BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0196.0005.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001242573.1| hypothetical protein BBta_6777 [Bradyrhizobi...   216   8e-55
ref|NP_773992.1| hypothetical protein bll7352 [Bradyrhizobium ja...   205   2e-51
ref|YP_001203484.1| hypothetical protein BRADO1352 [Bradyrhizobi...   199   9e-50
ref|YP_779992.1| hypothetical protein RPE_1058 [Rhodopseudomonas...   166   2e-39
ref|YP_571097.1| hypothetical protein RPD_3977 [Rhodopseudomonas...   163   8e-39

>ref|YP_001242573.1| hypothetical protein BBta_6777 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38667.1| hypothetical protein BBta_6777 [Bradyrhizobium sp. BTAi1]
          Length = 132

 Score =  216 bits (550), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 101/130 (77%), Positives = 114/130 (87%)

Query: 1   MTSDLLFVYGTLMRGFDHPMAKLLAGNAEFLGPAQCRGRLYLVKHYPGLVVSDDPADIVH 60
           MTSDLLFVYGTLMRGFDHPMA+LLA NA+F+G A CRGRLY ++HYPGLV+SDD AD+VH
Sbjct: 1   MTSDLLFVYGTLMRGFDHPMARLLAANADFVGEASCRGRLYRIQHYPGLVLSDDAADLVH 60

Query: 61  GELFCLREREAMLREFDMYEACGEGFPPPTEYVRELLEVTLADGSTREAWTYLYNWPVTE 120
           GELF LR+   MLREFDMYEACGEGF PPTEY+R+ LEVTLADG+ REAWTY+YNWPV  
Sbjct: 61  GELFRLRQPAPMLREFDMYEACGEGFAPPTEYLRQRLEVTLADGTAREAWTYVYNWPVDA 120

Query: 121 RPRIASGKFL 130
             RIASG+FL
Sbjct: 121 AARIASGRFL 130


>ref|NP_773992.1| hypothetical protein bll7352 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52617.1| bll7352 [Bradyrhizobium japonicum USDA 110]
          Length = 132

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 94/132 (71%), Positives = 114/132 (86%)

Query: 1   MTSDLLFVYGTLMRGFDHPMAKLLAGNAEFLGPAQCRGRLYLVKHYPGLVVSDDPADIVH 60
           MTSD LFVYGTL RGFDHPMA+LLAG+AEFLG A CRGRL+L+KHYPGL++SD P+D+VH
Sbjct: 1   MTSDRLFVYGTLTRGFDHPMARLLAGHAEFLGKATCRGRLFLIKHYPGLLLSDAPSDLVH 60

Query: 61  GELFCLREREAMLREFDMYEACGEGFPPPTEYVRELLEVTLADGSTREAWTYLYNWPVTE 120
           GELF +R  + +LRE DMYEACGEGFP PTEY+R+L++VTL DG+  +AWTY+YNWPV +
Sbjct: 61  GELFHMRVPDELLRELDMYEACGEGFPEPTEYLRKLIDVTLPDGTAGKAWTYVYNWPVAD 120

Query: 121 RPRIASGKFLEQ 132
            PRI SG+FLE 
Sbjct: 121 LPRIESGRFLEH 132


>ref|YP_001203484.1| hypothetical protein BRADO1352 [Bradyrhizobium sp. ORS 278]
 emb|CAL75247.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 146

 Score =  199 bits (507), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 94/129 (72%), Positives = 109/129 (84%)

Query: 2   TSDLLFVYGTLMRGFDHPMAKLLAGNAEFLGPAQCRGRLYLVKHYPGLVVSDDPADIVHG 61
           T DLLFVYGTLMRGFDHPMA+LL+ +A+F+  A C GRLY ++HYPGLV+S+D AD V G
Sbjct: 16  TPDLLFVYGTLMRGFDHPMARLLSAHADFIAEASCCGRLYRIQHYPGLVLSEDAADQVQG 75

Query: 62  ELFCLREREAMLREFDMYEACGEGFPPPTEYVRELLEVTLADGSTREAWTYLYNWPVTER 121
           ELF LR+ E MLREFDMYEACGEGF  PTEY+R+ L+VTLADGS REAWTY+YNWPV E 
Sbjct: 76  ELFRLRQPEPMLREFDMYEACGEGFAQPTEYLRQRLDVTLADGSVREAWTYVYNWPVDEA 135

Query: 122 PRIASGKFL 130
            RIASG+FL
Sbjct: 136 SRIASGRFL 144


>ref|YP_779992.1| hypothetical protein RPE_1058 [Rhodopseudomonas palustris BisA53]
 gb|ABJ05012.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 131

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 93/126 (73%)

Query: 4   DLLFVYGTLMRGFDHPMAKLLAGNAEFLGPAQCRGRLYLVKHYPGLVVSDDPADIVHGEL 63
           DLL VYGTLMRGFDHPMA+LL  NA+FLG A C GRLYLV+HYPG+V SDDPAD VHG+L
Sbjct: 3   DLLLVYGTLMRGFDHPMARLLEQNADFLGEAHCAGRLYLVRHYPGMVDSDDPADRVHGQL 62

Query: 64  FCLREREAMLREFDMYEACGEGFPPPTEYVRELLEVTLADGSTREAWTYLYNWPVTERPR 123
           F LR+   +L + D YE CGEG  PP E++R    V   DG+  +A+ YLYNWP+   PR
Sbjct: 63  FRLRQPHDVLAKLDDYEGCGEGAAPPHEFIRATRSVVGPDGAAHQAFVYLYNWPLDGLPR 122

Query: 124 IASGKF 129
           IA G+F
Sbjct: 123 IADGRF 128


>ref|YP_571097.1| hypothetical protein RPD_3977 [Rhodopseudomonas palustris BisB5]
 gb|ABE41196.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 135

 Score =  163 bits (412), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 77/126 (61%), Positives = 93/126 (73%)

Query: 4   DLLFVYGTLMRGFDHPMAKLLAGNAEFLGPAQCRGRLYLVKHYPGLVVSDDPADIVHGEL 63
           D LFVYGTLMRGFD+PMA+LL+ +A++LGPA   GRLY V+HYPGL+ +DDPADIV GEL
Sbjct: 3   DRLFVYGTLMRGFDNPMARLLSSDADYLGPATMPGRLYRVRHYPGLIAADDPADIVFGEL 62

Query: 64  FCLREREAMLREFDMYEACGEGFPPPTEYVRELLEVTLADGSTREAWTYLYNWPVTERPR 123
           F LR    +L   D YE CGEG   P +Y RE+  VTL DG   EA+ Y+YNWPV  +PR
Sbjct: 63  FRLRRPHEVLPRLDDYEGCGEGVAEPAQYRREVARVTLQDGGAVEAFVYIYNWPVAGKPR 122

Query: 124 IASGKF 129
           I SG+F
Sbjct: 123 IVSGRF 128