BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0015.p (272 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001761580.1| type 11 methyltransferase [Shewanella woodyi... 259 3e-67 ref|YP_167471.1| hypothetical protein SPO2245 [Ruegeria pomeroyi... 254 1e-65 ref|ZP_08859918.1| hypothetical protein RTW15_03021 [Ruegeria sp... 238 1e-60 ref|YP_002545296.1| ubiquinone/menaquinone biosynthesis methyltr... 232 5e-59 ref|YP_004612010.1| type 11 methyltransferase [Mesorhizobium opp... 227 1e-57 >ref|YP_001761580.1| type 11 methyltransferase [Shewanella woodyi ATCC 51908] gb|ACA87485.1| Methyltransferase type 11 [Shewanella woodyi ATCC 51908] Length = 278 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 130/269 (48%), Positives = 171/269 (63%), Gaps = 2/269 (0%) Query: 5 VADHYARGDLIAAIREGLARIGKTEATVTAEDLAPVDEFHIGGSAATADLAQQLGLSPND 64 V+ HY G+L++AI+ L++ G + +T D+APVDEFHIGG AT L Q+ S Sbjct: 7 VSQHYTHGELLSAIQAALSKQGNSIDKLTLADIAPVDEFHIGGRLATEHLLSQVNFSAEQ 66 Query: 65 RVLDIGCGLGGPARHIAARHGCLVTGIDLTRDYIAAGNELSEWLQLRDRVSLQHGNALSL 124 +LD+GCGLGG AR IA VTGIDLT +YI GN LS+W+ L +RVSL HG+ALS+ Sbjct: 67 DILDVGCGLGGAARFIANHFNNQVTGIDLTAEYIETGNVLSQWVGLDERVSLYHGSALSM 126 Query: 125 PFASGSFSAAYMLHVGMNIADKSALFAEVGRVLRAQARFAIYDVMRTRHGALSYPLPWAR 184 PF F A HVGMNI DK LF E+ RVL+ + FA+YD+MR GAL+YP+PWA Sbjct: 127 PFEDSQFHGATQFHVGMNIKDKQTLFREIYRVLKPGSTFALYDIMRMESGALAYPVPWAT 186 Query: 185 TPDANAVTSPGHYRDALSTAGFEVLSDRQRLDVALEYFA--RQRAQVAAGPAPLGVHTLM 242 + +++ Y+ AL AGF V +R + LE+F+ ++R Q GP PLG+HTLM Sbjct: 187 EASYSHLSTVDEYQAALIQAGFIVGDINERREFGLEFFSKMKERNQAQGGPPPLGLHTLM 246 Query: 243 GARRPEMVRNMSEAISDGRIAPIEIIARK 271 GA V NM + I G IAP+E+IA K Sbjct: 247 GAHTAVKVDNMLKNIRGGYIAPVELIAYK 275 >ref|YP_167471.1| hypothetical protein SPO2245 [Ruegeria pomeroyi DSS-3] gb|AAV95511.1| conserved domain protein [Ruegeria pomeroyi DSS-3] Length = 407 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/269 (47%), Positives = 161/269 (59%), Gaps = 2/269 (0%) Query: 5 VADHYARGDLIAAIREGLARIGKTEATVTAEDLAPVDEFHIGGSAATADLAQQLGLSPND 64 +A HY G+L AAIR GL G T + EDL PVDEFHIGG AAT Q+ LS Sbjct: 138 IATHYGHGNLTAAIRSGLQAQGITPEQASVEDLGPVDEFHIGGRAATVHFFDQIDLSETS 197 