variovorax paradoxus EPS] Length = 396 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 166/218 (76%), Positives = 186/218 (85%), Gaps = 1/218 (0%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 MP A+LALTAGAFGIGTTEF+IMGLL+QV+ D+ VS++ AGLLISGYALGV VGAP+LT+ Sbjct: 1 MPIALLALTAGAFGIGTTEFVIMGLLMQVSTDLHVSITMAGLLISGYALGVAVGAPVLTI 60 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 ATR++PRK VLLALMAIFTLGN ACALAP+Y +LM AR++TSLAHGTFFGVGSVVAT LV Sbjct: 61 ATRKLPRKTVLLALMAIFTLGNLACALAPNYEMLMTARVVTSLAHGTFFGVGSVVATGLV 120 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPG 180 ++RASAIA MF GLT ATLLGVP GAW GL GWR+AFWAV IGV+AF VLAV VP Sbjct: 121 APERRASAIAIMFTGLTAATLLGVPAGAWLGLQFGWRSAFWAVTLIGVLAFTVLAVFVP- 179 Query: 181 HVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 V KPAPLREELAVL RPQVLLGLAMTV GF G+F Sbjct: 180 RVKGEAKPAPLREELAVLARPQVLLGLAMTVLGFAGVF 217 >ref|YP_551040.1| major facilitator transporter [Polaromonas sp. JS666] gb|ABE46142.1| major facilitator superfamily MFS_1 [Polaromonas sp. JS666] Length = 405 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 167/219 (76%), Positives = 191/219 (87%), Gaps = 3/219 (1%) Query: 1 MPAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTL 60 +P A+LALTAGAFGIGTTEF+IMGLL+QV++D+ VS+++AGLLISGYALGV VGAP+LT+ Sbjct: 13 LPIALLALTAGAFGIGTTEFVIMGLLMQVSSDLGVSIASAGLLISGYALGVAVGAPLLTI 72 Query: 61 ATRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLV 120 ATRR+PRK VLLALMAIFTLGN ACALAP+Y +LMAAR++TSLAHGTFFGVGSVVAT LV Sbjct: 73 ATRRVPRKTVLLALMAIFTLGNLACALAPNYEMLMAARVVTSLAHGTFFGVGSVVATGLV 132 Query: 121 PEDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVP- 179 P ++RASAIA MF GLT+AT+LGVP GAW GL GWRAAFWAVA IGV+AF LAV VP Sbjct: 133 PPERRASAIAIMFTGLTVATMLGVPAGAWLGLHFGWRAAFWAVALIGVVAFAALAVFVPR 192 Query: 180 GHVGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 G A+ PAPLR+ELAVL RPQV LGLAMTV GF GLF Sbjct: 193 GQ--ADAHPAPLRDELAVLARPQVWLGLAMTVLGFAGLF 229 >ref|YP_364727.1| arabinose efflux porter AraJ [Xanthomonas campestris pv. vesicatoria str. 85-10] ref|ZP_08186978.1| arabinose efflux permease family protein [Xanthomonas perforans 91-118] emb|CAJ24693.1| arabinose efflux porter AraJ [Xanthomonas campestris pv. vesicatoria str. 85-10] gb|EGD15391.1| arabinose efflux permease family protein [Xanthomonas perforans 91-118] Length = 407 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 158/217 (72%), Positives = 180/217 (82%), Gaps = 1/217 (0%) Query: 2 PAAVLALTAGAFGIGTTEFLIMGLLLQVAADMQVSVSAAGLLISGYALGVFVGAPILTLA 61 P A+LALT GAFGIGTTEF+IMGLL QVAAD+ VS+SAAGLLISGYALGVFVGAP+LTLA Sbjct: 15 PPALLALTIGAFGIGTTEFVIMGLLQQVAADLGVSLSAAGLLISGYALGVFVGAPVLTLA 74 Query: 62 TRRMPRKAVLLALMAIFTLGNAACALAPSYGLLMAARILTSLAHGTFFGVGSVVATSLVP 121 + R+PRKAVL+ LM IFT+GN ACALAP Y LM AR+LTSLAHGTFFGVG+VVATSLVP Sbjct: 75 SARLPRKAVLIGLMLIFTVGNVACALAPDYTSLMLARVLTSLAHGTFFGVGAVVATSLVP 134 Query: 122 EDKRASAIATMFIGLTLATLLGVPFGAWFGLMLGWRAAFWAVAAIGVIAFIVLAVLVPGH 181 ++RASAI+ MF GLT+ATLLGVP GAW GL LGWRA FWAVAAIGV+A +AV VP Sbjct: 135 AERRASAISLMFAGLTVATLLGVPAGAWLGLQLGWRATFWAVAAIGVLATAAVAVWVPAT 194 Query: 182 VGANDKPAPLREELAVLGRPQVLLGLAMTVFGFGGLF 218 GA P R+E+AVL R QVLL LA+TV G+ G+F Sbjct: 195 AGA-ATPVSWRQEVAVLQRGQVLLALAITVVGYAGVF 230