BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0023.p (338 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001831471.1| transposase IS4 family protein [Beijerinckia... 475 e-132 ref|YP_001415470.1| transposase IS4 family protein [Xanthobacter... 469 e-130 emb|CAM76871.1| transposase and inactivated derivatives [Magneto... 426 e-117 ref|YP_002274905.1| transposase IS1182 family protein [Gluconace... 394 e-107 ref|YP_002490229.1| transposase IS4 family protein [Methylobacte... 393 e-107 >ref|YP_001831471.1| transposase IS4 family protein [Beijerinckia indica subsp. indica ATCC 9039] ref|YP_001833373.1| transposase IS4 family protein [Beijerinckia indica subsp. indica ATCC 9039] ref|YP_001833381.1| transposase IS4 family protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB93982.1| transposase IS4 family protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB95884.1| transposase IS4 family protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB95892.1| transposase IS4 family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 450 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 224/304 (73%), Positives = 255/304 (83%) Query: 35 ASLIKADANRQKGIEGDKGLPPEAASRAINEYLAVLDDAAFGAATEVTPKFVSPADPAAR 94 SLIKADA+RQ + G +GLP + SRA+ EYL VLDDAAFGAAT V PKF+SPADPAAR Sbjct: 147 GSLIKADASRQTCVPGAEGLPADTMSRAVEEYLTVLDDAAFGAATSVKPKFISPADPAAR 206 Query: 95 WTGAHGGQAFFAYSTNYLVDVENAVIVDVEATTAIRQAEVLAAKRMIERSLEQFDLYPAR 154 WTGA GG A+FAY+ NYL+D ++A+IVDVE TTAIRQAEV AAKRMIER++ +F+LYP Sbjct: 207 WTGAQGGPAYFAYTVNYLIDTDHAIIVDVEPTTAIRQAEVTAAKRMIERTMARFELYPES 266 Query: 155 LLGDSGYGSAEMLGWLVYERGIEPHVTVFDKSARADGTFSREDFTYDQTSDVYTCPGGKM 214 L GD+GYGS EMLGWLVYE+GIEPH+ VFDKS R DGTFSR DF YD DVY CP GKM Sbjct: 267 LAGDTGYGSGEMLGWLVYEQGIEPHIPVFDKSTRTDGTFSRGDFVYDHEGDVYFCPAGKM 326 Query: 215 LTTTGTLVNDGATMLYRASKHDCTDCGLKARCCPKDSVRKVSRSIYEGARDMAREIARSS 274 LT+ GTLVNDGAT+LY ASK+DC +C LK+RCCP RKV RSIYEGARDMAR+I +S Sbjct: 327 LTSKGTLVNDGATLLYLASKYDCDECALKSRCCPNTPARKVPRSIYEGARDMARDILQSK 386 Query: 275 EGRTSRRLRKKIEMLFAHLKRILKLDRLRLRGPNGARDEFTLAATAQNLRKMAKLIPMPI 334 EGRTS+RLRKK+EMLFAHLKRIL LDRLRLRGPNGARDEF LAATAQNLRK+AKLIP+P Sbjct: 387 EGRTSQRLRKKVEMLFAHLKRILHLDRLRLRGPNGARDEFHLAATAQNLRKLAKLIPIPQ 446 Query: 335 ARPA 338 +P Sbjct: 447 PKPV 450 >ref|YP_001415470.1| transposase IS4 family protein [Xanthobacter autotrophicus Py2] gb|ABS65813.1| transposase IS4 family protein [Xanthobacter autotrophicus Py2] Length = 458 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 231/304 (75%), Positives = 257/304 (84%), Gaps = 7/304 (2%) Query: 35 ASLIKADANRQKGIEGDKGLPPEAASRAINEYLAVLDDAAFGAATEVTPKFVSPADPAAR 94 ASLIKA+A+RQKG++G GL PEAA RA+ EYLAVLDDAAFGAATEVTPKF+SPADPAAR Sbjct: 147 ASLIKAEASRQKGVDGKAGLSPEAAGRAVEEYLAVLDDAAFGAATEVTPKFLSPADPAAR 206 Query: 95 WTGAHGGQAFFAYSTNYLVDVENAVIVDVEATTAIRQAEVLAAKRMIERSLEQFDLYPAR 154 WTGAHGGQAFFAYSTNYL+DV+NA+IVDVEATTAIRQAEVLAAKRMIERS+E+FDLYPAR Sbjct: 207 WTGAHGGQAFFAYSTNYLIDVDNAIIVDVEATTAIRQAEVLAAKRMIERSMERFDLYPAR 266 Query: 155 LLGDSGYGSAEMLGWLVYERGIEPHVTVFDKSARADGTFSREDFTYDQTSDVYTCPGGKM 