BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0196.0008.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203482.1| hypothetical protein BRADO1349 [Bradyrhizobi... 370 e-100 ref|YP_571099.1| N-formylglutamate amidohydrolase [Rhodopseudomo... 365 3e-99 ref|YP_530855.1| N-formylglutamate amidohydrolase [Rhodopseudomo... 365 4e-99 ref|YP_319048.1| N-formylglutamate amidohydrolase [Nitrobacter w... 364 9e-99 ref|YP_001242575.1| hypothetical protein BBta_6779 [Bradyrhizobi... 362 3e-98 >ref|YP_001203482.1| hypothetical protein BRADO1349 [Bradyrhizobium sp. ORS 278] emb|CAL75245.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 267 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 180/255 (70%), Positives = 204/255 (80%) Query: 10 LLASTDASPVLEHNAGGRSPFLFTCDHYGRLIPSPLGDLGLPEDELVRHIAWDIGIAGVA 69 LL S + PV E NA G S +FTCDHYGRL+P LGDLGLPE EL RHIAWDIGIAGVA Sbjct: 12 LLQSDEVPPVFEQNADGASALVFTCDHYGRLLPRALGDLGLPESELERHIAWDIGIAGVA 71 Query: 70 TRLSERLDAHLIAQRYSRLVIDCNRPPHVASSIPLISEATTVPGNEGLSREAAEMRRAQI 129 +LS LDAHL+AQRYSRLVIDCNR P +SIP+ISE TT+PGNEGL+ E AE+RR I Sbjct: 72 EQLSRALDAHLVAQRYSRLVIDCNRSPKAPNSIPMISERTTIPGNEGLTHEDAELRRRAI 131 Query: 130 FDPYHKRIDEIIDARTRQGLPTVLVSLHSFTPVYAGIARPWHIGTLYHRDTVLPPLLLKR 189 FDPYH RI ++DAR +G PT+LV+LHSFTPVYAGIARPWHIGTLY D VLPPLLLK Sbjct: 132 FDPYHDRITAMLDARKAKGRPTILVALHSFTPVYAGIARPWHIGTLYQHDNVLPPLLLKA 191 Query: 190 LRAEGDLVVGDNEPYAVSDETDYTIPAHGETRGLMNSGIEIRQDLISDQAGETAWAERLA 249 LRAE DLVVGDN+PYAV D TDYTIP HGE RGL+ SGIEIRQ+ I++ G+ WAERL Sbjct: 192 LRAEPDLVVGDNQPYAVGDNTDYTIPVHGEGRGLITSGIEIRQNEIAEPEGQQIWAERLI 251 Query: 250 RILGEIDATLRAEAL 264 RILGEI++ LR + L Sbjct: 252 RILGEIESELRGQGL 266 >ref|YP_571099.1| N-formylglutamate amidohydrolase [Rhodopseudomonas palustris BisB5] gb|ABE41198.1| N-formylglutamate amidohydrolase [Rhodopseudomonas palustris BisB5] Length = 290 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 183/264 (69%), Positives = 205/264 (77%), Gaps = 1/264 (0%) Query: 1 LNYGGGPSFLLASTDASPVLEHNAGGRSPFLFTCDHYGRLIPSPLGDLGLPEDELVRHIA 60 +N S LA +A PV+E N G SPFL CDHYGR IP LGDLGLPE EL RHIA Sbjct: 27 MNGARDESLRLAPGEA-PVIERNTAGASPFLLVCDHYGRRIPPQLGDLGLPEAELARHIA 