BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0195.0105.p         (153 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001206399.1| hypothetical protein BRADO4435 [Bradyrhizobi...   249   9e-65
ref|YP_577491.1| hypothetical protein Nham_2239 [Nitrobacter ham...   242   1e-62
ref|YP_532521.1| hypothetical protein RPC_2652 [Rhodopseudomonas...   241   2e-62
ref|ZP_01047396.1| hypothetical protein NB311A_02486 [Nitrobacte...   241   3e-62
ref|YP_001240588.1| hypothetical protein BBta_4654 [Bradyrhizobi...   236   9e-61

>ref|YP_001206399.1| hypothetical protein BRADO4435 [Bradyrhizobium sp. ORS 278]
 emb|CAL78178.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 155

 Score =  249 bits (636), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 121/150 (80%), Positives = 141/150 (94%), Gaps = 1/150 (0%)

Query: 5   SARDQARDNA-ISVSAISSDRIEPDDNAWTRRLVIFLRIMAVVSVAKGLYHWAQVTGFVG 63
           SARD ARDNA +S++A+SS+R + D+N WTRRLV+FLR+MA++S+AKGLYHWAQVTGF+G
Sbjct: 6   SARDLARDNAAMSIAAMSSERRDGDENVWTRRLVLFLRVMAMLSIAKGLYHWAQVTGFIG 65

Query: 64  GEEEAFENQSMAWQTATIYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFPGIY 123
           GE++AFENQ+MAWQ AT+YFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFPGIY
Sbjct: 66  GEDDAFENQAMAWQAATVYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFPGIY 125

Query: 124 GGSLTVVGLEALMLAAYLALAWMSARERPP 153
           GG+L VVG EA+MLAAYL LAWM+ARERPP
Sbjct: 126 GGNLLVVGGEAVMLAAYLVLAWMAARERPP 155


>ref|YP_577491.1| hypothetical protein Nham_2239 [Nitrobacter hamburgensis X14]
 gb|ABE63031.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 154

 Score =  242 bits (618), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/154 (76%), Positives = 138/154 (89%), Gaps = 1/154 (0%)

Query: 1   MSDTSARDQ-ARDNAISVSAISSDRIEPDDNAWTRRLVIFLRIMAVVSVAKGLYHWAQVT 59
           MS+TS+R+Q  RDNA+SV+ ISS R E  +N WTRRLV+FLRIMA +S+A GLYHWAQVT
Sbjct: 1   MSETSSREQIPRDNAMSVAGISSVRTETVENLWTRRLVLFLRIMAALSLAAGLYHWAQVT 60

Query: 60  GFVGGEEEAFENQSMAWQTATIYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMF 119
           GF+GGE++AFENQ++AWQ AT+YFAVI+LVAAVGLWLATPWGAVVWLTTVVSMAV+ELMF
Sbjct: 61  GFIGGEDDAFENQTVAWQAATVYFAVIDLVAAVGLWLATPWGAVVWLTTVVSMAVVELMF 120

Query: 120 PGIYGGSLTVVGLEALMLAAYLALAWMSARERPP 153
           P IYGG+L VVGLE  ML AYLALAWM++RERPP
Sbjct: 121 PAIYGGNLAVVGLETAMLTAYLALAWMASRERPP 154


>ref|YP_532521.1| hypothetical protein RPC_2652 [Rhodopseudomonas palustris BisB18]
 gb|ABD88202.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 153

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/153 (82%), Positives = 143/153 (93%)

Query: 1   MSDTSARDQARDNAISVSAISSDRIEPDDNAWTRRLVIFLRIMAVVSVAKGLYHWAQVTG 60
           MSDTS RDQ+RD+AISV+A+S +R + DDN WTRRLV+FLR+MAV++VAKGLYHWAQVTG
Sbjct: 1   MSDTSNRDQSRDSAISVAAMSHERPQSDDNVWTRRLVLFLRVMAVLAVAKGLYHWAQVTG 60

Query: 61  FVGGEEEAFENQSMAWQTATIYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFP 120
           FVGGE++AFE Q MAWQTAT+YFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFP
Sbjct: 61  FVGGEDDAFEYQPMAWQTATVYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFP 120

Query: 121 GIYGGSLTVVGLEALMLAAYLALAWMSARERPP 153
            IYGGSL VV +EAL+L+AYLALAWM+ARERPP
Sbjct: 121 AIYGGSLLVVAIEALLLSAYLALAWMAARERPP 153


>ref|ZP_01047396.1| hypothetical protein NB311A_02486 [Nitrobacter sp. Nb-311A]
 gb|EAQ34667.1| hypothetical protein NB311A_02486 [Nitrobacter sp. Nb-311A]
          Length = 162

 Score =  241 bits (615), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/154 (75%), Positives = 136/154 (88%), Gaps = 1/154 (0%)

Query: 1   MSDTSARDQ-ARDNAISVSAISSDRIEPDDNAWTRRLVIFLRIMAVVSVAKGLYHWAQVT 59
           MS TS+R+Q  RD AISV+  S+ R E D+N WTRRLV+FLR+MA++S+A GLYHWAQ+T
Sbjct: 9   MSKTSSREQIPRDQAISVAGSSATRTETDENLWTRRLVLFLRVMAMLSLAFGLYHWAQLT 68

Query: 60  GFVGGEEEAFENQSMAWQTATIYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMF 119
           GF+GGE++AFENQ++AWQ AT+YFAVIELVAAVGLWLATPWGAVVWLTTVVSMAV+ELMF
Sbjct: 69  GFIGGEDDAFENQTVAWQAATVYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVVELMF 128

Query: 120 PGIYGGSLTVVGLEALMLAAYLALAWMSARERPP 153
           P IYGG L +VGLE  ML AYLALAWM+ARERPP
Sbjct: 129 PAIYGGRLAIVGLETAMLTAYLALAWMAARERPP 162


>ref|YP_001240588.1| hypothetical protein BBta_4654 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36682.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 139

 Score =  236 bits (602), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 113/139 (81%), Positives = 131/139 (94%)

Query: 15  ISVSAISSDRIEPDDNAWTRRLVIFLRIMAVVSVAKGLYHWAQVTGFVGGEEEAFENQSM 74
           +SV+A+SS+R + D+N WTRRLV+FLR+MA++S+AKGLYHWAQVTGF+GGE++AFENQ+M
Sbjct: 1   MSVAALSSERRDSDENIWTRRLVLFLRVMAMLSIAKGLYHWAQVTGFIGGEDDAFENQAM 60

Query: 75  AWQTATIYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFPGIYGGSLTVVGLEA 134
           AWQ AT+YFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFPGIYGGSL VV  EA
Sbjct: 61  AWQAATVYFAVIELVAAVGLWLATPWGAVVWLTTVVSMAVIELMFPGIYGGSLLVVAGEA 120

Query: 135 LMLAAYLALAWMSARERPP 153
           +MLAAYL LAWM+ARERPP
Sbjct: 121 VMLAAYLVLAWMAARERPP 139