BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0197.0002.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773763.1| hypothetical protein bll7123 [Bradyrhizobium ja... 389 e-106 ref|YP_001242648.1| hypothetical protein BBta_6855 [Bradyrhizobi... 385 e-105 ref|YP_001203343.1| hypothetical protein BRADO1199 [Bradyrhizobi... 376 e-102 ref|YP_004674583.1| hypothetical protein HYPMC_0776 [Hyphomicrob... 204 1e-50 ref|YP_003756744.1| hypothetical protein Hden_2627 [Hyphomicrobi... 192 3e-47 >ref|NP_773763.1| hypothetical protein bll7123 [Bradyrhizobium japonicum USDA 110] dbj|BAC52388.1| bll7123 [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/263 (75%), Positives = 224/263 (85%) Query: 6 LAILKWLLIAAVVIYLGGLVALYVKQRELLFPIPPVGRTAPAAAGLPEAKEHVLTTGDGE 65 + I+KW+ I +Y GLV LYV+QRE+LFPIPPVGRTAP AAGLPEA+EHVL T D E Sbjct: 1 MTIVKWIAILLAAVYCAGLVVLYVRQREMLFPIPPVGRTAPDAAGLPEAEEHVLNTSDAE 60 Query: 66 KVIVWHVPAKPGRPVVLFFHGNGDFLAGRVARFKAITADGTGLVALSFHGYAGSSGSPSE 125 KVIVWHVPA+PGRPV+L+F GNGDFLAG V+RFKA+TADGTGLVALS+ GYAGSSG+PSE Sbjct: 61 KVIVWHVPARPGRPVILYFPGNGDFLAGGVSRFKAMTADGTGLVALSYRGYAGSSGAPSE 120 Query: 126 QGLLQDAAAAYAFATARYRAEQIVAWGFSLGTGVAVALAAEHPLGKLILEAPYTSTADVA 185 +GLL+DAAAAYAF TARY AE+IVAWGFSLGTGVAVA+AAEHP+ KL+LEAPYTST DVA Sbjct: 121 EGLLRDAAAAYAFTTARYAAERIVAWGFSLGTGVAVAIAAEHPVRKLVLEAPYTSTVDVA 180 Query: 186 GAHFWYVPVRLLMRDQFHSDRLIARVKAPLLIMHGADDPVIPIRFGERLFGLAHEPRQFV 245 A F + PVRLLMRDQF SD IARV PLL+MHG +D I I FGERLF LAHEP+QFV Sbjct: 181 AAAFRFAPVRLLMRDQFRSDERIARVTVPLLVMHGTNDLAISIMFGERLFALAHEPKQFV 240 Query: 246 RLPGGGHDNLDDFGAMATARRFI 268 R GGGHDNLD FGA+ TA+RFI Sbjct: 241 RFAGGGHDNLDAFGAIETAKRFI 263 >ref|YP_001242648.1| hypothetical protein BBta_6855 [Bradyrhizobium sp. BTAi1] gb|ABQ38742.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 266 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 189/264 (71%), Positives = 217/264 (82%) Query: 6 LAILKWLLIAAVVIYLGGLVALYVKQRELLFPIPPVGRTAPAAAGLPEAKEHVLTTGDGE 65 + ++KWLLI V IY L L+V+QR +LFPIPPVGRTAP+AAG P+A+EHVLT+ DGE Sbjct: 1 MTVVKWLLIVVVAIYATVLAVLFVRQRAMLFPIPPVGRTAPSAAGFPQAEEHVLTSADGE 60 Query: 66 