BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0197.0020.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242664.1| TetR family transcriptional regulator [Brady... 325 2e-87 ref|ZP_08627413.1| transcriptional regulator, TetR family [Brady... 323 2e-86 ref|YP_001990335.1| TetR family transcriptional regulator [Rhodo... 315 3e-84 ref|YP_783594.1| TetR family transcriptional regulator [Rhodopse... 306 2e-81 ref|YP_001203327.1| TetR family transcriptional regulator [Brady... 302 2e-80 >ref|YP_001242664.1| TetR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ38758.1| transcriptional regulator, TetR family [Bradyrhizobium sp. BTAi1] Length = 224 Score = 325 bits (834), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 191/215 (88%), Positives = 201/215 (93%) Query: 1 VKRLAARRSAILSAARDAAAAGGMAAVQIAPVAVRANVAAGTVYRYFPSKAELISELITE 60 VKRLAARRSAIL+AAR+ AA GGM+AVQIAPVAVRANVAAGTVYRYFPSKA+LISELI E Sbjct: 10 VKRLAARRSAILAAARETAAEGGMSAVQIAPVAVRANVAAGTVYRYFPSKADLISELIAE 69 Query: 61 VSRDELTAIRRAADAAPGPSSALAAAVTTIAVHVLSQRKLAWGILAEPVDVDVTASRLAS 120 VSRDEL A+RRAADAAPGPSSALAAAV+T+AVHVLSQRKLAWGILAEPVDVDVTASRLAS Sbjct: 70 VSRDELAAVRRAADAAPGPSSALAAAVSTVAVHVLSQRKLAWGILAEPVDVDVTASRLAS 129 Query: 121 RRDISGELAMRIDAAVRAGHLPAQDTALAATALLGALHEALVGPLAPANLDDPIKLRDAV 180 RRDI GE+A RIDAAVRAGHLPAQDT LAATALLGALHEALVGPLAP +LDDP KLRD V Sbjct: 130 RRDIVGEIASRIDAAVRAGHLPAQDTQLAATALLGALHEALVGPLAPDHLDDPAKLRDTV 189 Query: 181 QTVTLLALRAVGVMDARARGLVVQATTPAKALVGA 215 Q VTLLALRAVGVMDARARGLVVQA P K+LVGA Sbjct: 190 QAVTLLALRAVGVMDARARGLVVQAVLPVKSLVGA 224 >ref|ZP_08627413.1| transcriptional regulator, TetR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10039.1| transcriptional regulator, TetR family [Bradyrhizobiaceae bacterium SG-6C] Length = 230 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 178/208 (85%), Positives = 193/208 (92%) Query: 1 VKRLAARRSAILSAARDAAAAGGMAAVQIAPVAVRANVAAGTVYRYFPSKAELISELITE 60 VKRLAARR+AIL+AARDAAA GGMAAVQIAPVA RANVAAGTVYRYFPSKAELISELI + Sbjct: 10 VKRLAARRNAILAAARDAAAEGGMAAVQIAPVATRANVAAGTVYRYFPSKAELISELIAD 69 Query: 61 VSRDELTAIRRAADAAPGPSSALAAAVTTIAVHVLSQRKLAWGILAEPVDVDVTASRLAS 120 VSR ELTAIRRAADAAPGPSSALAAAVTTIAVHV+S RKLAWGILAEPVDVDVT SR+AS Sbjct: 70 VSRAELTAIRRAADAAPGPSSALAAAVTTIAVHVVSNRKLAWGILAEPVDVDVTESRVAS 129 Query: 121 RRDISGELAMRIDAAVRAGHLPAQDTALAATALLGALHEALVGPLAPANLDDPIKLRDAV 180 RR+I+ EL RI+AAVRAGHLPAQD +LAATAL+GALHE+LVGPLA AN+DDP+KLRDAV Sbjct: 130 RREIAAELEARIEAAVRAGHLPAQDISLAATALIGALHESLVGPLASANIDDPVKLRDAV 189 Query: 181 QTVTLLALRAVGVMDARARGLVVQATTP 208 Q +TL ALRAVGV+DARARGLVVQA P Sbjct: 190 QAITLFALRAVGVLDARARGLVVQAVMP 217 >ref|YP_001990335.1| TetR family transcriptional regulator [Rhodopseudomonas palustris TIE-1] gb|ACE99859.