214 L+GDS YGSAEML WLV+E GIEPHV VFDKSAR DGTFSR DF YD D+YTCPGGK Sbjct: 267 LMGDSAYGSAEMLAWLVHEHGIEPHVPVFDKSARRDGTFSRTDFAYDHVRDLYTCPGGKE 326 Query: 215 L-------TTTGTLVNDGATMLYRASKHDCTDCGLKARCCPKDSVRKVSRSIYEGARDMA 267 L + T V+ M YRA+K DC C LK++CCP + RKV RSI+EGARDMA Sbjct: 327 LRRYRRHFSVTRDSVDPHGFMRYRAAKSDCGACALKSQCCPAEPPRKVLRSIHEGARDMA 386 Query: 268 REIARSSEGRTSRRLRKKIEMLFAHLKRILKLDRLRLRGPNGARDEFTLAATAQNLRKMA 327 R+IA + TSRR RKK+EMLFAHLKRILKLDRLRLRGPNGARDEF LAATAQNLRK+A Sbjct: 387 RDIAATEAYVTSRRQRKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAATAQNLRKLA 446 Query: 328 KLIP 331 KL+P Sbjct: 447 KLMP 450 >emb|CAM76871.1| transposase and inactivated derivatives [Magnetospirillum gryphiswaldense MSR-1] emb|CAM76874.1| transposase and inactivated derivatives [Magnetospirillum gryphiswaldense MSR-1] emb|CAM77085.1| transposase and inactivated derivatives [Magnetospirillum gryphiswaldense MSR-1] emb|CAM78113.1| IS4 family Transposase [Magnetospirillum gryphiswaldense MSR-1] Length = 458 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 226/310 (72%), Positives = 251/310 (80%), Gaps = 7/310 (2%) Query: 35 ASLIKADANRQKGIEGDKGLPPEAASRAINEYLAVLDDAAFGAATEVTPKFVSPADPAAR 94 ASLIKADANRQK IEG KGLPPEA SRAI+EYLAVLDDAAFGAATEVTPKF+SPADPAAR Sbjct: 147 ASLIKADANRQKSIEGSKGLPPEATSRAIDEYLAVLDDAAFGAATEVTPKFISPADPAAR 206 Query: 95 WTGAHGGQAFFAYSTNYLVDVENAVIVDVEATTAIRQAEVLAAKRMIERSLEQFDLYPAR 154 WT AHGG AFFAY+TNYL+D+E+AVIVDVEA+TA+RQAEV AAK MIER+ E+FDLYP R Sbjct: 207 WTAAHGGLAFFAYATNYLIDLEHAVIVDVEASTAVRQAEVTAAKTMIERADERFDLYPER 266 Query: 155 LLGDSGYGSAEMLGWLVYERGIEPHVTVFDKSARADGTFSREDFTYDQTSDVYTCPGGKM 214 L D+ YG+AEML WLV++RGIEPH+ VFDKSAR DGTFSR DF YD D Y CP GK Sbjct: 267 LAADTAYGAAEMLEWLVHDRGIEPHIPVFDKSARKDGTFSRADFVYDHEKDTYACPAGKE 326 Query: 215 L-------TTTGTLVNDGATMLYRASKHDCTDCGLKARCCPKDSVRKVSRSIYEGARDMA 267 L TT T V TM YRASK DC C +K RCCP RKV RSI+EGARD+A Sbjct: 327 LRKSHRPFTTPRTGVAKDNTMRYRASKSDCDICPMKLRCCPNAPARKVPRSIHEGARDLA 386 Query: 268 REIARSSEGRTSRRLRKKIEMLFAHLKRILKLDRLRLRGPNGARDEFTLAATAQNLRKMA 327 R+IA++ TSRR RKK+EMLFAHLKRIL+LDRLRLRGP GA+DEF LAATAQNLRK+A Sbjct: 387 RDIAKTDAYVTSRRQRKKVEMLFAHLKRILRLDRLRLRGPCGAKDEFLLAATAQNLRKLA 446 Query: 328 KLIPMPIARP 337 KLIPMP P Sbjct: 447 KLIPMPQPVP 456 >ref|YP_002274905.1| transposase IS1182 family protein [Gluconacetobacter diazotrophicus PAl 5] ref|YP_002275452.1| transposase IS1182 family protein [Gluconacetobacter diazotrophicus PAl 5] gb|ACI50290.1| transposase IS1182 family protein [Gluconacetobacter diazotrophicus PAl 5] gb|ACI50837.1| transposase IS1182 family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 458 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 193/304 (63%), Positives = 225/304 (74%), Gaps = 7/304 (2%) Query: 35 ASLIKADANRQKGIEGDKGLPPEAASRAINEYLAVLDDAAFGAATEVTPKFVSPADPAAR 94 AS IKADANRQ+ + LP E A RA+ EY +VLDDAAFG+AT V PK++SP DPAAR Sbjct: 147 ASTIKADANRQRSVPSPDKLPIEVAQRAVREYFSVLDDAAFGSATPVQPKYISPVDPAAR 206 Query: 95 WTGAHGGQAFFAYSTNYLVDVENAVIVDVEATTAIRQAEVLAAKRMIERSLEQFDLYPAR 154 W A GG A++AY