KVIVWHVPAKPGRPVVLFFHGNGDFLAGRVARFKAITADGTGLVALSFHGYAGSSGSPSE 125 KVI WHVPAKPG +VL+F GNGDFLAG V+RFKA+TADGTGLVALS+ GYAGS+GSPSE Sbjct: 61 KVIAWHVPAKPGHKLVLYFPGNGDFLAGVVSRFKALTADGTGLVALSYRGYAGSTGSPSE 120 Query: 126 QGLLQDAAAAYAFATARYRAEQIVAWGFSLGTGVAVALAAEHPLGKLILEAPYTSTADVA 185 GLLQDAAAAYAF RY A++IVAWGFSLG+GVA A+AA+HP+ KLILEAPYTST DVA Sbjct: 121 TGLLQDAAAAYAFTRERYAADRIVAWGFSLGSGVATAIAAQHPIAKLILEAPYTSTVDVA 180 Query: 186 GAHFWYVPVRLLMRDQFHSDRLIARVKAPLLIMHGADDPVIPIRFGERLFGLAHEPRQFV 245 VPV LLMRD FHSDR IA V PLLIMHGA DP IPIRFGERLF LAH+P++FV Sbjct: 181 SEMLRVVPVSLLMRDSFHSDRRIAAVHVPLLIMHGAQDPGIPIRFGERLFALAHDPKRFV 240 Query: 246 RLPGGGHDNLDDFGAMATARRFID 269 R P GGH++LD FGA TA+ FID Sbjct: 241 RFPDGGHNDLDLFGATETAKTFID 264 >ref|YP_001203343.1| hypothetical protein BRADO1199 [Bradyrhizobium sp. ORS 278] emb|CAL75106.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 270 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/269 (69%), Positives = 218/269 (81%) Query: 2 MALALAILKWLLIAAVVIYLGGLVALYVKQRELLFPIPPVGRTAPAAAGLPEAKEHVLTT 61 M+ A+ LKWLLI V IY + L+V+QR +LFPIPPVGRTAPAAAG +A+EHVLT+ Sbjct: 1 MSGAITALKWLLIVLVAIYATVIAVLFVRQRAMLFPIPPVGRTAPAAAGFQQAEEHVLTS 60 Query: 62 GDGEKVIVWHVPAKPGRPVVLFFHGNGDFLAGRVARFKAITADGTGLVALSFHGYAGSSG 121 DGEKVI WHVP +PGR VVL+F GNGDFLAG V+RFKA+T+DGTGLVALS+ GYAGS+G Sbjct: 61 ADGEKVIAWHVPPQPGRKVVLYFPGNGDFLAGVVSRFKALTSDGTGLVALSYRGYAGSTG 120 Query: 122 SPSEQGLLQDAAAAYAFATARYRAEQIVAWGFSLGTGVAVALAAEHPLGKLILEAPYTST 181 SPSE GLLQDAAAAYAF RY ++IV WGFSLG+GVA A+AAEHP+ +LILEAPYTST Sbjct: 121 SPSETGLLQDAAAAYAFTRDRYEPQRIVVWGFSLGSGVATAIAAEHPIDRLILEAPYTST 180 Query: 182 ADVAGAHFWYVPVRLLMRDQFHSDRLIARVKAPLLIMHGADDPVIPIRFGERLFGLAHEP 241 DVA VPV LLMRD+FHSD+ IA+V PLLIMHGA DP I IRFGERLF LAH+P Sbjct: 181 VDVASDMLKVVPVSLLMRDRFHSDQRIAKVHVPLLIMHGAKDPGISIRFGERLFALAHDP 240 Query: 242 RQFVRLPGGGHDNLDDFGAMATARRFIDA 270 ++FVR P GGH++LD FGA TA+ FI+A Sbjct: 241 KRFVRFPDGGHNDLDLFGATDTAKGFINA 269 >ref|YP_004674583.1| hypothetical protein HYPMC_0776 [Hyphomicrobium sp. MC1] emb|CCB64009.1| conserved protein of unknown function [Hyphomicrobium sp. MC1] Length = 275 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 