BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0024.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_529941.1| hypothetical protein RPC_0043 [Rhodopseudomonas... 285 3e-75 ref|NP_945605.1| hypothetical protein RPA0252 [Rhodopseudomonas ... 280 2e-73 ref|YP_001989289.1| hypothetical protein Rpal_0253 [Rhodopseudom... 279 2e-73 ref|YP_004106756.1| hypothetical protein Rpdx1_0382 [Rhodopseudo... 275 5e-72 ref|YP_483940.1| hypothetical protein RPB_0318 [Rhodopseudomonas... 275 5e-72 >ref|YP_529941.1| hypothetical protein RPC_0043 [Rhodopseudomonas palustris BisB18] gb|ABD85622.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 232 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 142/229 (62%), Positives = 172/229 (75%) Query: 24 ISGPRQRRPALTATTIADPQSFIRANTRLRSVPLVPEIAVFLADESVPLWQKTENELNEA 83 I+ + PA++++ IADP +FI ANTRLR VPLVPE+ + +ADE++PLW +TE EL E Sbjct: 3 IAAGSAQDPAMSSSAIADPTAFIAANTRLRPVPLVPEVMLHVADEALPLWSRTEEELGEV 62 Query: 84 GLPPPFWAFAWAGGQALARYVLDHPDTVRDRRVLDIASGSGLVGIAAMKAGAVGVTVSDI 143 GLPPPFWAFAWAGGQALARY+LDHPD+V R V+D ASGSGLV IAAMKAGA VT DI Sbjct: 63 GLPPPFWAFAWAGGQALARYLLDHPDSVAGREVIDFASGSGLVAIAAMKAGAQSVTAFDI 122 Query: 144 DAFAIAAAELNAEVNQVHLTSCGEDVLDTQPSGRWQTILAGDIFYEQDTAARAFAFLADH 203 D FA A +NA N V + G+D+L QT+LAGDIFY++D AA AFAFL Sbjct: 123 DGFAREAIAINARANGVTIAISGDDLLAAPHVAPAQTVLAGDIFYQRDIAALAFAFLQRR 182 Query: 204 ARAGATILIGDPGRSFLPKTKLVRLADYRVPVTRDLEDAEIKHTAVWTI 252 A GAT+LIGDPGR++LPK +L +LA Y VPVTR+LEDAEIK T VWT+ Sbjct: 183 AAQGATVLIGDPGRTYLPKHQLTQLASYSVPVTRELEDAEIKATGVWTL 231 >ref|NP_945605.1| hypothetical protein RPA0252 [Rhodopseudomonas palustris CGA009] emb|CAE25696.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 220 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/220 (62%), Positives = 164/220 (74%) Query: 34 LTATTIADPQSFIRANTRLRSVPLVPEIAVFLADESVPLWQKTENELNEAGLPPPFWAFA 93 ++ +TI DP +FI ANTRLR VPLVPE+ + +ADE++PLW KTE EL EAGLPPPFWAFA Sbjct: 1 MSTSTITDPIAFIHANTRLREVPLVPEMMLHVADEALPLWSKTEEELGEAGLPPPFWAFA 60 Query: 94 WAGGQALARYVLDHPDTVRDRRVLDIASGSGLVGIAAMKAGAVGVTVSDIDAFAIAAAEL 153 WAGGQALARYVLDHP V + V+D+ASGSGLV IAAMKAGA VT DID FA A + Sbjct: 61 WAGGQALARYVLDHPQDVAGKEVIDLASGSGLVAIAAMKAGARSVTAFDIDGFAREAILV 120 Query: 154 NAEVNQVHLTSCGEDVLDTQPSGRWQTILAGDIFYEQDTAARAFAFLADHARAGATILIG 213 NA N V + CG+D+L Q +LAGDIFY+QD A AF FL + GA +LIG Sbjct: 121 NAAANGVAIEVCGDDLLAGPHPLPAQAVLAGDIFYQQDIAGLAFTFLQNRVAQGARVLIG 180 Query: 214 DPGRSFLPKTKLVRLADYRVPVTRDLEDAEIKHTAVWTIS 253 DPGR +LPK +LV+LA Y VPVTR+LED+EIKHT VWT+ Sbjct: 181 DPGRYYLPKDRLVQLASYGVPVTRELEDSEIKHTGVWTLK 220 >ref|YP_001989289.1| hypothetical protein Rpal_0253 [Rhodopseudomonas palustris TIE-1] gb|ACE98813.