BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0040.p         (76 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001238432.1| glycyl-tRNA synthetase subunit alpha [Bradyr...   137   7e-31
ref|YP_001204123.1| glycyl-tRNA synthetase subunit alpha [Bradyr...   135   1e-30
ref|NP_769175.1| glycyl-tRNA synthetase subunit alpha [Bradyrhiz...   132   1e-29
ref|YP_783315.1| glycyl-tRNA synthetase subunit alpha [Rhodopseu...   124   5e-27
ref|ZP_08628689.1| glycyl-tRNA synthetase alpha chain [Bradyrhiz...   124   7e-27

>ref|YP_001238432.1| glycyl-tRNA synthetase subunit alpha [Bradyrhizobium sp. BTAi1]
 gb|ABQ34526.1| glycyl-tRNA synthetase alpha chain [Bradyrhizobium sp. BTAi1]
          Length = 315

 Score =  137 bits (344), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 62/64 (96%), Positives = 63/64 (98%)

Query: 1  MDALPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN 60
          MD+LP HMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN
Sbjct: 1  MDSLPQHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN 60

Query: 61 AAYV 64
          AAYV
Sbjct: 61 AAYV 64


>ref|YP_001204123.1| glycyl-tRNA synthetase subunit alpha [Bradyrhizobium sp. ORS 278]
 emb|CAL75886.1| glycine tRNA synthetase, alpha subunit [Bradyrhizobium sp. ORS
          278]
          Length = 313

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/64 (96%), Positives = 63/64 (98%)

Query: 1  MDALPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN 60
          MD+LP HMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN
Sbjct: 4  MDSLPPHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN 63

Query: 61 AAYV 64
          AAYV
Sbjct: 64 AAYV 67


>ref|NP_769175.1| glycyl-tRNA synthetase subunit alpha [Bradyrhizobium japonicum
          USDA 110]
 sp|Q89S70.1|SYGA_BRAJA RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName:
          Full=Glycine--tRNA ligase alpha subunit; Short=GlyRS
 dbj|BAC47800.1| glycyl-tRNA synthetase, alpha subunit [Bradyrhizobium japonicum
          USDA 110]
          Length = 311

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/65 (96%), Positives = 63/65 (96%), Gaps = 1/65 (1%)

Query: 1  MDA-LPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPW 59
          MDA LP HMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPW
Sbjct: 1  MDASLPAHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPW 60

Query: 60 NAAYV 64
          NAAYV
Sbjct: 61 NAAYV 65


>ref|YP_783315.1| glycyl-tRNA synthetase subunit alpha [Rhodopseudomonas palustris
          BisA53]
 gb|ABJ08335.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisA53]
          Length = 320

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 55/64 (85%), Positives = 60/64 (93%)

Query: 1  MDALPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN 60
          MD++P HMRPERSFQG ILALQR+WA+ GCVILQPYDME+GAGTFHPATTLRALGPK WN
Sbjct: 1  MDSIPPHMRPERSFQGLILALQRYWADHGCVILQPYDMEVGAGTFHPATTLRALGPKHWN 60

Query: 61 AAYV 64
          AAYV
Sbjct: 61 AAYV 64


>ref|ZP_08628689.1| glycyl-tRNA synthetase alpha chain [Bradyrhizobiaceae bacterium
          SG-6C]
 gb|EGP08621.1| glycyl-tRNA synthetase alpha chain [Bradyrhizobiaceae bacterium
          SG-6C]
          Length = 310

 Score =  124 bits (310), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 59/64 (92%)

Query: 1  MDALPDHMRPERSFQGFILALQRFWAEQGCVILQPYDMEMGAGTFHPATTLRALGPKPWN 60
          MD+LP HMRPERSFQG IL LQRFWA+ GCVILQPYDME+GAGTFHPATTLRALGPK WN
Sbjct: 1  MDSLPPHMRPERSFQGLILTLQRFWADYGCVILQPYDMEVGAGTFHPATTLRALGPKRWN 60

Query: 61 AAYV 64
          AAYV
Sbjct: 61 AAYV 64