108/248 (43%), Positives = 158/248 (63%), Gaps = 2/248 (0%) Query: 6 LAILKWLLIAAVVIYLGGLVALYVKQRELLFPIPPVGRTAPAAAGLPEAKEHVLTTGDGE 65 L +LK++LI V++Y+ A+YV QR L+ PV RTAPAAAGL E V+ T DGE Sbjct: 2 LLVLKYILITLVLLYVVVAGAMYVAQRRFLYFPDPV-RTAPAAAGLVGVSELVIPTPDGE 60 Query: 66 KVIVWHVPAKPGRPVVLFFHGNGDFLAGRVARFKAITADGTGLVALSFHGYAGSSGSPSE 125 K+I W+ A+PG+P +L+ HGNG LA R + G G++ L++ G++GS+GSP+E Sbjct: 61 KLIAWYRKARPGQPTLLYLHGNGGSLAFRAETMRKYIEHGRGMLMLAYRGFSGSTGSPTE 120 Query: 126 QGLLQDAAAAY-AFATARYRAEQIVAWGFSLGTGVAVALAAEHPLGKLILEAPYTSTADV 184 + DA AY + I+ +G SLG+GVA+ +A + + LIL+APYTS ++ Sbjct: 121 TANVADAKLAYETLIRDGVKPHDIILYGESLGSGVAIQVAKDEKVEGLILDAPYTSILEL 180 Query: 185 AGAHFWYVPVRLLMRDQFHSDRLIARVKAPLLIMHGADDPVIPIRFGERLFGLAHEPRQF 244 A A F ++PVRLL++D++ S + I V P+ IMHG D V+P+ G RLF A+EP++ Sbjct: 181 ASAEFPWLPVRLLLKDRYESIKYIHDVHVPIFIMHGDADEVVPVEMGRRLFAAANEPKEI 240 Query: 245 VRLPGGGH 252 +PGGGH Sbjct: 241 KIIPGGGH 248 >ref|YP_003756744.1| hypothetical protein Hden_2627 [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ24423.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC 51888] Length = 272 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 105/266 (39%), Positives = 155/266 (58%), Gaps = 3/266 (1%) Query: 8 ILKWLLIAAVVIYLGGLVALYVKQRELLFPIPPVGRTAPAAAGLPEAKEHVLTTGDGEKV 67 +LK ++I V +Y +Y QR ++ P RT P AAGLP+ E +LTT DGEK+ Sbjct: 1 MLKTIIIIGVGLYAVASAVMYYAQRRFIY-FPEPSRTLPQAAGLPDVAERILTTPDGEKL 59 Query: 68 IVWHVPAKPGRPVVLFFHGNGDFLAGRVARFKAITADGTGLVALSFHGYAGSSGSPSEQG 127 I W+ A+PG+P +L+FHGNG L R + G G+ LS+ GY+GS+G PSE Sbjct: 60 IAWYGKAQPGQPTLLYFHGNGGALEYRSVSIRRYLNRGRGIFMLSYRGYSGSTGLPSEVA 119 Query: 128 LLQDAAAAY-AFATARYRAEQIVAWGFSLGTGVAVALAAEHPLGKLILEAPYTSTADVAG 186 + DA AY A ++ +G SLGTGVA +A + + +IL++P+TS D+A Sbjct: 120 NIADAKLAYDALLNEGVSPRDVILYGESLGTGVAAQVATDKKVSGVILDSPFTSMVDLAE 179 Query: 187 AHFWYVPVRLLMRDQFHSDRLIARVKAPLLIMHGADDPVIPIRFGERLFGLAHEPRQFVR 246 + ++PV LL++D++ S R I V AP+ ++HG D V+P+ G R+F A+EP++ V Sbjct: 180 QFYPWLPVSLLLKDRYESLRYIRDVHAPIFVVHGEADDVVPVGMGRRVFAAANEPKEIVT 239 Query: 247 LPGGGHDNLDDFGAMATARRFIDAAR 272 LPG GH + D A +ID R Sbjct: 240 LPGVGH-AVHDETTFAIINGWIDKLR 264