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 220 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/220 (62%), Positives = 164/220 (74%) Query: 34 LTATTIADPQSFIRANTRLRSVPLVPEIAVFLADESVPLWQKTENELNEAGLPPPFWAFA 93 ++ +TI DP +FI ANTRLR VPLVPE+ + +ADE++PLW KTE EL EAGLPPPFWAFA Sbjct: 1 MSTSTITDPIAFIHANTRLREVPLVPEVMLHVADEALPLWSKTEEELGEAGLPPPFWAFA 60 Query: 94 WAGGQALARYVLDHPDTVRDRRVLDIASGSGLVGIAAMKAGAVGVTVSDIDAFAIAAAEL 153 WAGGQALARYVLDHP V + V+D+ASGSGLV IAAMKAGA VT DID FA A + Sbjct: 61 WAGGQALARYVLDHPQDVAGKEVIDLASGSGLVAIAAMKAGARSVTAFDIDGFAREAILV 120 Query: 154 NAEVNQVHLTSCGEDVLDTQPSGRWQTILAGDIFYEQDTAARAFAFLADHARAGATILIG 213 NA N V + CG+D+L Q +LAGDIFY+QD A AFAFL + GA +LIG Sbjct: 121 NAAANGVAIDVCGDDLLAGPHPLPAQAVLAGDIFYQQDIAGLAFAFLQNRVAQGARVLIG 180 Query: 214 DPGRSFLPKTKLVRLADYRVPVTRDLEDAEIKHTAVWTIS 253 DPGR +LPK +LV+LA Y VPVTR+LED+EIKHT VW + Sbjct: 181 DPGRYYLPKDQLVQLASYGVPVTRELEDSEIKHTGVWMLK 220 >ref|YP_004106756.1| hypothetical protein Rpdx1_0382 [Rhodopseudomonas palustris DX-1] gb|ADU42023.1| hypothetical protein Rpdx1_0382 [Rhodopseudomonas palustris DX-1] Length = 220 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 137/220 (62%), Positives = 163/220 (74%) Query: 34 LTATTIADPQSFIRANTRLRSVPLVPEIAVFLADESVPLWQKTENELNEAGLPPPFWAFA 93 ++++ +ADP +FI ANTRLR VPLVPE+ + +ADE++PLW KTE EL EAGLPPPFWAFA Sbjct: 1 MSSSAVADPIAFIHANTRLREVPLVPEVMLHVADEALPLWSKTEEELGEAGLPPPFWAFA 60 Query: 94 WAGGQALARYVLDHPDTVRDRRVLDIASGSGLVGIAAMKAGAVGVTVSDIDAFAIAAAEL 153 WAGGQALARYVLDHP V + V+D+ASGSGLV IAAMKAGA VT DID FA A + Sbjct: 61 WAGGQALARYVLDHPQDVAGKDVIDLASGSGLVAIAAMKAGARKVTAFDIDGFAREAILV 120 Query: 154 NAEVNQVHLTSCGEDVLDTQPSGRWQTILAGDIFYEQDTAARAFAFLADHARAGATILIG 213 NA N V + C D+L Q +LAGDIFY+QD A AFAFL GA +LIG Sbjct: 121 NAAANGVAIEVCDHDLLAGPHPLPAQAVLAGDIFYQQDIAGLAFAFLKSRVALGARVLIG 180 Query: 214 DPGRSFLPKTKLVRLADYRVPVTRDLEDAEIKHTAVWTIS 253 DPGR +LPK +LV+LA Y VPVTR+LED+EIKHT VWT+ Sbjct: 181 DPGRYYLPKDQLVQLATYGVPVTRELEDSEIKHTGVWTLK 220 >ref|YP_483940.1| hypothetical protein RPB_0318 [Rhodopseudomonas palustris HaA2] gb|ABD05029.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 231 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 146/230 (63%), Positives = 172/230 (74%), Gaps = 1/230 (0%) Query: 24 ISGPRQRRPALTATTIADPQSFIRANTRLRSVPLVPEIAVFLADESVPLWQKTENELNEA 83 IS P+++ T IADP +FIR NTRLR VPLVPEI++ +ADE++PLW KTE EL EA Sbjct: 3 ISSAPLHHPSMS-TAIADPLAFIRDNTRLRPVPLVPEISLHVADEALPLWSKTEEELGEA 61 Query: 84 GLPPPFWAFAWAGGQALARYVLDHPDTVRDRRVLDIASGSGLVGIAAMKAGAVGVTVSDI 143 GLPPPFWAFAWAGGQALARYVLDHPD V R V+D ASGSGLV IAAMKAGA VT DI Sbjct: 62 GLPPPFWAFAWAGGQALARYVLDHPDCVAGRDVIDFASGSGLVAIAAMKAGARRVTAFDI 121 Query: 144 DAFAIAAAELNAEVNQVHLTSCGEDVLDTQPSGRWQTILAGDIFYEQDTAARAFAFLADH 203 D FA A +NA N V L CG+D+L + + QT+LAGDIFY+QD A AFA L Sbjct: 122 DGFAREAIAVNAAANGVALAICGDDLLAAEHAAPAQTVLAGDIFYQQDIAELAFAMLQRR 181 Query: 204 ARAGATILIGDPGRSFLPKTKLVRLADYRVPVTRDLEDAEIKHTAVWTIS 253 + GA +LIGDPGR++LPK +L +LA Y VPVTR+LEDAEIK T VWT++ Sbjct: 182 SAGGAQVLIGDPGRTYLPKDRLSQLASYGVPVTRELEDAEIKATGVWTLT 231