Query: 65 RVLDIGCGLGGPARHIAARHGCLVTGIDLTRDYIAAGNELSEWLQLRDRVSLQHGNALSL 124 + LDIGCGLGG AR+ A G + GIDLT +Y+ G L +W+ L D+V+L +ALS+ Sbjct: 198 KALDIGCGLGGAARYAAHSFGSQIEGIDLTPEYVETGGALCQWVGLSDKVNLSVASALSM 257 Query: 125 PFASGSFSAAYMLHVGMNIADKSALFAEVGRVLRAQARFAIYDVMRTRHGALSYPLPWAR 184 PF SG F AYM+HVGMNI DK ALF EV RVL+ FAIYD+MR+ L YP+PWA Sbjct: 258 PFESGDFDIAYMMHVGMNIEDKRALFKEVARVLKPGGTFAIYDIMRSNDEDLVYPVPWAS 317 Query: 185 TPDANAVTSPGHYRDALSTAGFEVLSDRQRLDVALEYFARQRAQVAA--GPAPLGVHTLM 242 + + + P YR AL GF V + R D A+++F + + A P PLG+H LM Sbjct: 318 SAETCCLAGPATYRAALEEGGFVVRQENDRRDFAIDFFEKMKKANAGQKSPPPLGLHVLM 377 Query: 243 GARRPEMVRNMSEAISDGRIAPIEIIARK 271 E + NM + GRI P+EI A K Sbjct: 378 QQTTAEKIPNMIANLQAGRIKPVEIYAVK 406 >ref|ZP_08859918.1| hypothetical protein RTW15_03021 [Ruegeria sp. TW15] Length = 276 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 134/274 (48%), Positives = 167/274 (60%), Gaps = 5/274 (1%) Query: 1 MRSP--VADHYARGDLIAAIREGLARIGKTEATVTAEDLAPVDEFHIGGSAATADLAQQL 58 M +P VA HY G L+ I +G A +G T ++ + LAPVDEFHIGG AT + L Sbjct: 1 MTNPNEVAHHYHSGHLLKRISDGCAALGLT-PPISHDALAPVDEFHIGGRLATEPFVKAL 59 Query: 59 GLSPNDRVLDIGCGLGGPARHIAARHGCLVTGIDLTRDYIAAGNELSEWLQLRDRVSLQH 118 GLSP RV+D GCGLGGPAR++AA G VTG+DLT +++ G L+EW L RV L Sbjct: 60 GLSPESRVVDFGCGLGGPARYVAAATGAYVTGVDLTAEFVETGRALTEWTGLLHRVQLIE 119 Query: 119 GNALSLPFASGSFSAAYMLHVGMNIADKSALFAEVGRVLRAQARFAIYDVMRTRHGALSY 178 G+ L LP + S AAYM+HVGMNIADK + E RVLR FAIYDVM+ G + Y Sbjct: 120 GSVLELPLDTDSMDAAYMIHVGMNIADKVGIAREAKRVLRPGGIFAIYDVMQVGEGQMDY 179 Query: 179 PLPWARTPDANAVTSPGHYRDALSTAGFEVLSDRQRLDVALEYFAR-QRAQV-AAGPAPL 236 P PWA + D +A+TSP Y AL + GFEV R A ++FA AQ + GP PL Sbjct: 180 PAPWASSADQSALTSPETYEAALKSVGFEVSERIDRTAFAKQFFADLATAQSRSDGPPPL 239 Query: 237 GVHTLMGARRPEMVRNMSEAISDGRIAPIEIIAR 270 G+H +MG V++M I G IAPIEI AR Sbjct: 240 GLHLIMGDDTALKVQHMVRNIERGLIAPIEIHAR 273 >ref|YP_002545296.1| ubiquinone/menaquinone biosynthesis methyltransferase protein [Agrobacterium radiobacter K84] gb|ACM27366.1| ubiquinone/menaquinone biosynthesis methyltransferase protein [Agrobacterium radiobacter K84] Length = 274 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 122/266 (45%), Positives = 167/266 (62%) Query: 5 VADHYARGDLIAAIREGLARIGKTEATVTAEDLAPVDEFHIGGSAATADLAQQLGLSPND 64 VA HY G L I GL GK ++ +DLA +DEFH+G AT + A+ L L Sbjct: 7 VASHYTHGSLEETILAGLTAGGKDIDHLSIDDLAGIDEFHLGRREATREFARDLDLIDGM 66 Query: 65 RVLDIGCGLGGPARHIAARHGCLVTGIDLTRDYIAAGNELSEWLQLRDRVSLQHGNALSL 124 R++DIG GLGGPAR++A+ +G +VTG+DLT +++ N L+E + +VS + +ALSL Sbjct: 67 RLIDIGSGLGGPARYMASTYGSIVTGVDLTDEFVKVANVLTERCGMAAQVSFRQASALSL 126 Query: 125 PFASGSFSAAYMLHVGMNIADKSALFAEVGRVLRAQARFAIYDVMRTRHGALSYPLPWAR 184 PFA SF A ++HVGMNI DK+ LFAEV RVL+ RF +Y+VM+ R GAL YP+PWA Sbjct: 127 PFADQSFERATLIHVGMNIEDKARLFAEVRRVLKPGGRFGLYEVMQMRDGALPYPMPWAM 186 Query: 185 TPDANAVTSPGHYRDALSTAGFEVLSDRQRLDVALEYFARQRAQVAAGPAPLGVHTLMGA 244 TP+ + V +P YR LS AGF V S++ R +A+ RA A G L + LMG Sbjct: 187 TPETSFVCTPETYRQLLSEAGFTVESEQDRSALAIRLAQEMRASAAGGGQSLSLGALMGP 246 Query: 245 RRPEMVRNMSEAISDGRIAPIEIIAR 270 + E V N+ ++ G IAPIE+IA+ Sbjct: 247 KAAERVGNVGTSVGSGLIAPIEMIAK 272 >ref|YP_004612010.1| type 11 methyltransferase [Mesorhizobium opportunistum WSM2075] gb|AEH87916.1| Methyltransferase type 11 [Mesorhizobium opportunistum WSM2075] Length = 280 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 124/271 (45%), Positives = 163/271 (60%), Gaps = 5/271 (1%) Query: 5 VADHYARGDLIAAIREGLARIGKTEATVTAEDLAPVDEFHIGGSAATADLAQQLGLSPND 64 +A HY L I GLA IG A + DL VDEFHIGG AAT +L Q+GL P Sbjct: 8 IARHYEISGLEQRILAGLADIGVDVAHLRVSDLEAVDEFHIGGVAATRELVDQMGLKPAG 67 Query: 65 RVLDIGCGLGGPARHIAARHGCLVTGIDLTRDYIAAGNELSEWLQLRDRVSLQHGNALSL 124 R+LDIG G+GGPAR +A VTGIDLT+ Y+ LS+ + DR G+AL + Sbjct: 68 RLLDIGSGIGGPARFVANSADADVTGIDLTQSYVDVATSLSKRTGMADRTHFVQGSALDM 127 Query: 125 PFASGSFSAAYMLHVGMNIADKSALFAEVGRVLRAQARFAIYDVMRTRHGALSYPLPWAR 184 PF + SF AA +LHVGMN+ DK+ L +E RVLR FA+YDVMR + GAL++PLPWA Sbjct: 128 PFGNASFDAAMILHVGMNLPDKAKLMSEAARVLRPGGVFAVYDVMRLKAGALTFPLPWAS 187 Query: 185 TPDANAVTSPGHYRDALSTAGFEVLSDRQRLDVALEYFARQRAQVAAGPA-----PLGVH 239 + V +P YR A + AGF V ++R R A+E+FA RA+VAA A P GV Sbjct: 188 DETMSFVATPDDYRSAATAAGFSVTTERPRGAFAVEFFATMRARVAAAQADGRKPPPGVG 247 Query: 240 TLMGARRPEMVRNMSEAISDGRIAPIEIIAR 270 +MG + N++ A+ G +AP+E++ R Sbjct: 248 LIMGGDARTKISNITAALEGGILAPVEMLLR 278