BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0197.0005.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773764.1| NAD(P)+ transhydrogenase subunit beta [Bradyrhi... 466 e-129 ref|ZP_08626986.1| NAD(P) transhydrogenase subunit beta [Bradyrh... 463 e-128 ref|ZP_07026139.1| NAD(P)(+) transhydrogenase (AB-specific) [Afi... 463 e-128 ref|ZP_07025251.1| NAD(P)(+) transhydrogenase (AB-specific) [Afi... 459 e-127 ref|YP_576517.1| NAD(P) transhydrogenase, beta subunit [Nitrobac... 458 e-127 >ref|NP_773764.1| NAD(P)+ transhydrogenase subunit beta [Bradyrhizobium japonicum USDA 110] dbj|BAC52389.1| NAD(P)+ transhydrogenase beta chain [Bradyrhizobium japonicum USDA 110] Length = 465 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 253/273 (92%), Positives = 265/273 (97%) Query: 1 MSANLSALLYLVAGVLFILSLRGLSSPASSRQGNMFGMIGMAIAVGTTLASHPPADGVAW 60 M+ANLSA LYLVAGVLFILSLRGLSSPASSRQGN+FGMIGMAIAV TTLA+HPPADG+AW Sbjct: 1 MNANLSAFLYLVAGVLFILSLRGLSSPASSRQGNLFGMIGMAIAVATTLANHPPADGLAW 60 Query: 61 VLVILAVAIGGGIGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGTP 120 VLVI+ +AIGG IGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGTP Sbjct: 61 VLVIVGIAIGGAIGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGTP 120 Query: 121 GNIHPQSLVEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILPFRHVINIVLALALVFF 180 GNIH QSLVEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILPFRH+INI LA+ALVFF Sbjct: 121 GNIHGQSLVEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILPFRHIINIALAVALVFF 180 Query: 181 IVGLVMSGSALDFWLITIIALALGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 IVGLV++GSA DFW+I I+ALALGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN Sbjct: 181 IVGLVLTGSAFDFWMIVILALALGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 Query: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 SALIITGALVGSSGAILSYIMCHAMNRSFISVI Sbjct: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 >ref|ZP_08626986.1| NAD(P) transhydrogenase subunit beta [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10266.1| NAD(P) transhydrogenase subunit beta [Bradyrhizobiaceae bacterium SG-6C] Length = 465 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 253/273 (92%), Positives = 261/273 (95%) Query: 1 MSANLSALLYLVAGVLFILSLRGLSSPASSRQGNMFGMIGMAIAVGTTLASHPPADGVAW 60 M+ANL+ALLYLVAGVLFILSLRGLSSPASSRQGN+FGMIGMAIA+GTTLASHPPADGVAW Sbjct: 1 MNANLAALLYLVAGVLFILSLRGLSSPASSRQGNLFGMIGMAIAIGTTLASHPPADGVAW 60 Query: 61 VLVILAVAIGGGIGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGTP 120 VLVIL +AIGG IGAVIAR+VPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIG P Sbjct: 61 VLVILGIAIGGAIGAVIARKVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGKP 120 Query: 121 GNIHPQSLVEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILPFRHVINIVLALALVFF 180 G IH SL+EMSLGVAIGALTFTGSVIAFLKLSARMSGAPIIL RH+INI LALALVFF Sbjct: 121 GQIHAASLIEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILSGRHIINIALALALVFF 180 Query: 181 IVGLVMSGSALDFWLITIIALALGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 I GLV SGSALDFWLITIIAL LGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN Sbjct: 181 IFGLVRSGSALDFWLITIIALVLGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 Query: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 SALIITGALVGSSGAILSYIMCHAMNRSFISVI Sbjct: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 >ref|ZP_07026139.1| NAD(P)(+) transhydrogenase (AB-specific) [Afipia sp. 1NLS2] gb|EFI53281.1| NAD(P)(+) transhydrogenase (AB-specific) [Afipia sp. 1NLS2] Length = 467 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 242/273 (88%), Positives = 254/273 (93%) Query: 1 MSANLSALLYLVAGVLFILSLRGLSSPASSRQGNMFGMIGMAIAVGTTLASHPPADGVAW 60 