85 Query: 61 WDIGIAGVATRLSERLDAHLIAQRYSRLVIDCNRPPHVASSIPLISEATTVPGNEGLSRE 120 WD+GIAGVA RL++ LDAHLIAQRYSRLVIDCNRPP SSIPL+SEATT+PGN+GL+R Sbjct: 86 WDVGIAGVAERLADALDAHLIAQRYSRLVIDCNRPPSAESSIPLVSEATTIPGNDGLTRA 145 Query: 121 AAEMRRAQIFDPYHKRIDEIIDARTRQGLPTVLVSLHSFTPVYAGIARPWHIGTLYHRDT 180 AE RR IFDPYH RID I AR G PTVL++LHSFTPVY G+ARPWHIGTLY D Sbjct: 146 EAEQRRRLIFDPYHARIDAAISARLAAGRPTVLLALHSFTPVYHGMARPWHIGTLYQHDR 205 Query: 181 VLPPLLLKRLRAEGDLVVGDNEPYAVSDETDYTIPAHGETRGLMNSGIEIRQDLISDQAG 240 VLPPLLL LR E LVVGDN+PYAVSD TDY+IP HGE RGL+NSGIEIRQD I+ + G Sbjct: 206 VLPPLLLAELRRESGLVVGDNQPYAVSDGTDYSIPVHGEARGLINSGIEIRQDQITSEDG 265 Query: 241 ETAWAERLARILGEIDATLRAEAL 264 + WAERLAR+L I+ATLR +AL Sbjct: 266 QAEWAERLARVLTAIEATLRDKAL 289 >ref|YP_530855.1| N-formylglutamate amidohydrolase [Rhodopseudomonas palustris BisB18] gb|ABD86536.1| N-formylglutamate amidohydrolase [Rhodopseudomonas palustris BisB18] Length = 271 Score = 365 bits (937), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 177/248 (71%), Positives = 199/248 (80%) Query: 18 PVLEHNAGGRSPFLFTCDHYGRLIPSPLGDLGLPEDELVRHIAWDIGIAGVATRLSERLD 77 PV+E N GRSP L TCDHYGR IP L +LG+ EL RHIAWDIGIAGVA RL+ LD Sbjct: 23 PVIERNVAGRSPLLLTCDHYGRAIPPQLDNLGVAPSELERHIAWDIGIAGVAERLAAALD 82 Query: 78 AHLIAQRYSRLVIDCNRPPHVASSIPLISEATTVPGNEGLSREAAEMRRAQIFDPYHKRI 137 AHLIAQRYSRLVIDCNRPP ASSIPL+SE+T +PGN+GL+++ A RR IFDPYH+RI Sbjct: 83 AHLIAQRYSRLVIDCNRPPRSASSIPLVSESTFIPGNQGLTQDQAAERRQLIFDPYHRRI 142 Query: 138 DEIIDARTRQGLPTVLVSLHSFTPVYAGIARPWHIGTLYHRDTVLPPLLLKRLRAEGDLV 197 ++ IDAR G TVLVSLHSFTP YAG+ARPWHIGTLY+RDTVLPPLLLK LR E +LV Sbjct: 143 NQAIDARLAAGRATVLVSLHSFTPSYAGVARPWHIGTLYNRDTVLPPLLLKALREEAELV 202 Query: 198 VGDNEPYAVSDETDYTIPAHGETRGLMNSGIEIRQDLISDQAGETAWAERLARILGEIDA 257 VGDNEPY V D TDYTIP HGE RGL+NSGIEIRQDLI +AG+ WAERLAR L EI+A Sbjct: 203 VGDNEPYGVDDATDYTIPVHGEQRGLINSGIEIRQDLIESEAGQAQWAERLARALSEIEA 262 Query: 258 TLRAEALV 265 TL L+ Sbjct: 263 TLHGRGLI 270 >ref|YP_319048.1| N-formylglutamate amidohydrolase [Nitrobacter winogradskyi Nb-255] gb|ABA05696.1| N-formylglutamate amidohydrolase [Nitrobacter winogradskyi Nb-255] Length = 266 Score = 364 bits (934), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 187/244 (76%), Positives = 202/244 (82%) Query: 18 PVLEHNAGGRSPFLFTCDHYGRLIPSPLGDLGLPEDELVRHIAWDIGIAGVATRLSERLD 77 PV+E N G SPFLFTCDHYGRLIP LGDLGLPE E RHIAWDIGIAGVA RLS L Sbjct: 17 PVIERNVSGLSPFLFTCDHYGRLIPDALGDLGLPESERRRHIAWDIGIAGVAERLSAALG 76 Query: 78 AHLIAQRYSRLVIDCNRPPHVASSIPLISEATTVPGNEGLSREAAEMRRAQIFDPYHKRI 137 AHLIAQRYSRLVIDCNRPPH ASSIP +SEAT +PGNE LS+ A+ RR IF+PYH+RI Sbjct: 77 AHLIAQRYSRLVIDCNRPPHAASSIPALSEATVIPGNERLSQSEADARRHAIFEPYHRRI 136 Query: 138 DEIIDARTRQGLPTVLVSLHSFTPVYAGIARPWHIGTLYHRDTVLPPLLLKRLRAEGDLV 197 E ID R + PT+LVSLHSFTPVYAG+ARPWH+GTLYHR T LPPLLL LRAEGDLV Sbjct: 137 KERIDERLARSRPTILVSLHSFTPVYAGVARPWHVGTLYHRSTELPPLLLSLLRAEGDLV 196 Query: 198 VGDNEPYAVSDETDYTIPAHGETRGLMNSGIEIRQDLISDQAGETAWAERLARILGEIDA 257 VGDNEPYAVSD TDYTIP HGE RGLMNSGIEIRQDLI D AG+ AWA+RLAR L E++A Sbjct: 197 VGDNEPYAVSDLTDYTIPVHGEARGLMNSGIEIRQDLIGDDAGQVAWADRLARALREVEA 256 Query: 258 TLRA 261 TL A Sbjct: 257 TLIA 260 >ref|YP_001242575.1| hypothetical protein BBta_6779 [Bradyrhizobium sp. BTAi1] gb|ABQ38669.1| hypothetical protein BBta_6779 [Bradyrhizobium sp. BTAi1] Length = 267 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 180/257 (70%), Positives = 202/257 (78%) Query: 9 FLLASTDASPVLEHNAGGRSPFLFTCDHYGRLIPSPLGDLGLPEDELVRHIAWDIGIAGV 68 LL + PVLE NAGG S FLFTCDHYGRL+P LGDLGL EL RHIAWDIGIAGV Sbjct: 11 LLLQPDEVPPVLEQNAGGTSAFLFTCDHYGRLLPRALGDLGLDASELERHIAWDIGIAGV 70 Query: 69 ATRLSERLDAHLIAQRYSRLVIDCNRPPHVASSIPLISEATTVPGNEGLSREAAEMRRAQ 128 A +S LDAHL+AQRYSRLVIDCNR P ++IP+ISE TT+PGNEGL+ E A +RR Sbjct: 71 AEAVSRALDAHLVAQRYSRLVIDCNRSPGAPNAIPMISERTTIPGNEGLTHEDAALRRRA 130 Query: 129 IFDPYHKRIDEIIDARTRQGLPTVLVSLHSFTPVYAGIARPWHIGTLYHRDTVLPPLLLK 188 IFDPYH RI ++DAR G PTVLV+LHSFTPVYAGIARPWHIGTLY D VLPPLLLK Sbjct: 131 IFDPYHDRITAVLDARKAAGRPTVLVALHSFTPVYAGIARPWHIGTLYQHDRVLPPLLLK 190 Query: 189 RLRAEGDLVVGDNEPYAVSDETDYTIPAHGETRGLMNSGIEIRQDLISDQAGETAWAERL 248 LRAE DLVVGDN+PYAV + TDYTIP HGE RGL+ SGIEIRQ+ I+D G+ WAERL Sbjct: 191 ALRAEPDLVVGDNQPYAVGNGTDYTIPVHGEGRGLITSGIEIRQNEIADPEGQQRWAERL 250 Query: 249 ARILGEIDATLRAEALV 265 RILG+I+A LR + LV Sbjct: 251 IRILGDIEAELRNKGLV 267