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris TIE-1] Length = 224 Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 186/215 (86%), Positives = 201/215 (93%) Query: 1 VKRLAARRSAILSAARDAAAAGGMAAVQIAPVAVRANVAAGTVYRYFPSKAELISELITE 60 VKRLAARRSAIL+AAR+ AA GGMAAVQIAPVA RA VAAGTVYRYFPSKA+LISELI + Sbjct: 10 VKRLAARRSAILAAARETAAEGGMAAVQIAPVAARAKVAAGTVYRYFPSKADLISELIAD 69 Query: 61 VSRDELTAIRRAADAAPGPSSALAAAVTTIAVHVLSQRKLAWGILAEPVDVDVTASRLAS 120 VSRDEL AIRRAADAAPGPSSALAAAVTT+AVHVLS RKLAWGILAEPVDVDV+ASRLAS Sbjct: 70 VSRDELAAIRRAADAAPGPSSALAAAVTTVAVHVLSHRKLAWGILAEPVDVDVSASRLAS 129 Query: 121 RRDISGELAMRIDAAVRAGHLPAQDTALAATALLGALHEALVGPLAPANLDDPIKLRDAV 180 RR+I+GE+ +RI AAVRAGHLPAQDTALA+TALLGA+HE+LVGPLAP NLDDP KLRDAV Sbjct: 130 RREIAGEIELRITAAVRAGHLPAQDTALASTALLGAVHESLVGPLAPDNLDDPAKLRDAV 189 Query: 181 QTVTLLALRAVGVMDARARGLVVQATTPAKALVGA 215 QTVTLLALRAVGVMDARARGLVVQA P ++LVGA Sbjct: 190 QTVTLLALRAVGVMDARARGLVVQAVVPPRSLVGA 224 >ref|YP_783594.1| TetR family transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ08614.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris BisA53] Length = 224 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 168/194 (86%), Positives = 181/194 (93%) Query: 22 GGMAAVQIAPVAVRANVAAGTVYRYFPSKAELISELITEVSRDELTAIRRAADAAPGPSS 81 GGMAAVQIAPVA+RA+VAAGTVYRYFPSKA+LISELI EV+RDEL AIRRAADAAPGPSS Sbjct: 31 GGMAAVQIAPVAMRAHVAAGTVYRYFPSKADLISELIAEVTRDELAAIRRAADAAPGPSS 90 Query: 82 ALAAAVTTIAVHVLSQRKLAWGILAEPVDVDVTASRLASRRDISGELAMRIDAAVRAGHL 141 ALAA+VTT+AVHVLS RKLAWGILAEPVDVDV++SRL SRR I+GEL RI AAVRAGHL Sbjct: 91 ALAASVTTVAVHVLSNRKLAWGILAEPVDVDVSSSRLESRRAIAGELETRIAAAVRAGHL 150 Query: 142 PAQDTALAATALLGALHEALVGPLAPANLDDPIKLRDAVQTVTLLALRAVGVMDARARGL 201 PAQDTA+AATALLGALHEALVGPLAP N+DDP +LRDAVQTVTLLALRAVGVMDARARGL Sbjct: 151 PAQDTAIAATALLGALHEALVGPLAPDNVDDPARLRDAVQTVTLLALRAVGVMDARARGL 210 Query: 202 VVQATTPAKALVGA 215 VVQA PA+ LVGA Sbjct: 211 VVQAVMPARTLVGA 224 >ref|YP_001203327.1| TetR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL75090.1| putative transcriptional regulator, TetR family [Bradyrhizobium sp. ORS 278] Length = 224 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 188/215 (87%), Positives = 200/215 (93%) Query: 1 VKRLAARRSAILSAARDAAAAGGMAAVQIAPVAVRANVAAGTVYRYFPSKAELISELITE 60 VKRLAARRSAIL+AAR+AAA GGM+AVQIAPVAVRANVAAGTVYRYFPSKA+LISELI E Sbjct: 10 VKRLAARRSAILAAAREAAAEGGMSAVQIAPVAVRANVAAGTVYRYFPSKADLISELIAE 69 Query: 61 VSRDELTAIRRAADAAPGPSSALAAAVTTIAVHVLSQRKLAWGILAEPVDVDVTASRLAS 120 VSRDEL A+RRAADAAPGPSSALAAAV+T+AVHVLSQRKLAWGILAEPVDVDVTASR+AS Sbjct: 70 VSRDELAAVRRAADAAPGPSSALAAAVSTVAVHVLSQRKLAWGILAEPVDVDVTASRIAS 129 Query: 121 RRDISGELAMRIDAAVRAGHLPAQDTALAATALLGALHEALVGPLAPANLDDPIKLRDAV 180 RR+I GE+A RIDAAVRAGHLPAQDT LAATALLGALHEALVGPLA L+DP KLRD V Sbjct: 130 RREIVGEIASRIDAAVRAGHLPAQDTQLAATALLGALHEALVGPLATDTLEDPAKLRDTV 189 Query: 181 QTVTLLALRAVGVMDARARGLVVQATTPAKALVGA 215 Q VTLLALRAVGVMDARARGLVVQA P K+LVGA Sbjct: 190 QAVTLLALRAVGVMDARARGLVVQAVLPVKSLVGA 224