M+ANLSALLYLVAGVLFILSLRGLSSPASSRQGN FGMIGMAIAV TTLA+HPP W Sbjct: 1 MNANLSALLYLVAGVLFILSLRGLSSPASSRQGNFFGMIGMAIAVATTLAAHPPTSATGW 60 Query: 61 VLVILAVAIGGGIGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGTP 120 +LVIL VAIGG IGAVIA+RVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAP AF IGT Sbjct: 61 ILVILGVAIGGSIGAVIAKRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPTAFGIGTH 120 Query: 121 GNIHPQSLVEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILPFRHVINIVLALALVFF 180 G+IH QSL+EMSLGVAIGALTFTGSVIAF+KLS RMSGAPIILP RH+INI LALALVFF Sbjct: 121 GSIHAQSLIEMSLGVAIGALTFTGSVIAFMKLSGRMSGAPIILPARHIINIALALALVFF 180 Query: 181 IVGLVMSGSALDFWLITIIALALGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 I GL++S SA+DFWLITIIAL LGVL+IIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN Sbjct: 181 IYGLIVSQSAVDFWLITIIALVLGVLLIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 Query: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 SALIITGALVGSSGAILSYIMCHAMNRSFISVI Sbjct: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 >ref|ZP_07025251.1| NAD(P)(+) transhydrogenase (AB-specific) [Afipia sp. 1NLS2] gb|EFI52393.1| NAD(P)(+) transhydrogenase (AB-specific) [Afipia sp. 1NLS2] Length = 467 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 240/273 (87%), Positives = 253/273 (92%) Query: 1 MSANLSALLYLVAGVLFILSLRGLSSPASSRQGNMFGMIGMAIAVGTTLASHPPADGVAW 60 M+ANLSALLYLVAGVLFILSLRGLSSPASSRQGN FGM+GMAIAV TTLA+HPPA W Sbjct: 1 MNANLSALLYLVAGVLFILSLRGLSSPASSRQGNFFGMVGMAIAVATTLAAHPPASATGW 60 Query: 61 VLVILAVAIGGGIGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGTP 120 +LV+L +AIGG IGAVIA+RVPMT+MPELVAAFHSLVGMAAVLVAAGAFYAP AF IGT Sbjct: 61 ILVLLGIAIGGSIGAVIAKRVPMTAMPELVAAFHSLVGMAAVLVAAGAFYAPTAFGIGTH 120 Query: 121 GNIHPQSLVEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILPFRHVINIVLALALVFF 180 G IH QSLVEMSLGVAIGALTFTGSVIAF KLS RMSGAPIILP RH+INIVLALAL+FF Sbjct: 121 GAIHAQSLVEMSLGVAIGALTFTGSVIAFAKLSGRMSGAPIILPARHIINIVLALALMFF 180 Query: 181 IVGLVMSGSALDFWLITIIALALGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 I GL+ S SA+DFWLITIIAL LGVL+IIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN Sbjct: 181 IYGLISSQSAVDFWLITIIALVLGVLLIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 Query: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 SALIITGALVGSSGAILSYIMCHAMNRSFISVI Sbjct: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 >ref|YP_576517.1| NAD(P) transhydrogenase, beta subunit [Nitrobacter hamburgensis X14] gb|ABE62057.1| NAD(P) transhydrogenase, beta subunit [Nitrobacter hamburgensis X14] Length = 466 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 252/273 (92%), Positives = 260/273 (95%) Query: 1 MSANLSALLYLVAGVLFILSLRGLSSPASSRQGNMFGMIGMAIAVGTTLASHPPADGVAW 60 M+ANLSALLYLVAGVLFILSLRGLSSPASSR+GN GMIGMAIAV TTLASHPPADGVAW Sbjct: 1 MNANLSALLYLVAGVLFILSLRGLSSPASSRRGNFLGMIGMAIAVATTLASHPPADGVAW 60 Query: 61 VLVILAVAIGGGIGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFDIGTP 120 +LVIL VAIGG IGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAF IGTP Sbjct: 61 LLVILGVAIGGSIGAVIARRVPMTSMPELVAAFHSLVGMAAVLVAAGAFYAPEAFGIGTP 120 Query: 121 GNIHPQSLVEMSLGVAIGALTFTGSVIAFLKLSARMSGAPIILPFRHVINIVLALALVFF 180 G+IH QSLVEMSLGVAIGALTFTGSVIAFLKLS RMSGAPIILP RH+INIVLALALVFF Sbjct: 121 GHIHAQSLVEMSLGVAIGALTFTGSVIAFLKLSGRMSGAPIILPARHIINIVLALALVFF 180 Query: 181 IVGLVMSGSALDFWLITIIALALGVLMIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 +VGLVMSGS LDFWLI I+AL LG L+IIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN Sbjct: 181 VVGLVMSGSVLDFWLIVILALLLGALLIIPIGGADMPVVISMLNSYSGWAAAGIGFTLGN 240 Query: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273 SALIITGALVGSSGAILSYIMCHAMNRSFISVI Sbjct: 241 SALIITGALVGSSGAILSYIMCHAMNRSFISVI 273