BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0043.p (244 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769174.1| proteinase [Bradyrhizobium japonicum USDA 110] ... 408 e-112 ref|YP_001204121.1| putative serine protease SohB [Bradyrhizobiu... 398 e-109 ref|YP_001238430.1| putative serine protease SohB [Bradyrhizobiu... 393 e-107 ref|YP_534193.1| peptidase S49 [Rhodopseudomonas palustris BisB1... 385 e-105 ref|ZP_01045229.1| peptidase S49 [Nitrobacter sp. Nb-311A] >gi|8... 385 e-105 >ref|NP_769174.1| proteinase [Bradyrhizobium japonicum USDA 110] dbj|BAC47799.1| proteinase [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 200/244 (81%), Positives = 223/244 (91%), Gaps = 1/244 (0%) Query: 1 MSEQISDHAGRSGLLERVQAVLPARFRRGAAVVPVVRLAGVIGAVTPLRPGMTLSGVAKM 60 M+EQ++D SGL +++ LPARFR G AVVPVVRL+GVIGAVTPLRPGMTL+GVA++ Sbjct: 1 MAEQLNDRES-SGLADKLMQYLPARFRPGTAVVPVVRLSGVIGAVTPLRPGMTLAGVARV 59 Query: 61 LERAFGTRNAKAVALVINSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMI 120 LERAF RNAKAVALVINSPGGSPVQSRQIYLRI+QLAAEKKLPVLVFVEDVAASGGYMI Sbjct: 60 LERAFSMRNAKAVALVINSPGGSPVQSRQIYLRIKQLAAEKKLPVLVFVEDVAASGGYMI 119 Query: 121 ACAGDEIYCDPSSILGSIGVVGGSFGLEGLIKKIGVERRLYTAGNHKAMLDPFLPENPDD 180 ACAGDEI+CDPSSILGSIGVVGGSFG + IK++G+ERRLYTAG HKAMLDPFLPENPDD Sbjct: 120 ACAGDEIFCDPSSILGSIGVVGGSFGFQDAIKRLGIERRLYTAGAHKAMLDPFLPENPDD 179 Query: 181 VARLKAIQREIHAIFIALVKQSRGSRLKGADDVLFTGEYWAGDTSIGLGLADGIGDIRST 240 VA+LKA+QREIH IFIALV++SRG+RLKG DD LFTGEYWAG +SI LGLADGIGD+RST Sbjct: 180 VAKLKALQREIHQIFIALVRESRGARLKGEDDTLFTGEYWAGASSIALGLADGIGDLRST 239 Query: 241 LRAR 244 LRAR Sbjct: 240 LRAR 243 >ref|YP_001204121.1| putative serine protease SohB [Bradyrhizobium sp. ORS 278] emb|CAL75884.1| putative serine protease SohB [Bradyrhizobium sp. ORS 278] Length = 288 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 195/227 (85%), Positives = 215/227 (94%), Gaps = 1/227 (0%) Query: 18 VQAVLPARFRRGAAVVPVVRLAGVIGAVTPLRPGMTLSGVAKMLERAFGTRNAKAVALVI 77 ++A+LPAR R GA VVPVVRL+GVIGAVTPLRPG+TL+GVAKMLERAF RNAKAVALVI Sbjct: 1 MKALLPARLR-GAPVVPVVRLSGVIGAVTPLRPGLTLAGVAKMLERAFSMRNAKAVALVI 59 Query: 78 NSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIYCDPSSILGS 137 NSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEI+CDPSSI+GS Sbjct: 60 NSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIFCDPSSIVGS 119 Query: 138 IGVVGGSFGLEGLIKKIGVERRLYTAGNHKAMLDPFLPENPDDVARLKAIQREIHAIFIA 197 IGVVGGSFGL+ LIK+IG+ERRLYTAG HKAMLDPFLPENPDDVARLK IQREIHA+FI+ Sbjct: 120 IGVVGGSFGLQDLIKRIGIERRLYTAGEHKAMLDPFLPENPDDVARLKKIQREIHALFIS 179 Query: 198 LVKQSRGSRLKGADDVLFTGEYWAGDTSIGLGLADGIGDIRSTLRAR 244 LVK+SR +RLKGADD+LFTGEYWAGDT++ LGLAD IGD+R+ LRAR Sbjct: 180 LVKESRTNRLKGADDLLFTGEYWAGDTAVTLGLADAIGDLRAVLRAR 226 >ref|YP_001238430.1| putative serine protease SohB [Bradyrhizobium sp. BTAi1] gb|ABQ34524.1| putative serine protease SohB [Bradyrhizobium sp. BTAi1] Length = 283 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/227 (85%), Positives = 211/227 (92%), Gaps = 1/227 (0%) Query: 18 