BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0197.0016.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_576508.1| hypothetical protein Nham_1220 [Nitrobacter ham...   185   2e-45
ref|NP_773776.1| hypothetical protein bll7136 [Bradyrhizobium ja...   179   9e-44
ref|ZP_01047057.1| hypothetical protein NB311A_10895 [Nitrobacte...   178   3e-43
ref|ZP_07025261.1| protein of unknown function DUF1244 [Afipia s...   175   2e-42
ref|ZP_08627326.1| protein of unknown function DUF1244 [Bradyrhi...   172   1e-41

>ref|YP_576508.1| hypothetical protein Nham_1220 [Nitrobacter hamburgensis X14]
 gb|ABE62048.1| protein of unknown function DUF1244 [Nitrobacter hamburgensis X14]
          Length = 100

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 96/100 (96%)

Query: 11  MSIDDKTRTELEAAVFRRLVSHLRNRTDVQNIDLMNLAGFCRNCLSNWMKEEADAKGLAV 70
           M+IDDKT+TELEAAVFRRLV+HL++R+DVQNIDLMNLAGFCRNCLSNW+KE ADAKG  +
Sbjct: 1   MTIDDKTKTELEAAVFRRLVAHLQSRSDVQNIDLMNLAGFCRNCLSNWLKEAADAKGAVM 60

Query: 71  SKDESREAVYGMPYEEWKAKHQGSATPEQLAAMKKAQSGH 110
           +KD+SREAVYGMPYE WKA+HQG+ATP+QLAAMKK+QSGH
Sbjct: 61  TKDDSREAVYGMPYETWKAQHQGAATPDQLAAMKKSQSGH 100


>ref|NP_773776.1| hypothetical protein bll7136 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52401.1| bll7136 [Bradyrhizobium japonicum USDA 110]
          Length = 102

 Score =  179 bits (455), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 83/102 (81%), Positives = 92/102 (90%), Gaps = 1/102 (0%)

Query: 10  IMSIDDKTRTELEAAVFRRLVSHLRNRTDVQNIDLMNLAGFCRNCLSNWMKEEADAKGLA 69
           +M+IDDKTRTELEAA FRRLV HLR RTDVQNIDLMNLAGFCRNCLSNW+K+ ADA+G+A
Sbjct: 1   MMAIDDKTRTELEAAAFRRLVDHLRERTDVQNIDLMNLAGFCRNCLSNWLKDAADAQGVA 60

Query: 70  VSKDESREAVYGMPYEEWKAKHQGSATPEQLAAMKKAQS-GH 110
           +SKDESREAVYGMPYE WKAKHQG+ATPEQ+ AMKK    GH
Sbjct: 61  LSKDESREAVYGMPYETWKAKHQGTATPEQIEAMKKVHPHGH 102


>ref|ZP_01047057.1| hypothetical protein NB311A_10895 [Nitrobacter sp. Nb-311A]
 gb|EAQ34962.1| hypothetical protein NB311A_10895 [Nitrobacter sp. Nb-311A]
          Length = 100

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 81/100 (81%), Positives = 89/100 (89%)

Query: 11  MSIDDKTRTELEAAVFRRLVSHLRNRTDVQNIDLMNLAGFCRNCLSNWMKEEADAKGLAV 70
           M+IDD+TRTELEAAVFRRLV HLR+R+DVQNI+LMNLAGFCRNCLSNW+KE ADAKG  +
Sbjct: 1   MTIDDRTRTELEAAVFRRLVEHLRSRSDVQNIELMNLAGFCRNCLSNWLKEAADAKGAVL 60

Query: 71  SKDESREAVYGMPYEEWKAKHQGSATPEQLAAMKKAQSGH 110
           +KDESREAVYGMPYE WKAKHQ  ATPEQLAAMK    GH
Sbjct: 61  TKDESREAVYGMPYETWKAKHQSEATPEQLAAMKTNPGGH 100


>ref|ZP_07025261.1| protein of unknown function DUF1244 [Afipia sp. 1NLS2]
 gb|EFI52403.1| protein of unknown function DUF1244 [Afipia sp. 1NLS2]
          Length = 100

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/100 (79%), Positives = 90/100 (90%)

Query: 11  MSIDDKTRTELEAAVFRRLVSHLRNRTDVQNIDLMNLAGFCRNCLSNWMKEEADAKGLAV 70
           M+ID  T+TELEAAVFRRLV+HL+ RTDVQNID+MNLAGFCRNCLSNWMK+ AD KG+ +
Sbjct: 1   MAIDKATQTELEAAVFRRLVAHLQKRTDVQNIDMMNLAGFCRNCLSNWMKDAADEKGVPM 60

Query: 71  SKDESREAVYGMPYEEWKAKHQGSATPEQLAAMKKAQSGH 110
           +KDE REAVYGMPYEEWKAK+Q  ATPEQ+AAMKKA SGH
Sbjct: 61  TKDEGREAVYGMPYEEWKAKYQSEATPEQIAAMKKAASGH 100


>ref|ZP_08627326.1| protein of unknown function DUF1244 [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP09952.1| protein of unknown function DUF1244 [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 100

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 88/100 (88%)

Query: 11  MSIDDKTRTELEAAVFRRLVSHLRNRTDVQNIDLMNLAGFCRNCLSNWMKEEADAKGLAV 70
           M+IDDKTRTELEAA FRRLV+HLR RTDVQNI+LMNLAGFCRNCLSNW+K+ AD KG+ +
Sbjct: 1   MAIDDKTRTELEAAAFRRLVTHLRGRTDVQNIELMNLAGFCRNCLSNWLKDAADEKGVPL 60

Query: 71  SKDESREAVYGMPYEEWKAKHQGSATPEQLAAMKKAQSGH 110
           +KDESREAVYGMPYE WKA +Q  ATP+Q+AAMKK   GH
Sbjct: 61  TKDESREAVYGMPYETWKATYQSEATPDQVAAMKKTHPGH 100