TNYL+D+++AVI+DVE TTAIRQAEV A +RMIER+ E F ++P R Sbjct: 207 WNAASGGLAYYAYCTNYLIDLKSAVIMDVETTTAIRQAEVTAQRRMIERTQETFGIWPER 266 Query: 155 LLGDSGYGSAEMLGWLVYERGIEPHVTVFDKSARADGTFSREDFTYDQTSDVYTCPGGKM 214 L D+ YGSAE L WLV+ERGIEPH+ VFDKSAR DGTF R DFTYD D+Y CPGG+ Sbjct: 267 LAADTAYGSAENLAWLVHERGIEPHIPVFDKSARQDGTFERRDFTYDHVHDLYICPGGQQ 326 Query: 215 LTTTGTLVNDGA-------TMLYRASKHDCTDCGLKARCCPKDSVRKVSRSIYEGARDMA 267 L +N + YR+SK C C LK +CCP RKV RSI+EGARDMA Sbjct: 327 LKQQWRKINSDQPNAPPDNLLRYRSSKLACDVCTLKPKCCPNQPNRKVLRSIHEGARDMA 386 Query: 268 REIARSSEGRTSRRLRKKIEMLFAHLKRILKLDRLRLRGPNGARDEFTLAATAQNLRKMA 327 R+IA + SRR RKK+EMLFAHLKRILK+DRLRLRGPNGARDEF LAA AQNLRKMA Sbjct: 387 RDIALTDAYIISRRERKKVEMLFAHLKRILKIDRLRLRGPNGARDEFHLAAAAQNLRKMA 446 Query: 328 KLIP 331 KLIP Sbjct: 447 KLIP 450 >ref|YP_002490229.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] ref|YP_002496249.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] ref|YP_002498301.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] ref|YP_002498572.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] ref|YP_002499781.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] ref|YP_002499809.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] ref|YP_002501709.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] gb|ACL55946.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] gb|ACL57998.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] gb|ACL58269.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] gb|ACL59478.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] gb|ACL59506.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] gb|ACL61406.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] gb|ACL63062.1| transposase IS4 family protein [Methylobacterium nodulans ORS 2060] Length = 460 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 199/314 (63%), Positives = 236/314 (75%), Gaps = 10/314 (3%) Query: 35 ASLIKADANRQKGIEGDKGLPPEAASR---AINEYLAVLDDAAFGAATEVTPKFVSPADP 91 ASLI+ADAN+Q+ + + + +R ++ EYL LD+AA+GAA+EV PKFVS +DP Sbjct: 147 ASLIRADANKQRSADASEAVDWNDLARIRRSVREYLDTLDEAAWGAASEVQPKFVSRSDP 206 Query: 92 AARWTGAHGGQAFFAYSTNYLVDVENAVIVDVEATTAIRQAEVLAAKRMIERSLEQFDLY 151 AA+WTGA G AFFAY+TNYL+D+++AVIVDVEA+ AIRQAEV AA+ MI R+ ++F L+ Sbjct: 207 AAQWTGALKGHAFFAYATNYLIDLDHAVIVDVEASRAIRQAEVGAARTMIARAQDRFGLW 266 Query: 152 PARLLGDSGYGSAEMLGWLVYERGIEPHVTVFDKSARADGTFSREDFTYDQTSDVYTCPG 211 PARL DS YGSAE L WLV+ERGIEPH+ VFDKS R DGTFSR FTYD +D YTCP Sbjct: 267 PARLAADSAYGSAEQLAWLVHERGIEPHIPVFDKSERRDGTFSRSAFTYDPAADAYTCPA 326 Query: 212 G-------KMLTTTGTLVNDGATMLYRASKHDCTDCGLKARCCPKDSVRKVSRSIYEGAR 264 G K+ T LV+D M YRASK DC C LK RCCP RK+ RSI+EGAR Sbjct: 327 GHPLRPRQKVYRTPFPLVDDDGMMRYRASKRDCDACALKPRCCPTTPARKIPRSIHEGAR 386 Query: 265 DMAREIARSSEGRTSRRLRKKIEMLFAHLKRILKLDRLRLRGPNGARDEFTLAATAQNLR 324 MAR+I S EGRTSRR RKK+EMLFAHLKRILKLDRLRLRGPNGARDEF LAA AQNLR Sbjct: 387 QMARDICASEEGRTSRRERKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAAAAQNLR 446 Query: 325 KMAKLIPMPIARPA 338 K+A+LIP+ PA Sbjct: 447 KLAQLIPLQQLSPA 460