BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0039.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769175.1| glycyl-tRNA synthetase subunit alpha [Bradyrhiz... 408 e-112 ref|YP_001204123.1| glycyl-tRNA synthetase subunit alpha [Bradyr... 404 e-111 ref|YP_001238432.1| glycyl-tRNA synthetase subunit alpha [Bradyr... 402 e-110 ref|ZP_08628689.1| glycyl-tRNA synthetase alpha chain [Bradyrhiz... 397 e-109 ref|ZP_01045227.1| glycyl-tRNA synthetase alpha subunit [Nitroba... 395 e-108 >ref|NP_769175.1| glycyl-tRNA synthetase subunit alpha [Bradyrhizobium japonicum USDA 110] sp|Q89S70.1|SYGA_BRAJA RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Short=GlyRS dbj|BAC47800.1| glycyl-tRNA synthetase, alpha subunit [Bradyrhizobium japonicum USDA 110] Length = 311 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 199/221 (90%), Positives = 205/221 (92%), Gaps = 4/221 (1%) Query: 1 VIMKPSPANLQDLYLKSLAAIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 60 VIMKPSP NLQ+LYLKSLAAIGID+AVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ Sbjct: 91 VIMKPSPPNLQELYLKSLAAIGIDSAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 150 Query: 61 FTYFQQVAGVECAPVAGELTY---XLAMYVQGVDRVYDLNFNGRQGAEKVTYGDVFLQAE 117 FTYFQQVAG ECAPVAGELTY LAMYVQGVDRVYDLNFNGR G KVTYGDVFLQAE Sbjct: 151 FTYFQQVAGFECAPVAGELTYGLERLAMYVQGVDRVYDLNFNGRDGDAKVTYGDVFLQAE 210 Query: 118 QEYSRHNFEVADTAMLFEQFRMAEEACRKYLAAGWREGGNSKEHLMALPAYDQCIKASHV 177 +EYS+HNFEVADTAMLFEQF+MAE ACRKYL AGWRE GN KEHLMALPAYDQCIKASHV Sbjct: 211 REYSKHNFEVADTAMLFEQFKMAEAACRKYLDAGWRE-GNRKEHLMALPAYDQCIKASHV 269 Query: 178 FNLLDARGVISVTERQSYIARVRDLAKACGEAWIHTETGRA 218 FNLLDARGVISVTERQSYI RVR+LAKACGEAWIHTE G A Sbjct: 270 FNLLDARGVISVTERQSYILRVRELAKACGEAWIHTEAGGA 310 >ref|YP_001204123.1| glycyl-tRNA synthetase subunit alpha [Bradyrhizobium sp. ORS 278] emb|CAL75886.1| glycine tRNA synthetase, alpha subunit [Bradyrhizobium sp. ORS 278] Length = 313 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/221 (89%), Positives = 203/221 (91%), Gaps = 4/221 (1%) Query: 1 VIMKPSPANLQDLYLKSLAAIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 60 VIMKPSP NLQ+LYLKSL AIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ Sbjct: 93 VIMKPSPPNLQELYLKSLGAIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 152 Query: 61 FTYFQQVAGVECAPVAGELTY---XLAMYVQGVDRVYDLNFNGRQGAEKVTYGDVFLQAE 117 FTYFQQVAG ECAPVAGELTY LAMYVQGVDRVYDLNFNGR G KVTYGDVFLQAE Sbjct: 153 FTYFQQVAGFECAPVAGELTYGLERLAMYVQGVDRVYDLNFNGRDGDAKVTYGDVFLQAE 212 Query: 118 QEYSRHNFEVADTAMLFEQFRMAEEACRKYLAAGWREGGNSKEHLMALPAYDQCIKASHV 177 QEYSRHNFE ADTA+LFEQF+MAE ACRKYL AGWR+ GN KEHLMALPAYDQCIKASHV Sbjct: 213 QEYSRHNFEHADTAVLFEQFKMAESACRKYLDAGWRD-GNRKEHLMALPAYDQCIKASHV 271 Query: 178 FNLLDARGVISVTERQSYIARVRDLAKACGEAWIHTETGRA 218 FNLLDARGVISVTERQSYI RVR+LAKACGEAW+HTE G A Sbjct: 272 FNLLDARGVISVTERQSYILRVRELAKACGEAWLHTEAGGA 312 >ref|YP_001238432.1| glycyl-tRNA synthetase subunit alpha [Bradyrhizobium sp. BTAi1] gb|ABQ34526.1| glycyl-tRNA synthetase alpha chain [Bradyrhizobium sp. BTAi1] Length = 315 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/224 (87%), Positives = 203/224 (90%), Gaps = 6/224 (2%) Query: 1 VIMKPSPANLQDLYLKSLAAIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 60 VIMKPSP NLQ+LYLKSL AIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ Sbjct: 90 VIMKPSPPNLQELYLKSLGAIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 149 Query: 61 FTYFQQVAGVECAPVAGELTY---XLAMYVQGVDRVYDLNFNGRQGAEKVTYGDVFLQAE 117 FTYFQQVAG ECAPVAGELTY LAMYVQGVDRVYDLNFNGR G KVTYGDVFLQAE Sbjct: 150 FTYFQQVAGFECAPVAGELTYGLERLAMYVQGVDRVYDLNFNGRDGDAKVTYGDVFLQAE 209 Query: 118 QEYSRHNFEVADTAMLFEQFRMAEEACRKYLAAGWREG---GNSKEHLMALPAYDQCIKA 174 QEYSRHNFE ADT MLFEQF+MAE ACRKYLAAGW++ GN KEHLMALPAYDQCIKA Sbjct: 210 QEYSRHNFEHADTEMLFEQFKMAEGACRKYLAAGWQDNSKLGNRKEHLMALPAYDQCIKA 269 Query: 175 SHVFNLLDARGVISVTERQSYIARVRDLAKACGEAWIHTETGRA 218 SHVFNLLDARGVISVTERQSYI RVR+LAKACGEAW+HTE G A Sbjct: 270 SHVFNLLDARGVISVTERQSYILRVRELAKACGEAWLHTEAGGA 313 >ref|ZP_08628689.1| glycyl-tRNA synthetase alpha chain [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08621.1| glycyl-tRNA synthetase alpha chain [Bradyrhizobiaceae bacterium SG-6C] Length = 310 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/221 (85%), Positives = 205/221 (92%), Gaps = 4/221 (1%) Query: 1 VIMKPSPANLQDLYLKSLAAIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 60 VI+KPSP ++QDLYL+SL AIG+D+A+HDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ Sbjct: 90 VILKPSPPDIQDLYLQSLKAIGVDSALHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 149 Query: 61 FTYFQQVAGVECAPVAGELTY---XLAMYVQGVDRVYDLNFNGRQGAEKVTYGDVFLQAE 117 FTYFQQVAGVECAPVAGELTY LAMYVQGVDRVYDLNFNGR GA+KVTYGDVFLQAE Sbjct: 150 FTYFQQVAGVECAPVAGELTYGLERLAMYVQGVDRVYDLNFNGRDGADKVTYGDVFLQAE 209 Query: 118 QEYSRHNFEVADTAMLFEQFRMAEEACRKYLAAGWREGGNSKEHLMALPAYDQCIKASHV 177 QEYSRHNFE +DTAMLFEQF+MAE ACRKYL AGW++ G + HLMALPAYDQCIKASHV Sbjct: 210 QEYSRHNFEHSDTAMLFEQFKMAEGACRKYLDAGWKD-GKREAHLMALPAYDQCIKASHV 268 Query: 178 FNLLDARGVISVTERQSYIARVRDLAKACGEAWIHTETGRA 218 FNLLDARGVISVTERQSYI RVR+LAKACGEAW+HTE GRA Sbjct: 269 FNLLDARGVISVTERQSYILRVRELAKACGEAWVHTEAGRA 309 >ref|ZP_01045227.1| glycyl-tRNA synthetase alpha subunit [Nitrobacter sp. Nb-311A] gb|EAQ36555.1| glycyl-tRNA synthetase alpha subunit [Nitrobacter sp. Nb-311A] Length = 308 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/225 (84%), Positives = 205/225 (91%), Gaps = 7/225 (3%) Query: 1 VIMKPSPANLQDLYLKSLAAIGIDAAVHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 60 VI+KPSP+++QDLYLKSLAAIG+D+A+HDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ Sbjct: 83 VILKPSPSDIQDLYLKSLAAIGVDSALHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQ 142 Query: 61 FTYFQQVAGVECAPVAGELTY---XLAMYVQGVDRVYDLNFNGRQGAEKVTYGDVFLQAE 117 FTYFQQVAGVECAPVAGELTY LAMYVQGVDRVYDLNFNGR+GAEKVTYGDVFLQAE Sbjct: 143 FTYFQQVAGVECAPVAGELTYGLERLAMYVQGVDRVYDLNFNGREGAEKVTYGDVFLQAE 202 Query: 118 QEYSRHNFEVADTAMLFEQFRMAEEACRKYLAAGW----REGGNSKEHLMALPAYDQCIK 173 QEYSRHNFE +DTAMLFEQFRMAE AC+ YL AGW ++ G HLMALPAYDQCIK Sbjct: 203 QEYSRHNFEHSDTAMLFEQFRMAENACKTYLDAGWQDDPKQPGKHDAHLMALPAYDQCIK 262 Query: 174 ASHVFNLLDARGVISVTERQSYIARVRDLAKACGEAWIHTETGRA 218 ASHVFNLLDARGVISVTERQSYI RVR+LAKACGEAW+HT+ G A Sbjct: 263 ASHVFNLLDARGVISVTERQSYILRVRELAKACGEAWLHTDAGSA 307