VQAVLPARFRRGAAVVPVVRLAGVIGAVTPLRPGMTLSGVAKMLERAFGTRNAKAVALVI 77 ++A+LPAR R GA VVPVVRL+GVIGAVTPLRPG+TL+GVAKMLERAF RNAKAVALVI Sbjct: 1 MKALLPARLR-GAPVVPVVRLSGVIGAVTPLRPGLTLAGVAKMLERAFAMRNAKAVALVI 59 Query: 78 NSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIYCDPSSILGS 137 NSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEI+CDPSSILGS Sbjct: 60 NSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIFCDPSSILGS 119 Query: 138 IGVVGGSFGLEGLIKKIGVERRLYTAGNHKAMLDPFLPENPDDVARLKAIQREIHAIFIA 197 IGVV GSFGL+ LI KIG+ERRLYTAG HKAMLDPFLPENPD VARLK IQREIHA+FI+ Sbjct: 120 IGVVSGSFGLQDLINKIGIERRLYTAGEHKAMLDPFLPENPDAVARLKKIQREIHALFIS 179 Query: 198 LVKQSRGSRLKGADDVLFTGEYWAGDTSIGLGLADGIGDIRSTLRAR 244 LVK+SR RLK ADDVLFTGEYWAGDT++ LGLADGIGD+R+ LRAR Sbjct: 180 LVKESRNGRLKSADDVLFTGEYWAGDTAVTLGLADGIGDLRAVLRAR 226 >ref|YP_534193.1| peptidase S49 [Rhodopseudomonas palustris BisB18] gb|ABD89874.1| peptidase S49 [Rhodopseudomonas palustris BisB18] Length = 302 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/244 (76%), Positives = 216/244 (88%) Query: 1 MSEQISDHAGRSGLLERVQAVLPARFRRGAAVVPVVRLAGVIGAVTPLRPGMTLSGVAKM 60 MSEQ ++H +G L+ + LP R+R G VVPVVRL+GVIGAVTPLRPG++L+G AKM Sbjct: 1 MSEQTAEHRASAGALQGLLGWLPERWRPGQVVVPVVRLSGVIGAVTPLRPGLSLAGTAKM 60 Query: 61 LERAFGTRNAKAVALVINSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMI 120 L+RAF TRNAKAVAL INSPGGSPVQSRQIYLRIRQLAAEKKLPV+ FVEDVAASGGYM+ Sbjct: 61 LDRAFATRNAKAVALAINSPGGSPVQSRQIYLRIRQLAAEKKLPVIAFVEDVAASGGYML 120 Query: 121 ACAGDEIYCDPSSILGSIGVVGGSFGLEGLIKKIGVERRLYTAGNHKAMLDPFLPENPDD 180 ACA DEIY DPSSI+GSIGVVGG+FG L+KKIGVERRLYTAG HKA LDPFLPE+P+D Sbjct: 121 ACAADEIYVDPSSIVGSIGVVGGTFGFPELLKKIGVERRLYTAGEHKAQLDPFLPEDPED 180 Query: 181 VARLKAIQREIHAIFIALVKQSRGSRLKGADDVLFTGEYWAGDTSIGLGLADGIGDIRST 240 VAR+KA+QREIHA+FI+LVK SRG++LKGA+D+LF+GEYWAG TS+ LGL+DGIGD+R T Sbjct: 181 VARVKALQREIHAMFISLVKDSRGAKLKGAEDLLFSGEYWAGGTSVTLGLSDGIGDLRGT 240 Query: 241 LRAR 244 LRAR Sbjct: 241 LRAR 244 >ref|ZP_01045229.1| peptidase S49 [Nitrobacter sp. Nb-311A] gb|EAQ36557.1| peptidase S49 [Nitrobacter sp. Nb-311A] Length = 306 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 189/232 (81%), Positives = 206/232 (88%), Gaps = 4/232 (1%) Query: 17 RVQAVL----PARFRRGAAVVPVVRLAGVIGAVTPLRPGMTLSGVAKMLERAFGTRNAKA 72 R++ VL P R+RRG AVVPVVRL+GVIGAVTPLRPGM L+GVAK LERAF NAKA Sbjct: 17 RIKTVLMKLVPKRWRRGTAVVPVVRLSGVIGAVTPLRPGMMLAGVAKTLERAFAVDNAKA 76 Query: 73 VALVINSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIYCDPS 132 VALV+NSPGGSPVQSRQIYLRIRQL+ EK++PVLVFVEDVAASGGYMIACAGDEI+CDPS Sbjct: 77 VALVVNSPGGSPVQSRQIYLRIRQLSREKEIPVLVFVEDVAASGGYMIACAGDEIFCDPS 136 Query: 133 SILGSIGVVGGSFGLEGLIKKIGVERRLYTAGNHKAMLDPFLPENPDDVARLKAIQREIH 192 SI+GSIGVVGGSFG L++KIGVERRLYTAG HKA LDPFLPENPDDVARLKAIQREIH Sbjct: 137 SIMGSIGVVGGSFGFTELMRKIGVERRLYTAGEHKATLDPFLPENPDDVARLKAIQREIH 196 Query: 193 AIFIALVKQSRGSRLKGADDVLFTGEYWAGDTSIGLGLADGIGDIRSTLRAR 244 A FI LVK SRG RLKG DD+LFTGEYWAG+ S+ LGLAD IGD+RSTLRAR Sbjct: 197 ATFIELVKASRGERLKGTDDLLFTGEYWAGERSVALGLADAIGDLRSTLRAR 248