BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0094.p (465 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239597.1| hypothetical protein BBta_3602 [Bradyrhizobi... 839 0.0 ref|NP_769803.1| hypothetical protein blr3163 [Bradyrhizobium ja... 839 0.0 ref|YP_001205189.1| hypothetical protein BRADO3156 [Bradyrhizobi... 835 0.0 ref|ZP_07028397.1| protein of unknown function DUF112 transmembr... 816 0.0 ref|YP_002288201.1| integral membrane protein [Oligotropha carbo... 814 0.0 >ref|YP_001239597.1| hypothetical protein BBta_3602 [Bradyrhizobium sp. BTAi1] gb|ABQ35691.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 489 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/465 (94%), Positives = 454/465 (97%) Query: 1 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 60 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA Sbjct: 25 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 84 Query: 61 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLAPWLVDFAVRFGPEDYFALMCVA 120 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFL+P+LVD AVRFGPEDYFALMCVA Sbjct: 85 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLSPYLVDIAVRFGPEDYFALMCVA 144 Query: 121 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFGIPELLDGVEVTTLAVGLF 180 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFG+PELLDGVEVTTLAVGLF Sbjct: 145 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFGVPELLDGVEVTTLAVGLF 204 Query: 181 AVGEALYVASRRHHAEEKLEPVRGSLWMTREDWRRSWKPWLRGTLFGFPIGALPAGGAEI 240 AVGEALYVASRRHH EEK+E V+GSLWMTREDW+RSWKPWLRGT FGFPIGALPAGGAEI Sbjct: 205 AVGEALYVASRRHHTEEKIEAVKGSLWMTREDWKRSWKPWLRGTAFGFPIGALPAGGAEI 264 Query: 241 PTFLSYSTERRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 300 PTFLSYSTE+RLTK+PE+FGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML Sbjct: 265 PTFLSYSTEKRLTKYPEQFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 324 Query: 301 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANGMLLVLNLPLVGLWVRLLAIPQPWLYA 360 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIAN MLLVLNLPLVGLWVRLL IP PWLYA Sbjct: 325 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTMLLVLNLPLVGLWVRLLKIPTPWLYA 384 Query: 361 GILVFATMGTIAAKPSVVELSMLAAFGVMGFLMRRFDFPIAPVVIGLILGPIAESQLRRA 420 GILVFATMGTIAAKPSVVELSMLA FGV+GFLMRRFDFPIAPVV+GLILGPIAESQLRRA Sbjct: 385 GILVFATMGTIAAKPSVVELSMLAGFGVLGFLMRRFDFPIAPVVVGLILGPIAESQLRRA 444 Query: 421 LAISLGDPMVLLQSPMSATLLGIALIALLAPFVLKGLGRFKANEH 465 LAISLGDPM LLQSP+SATLL +ALIAL+APF+LKGLGRFKANE Sbjct: 445 LAISLGDPMTLLQSPISATLLVVALIALIAPFILKGLGRFKANED 489 >ref|NP_769803.1| hypothetical protein blr3163 [Bradyrhizobium japonicum USDA 110] dbj|BAC48428.1| blr3163 [Bradyrhizobium japonicum USDA 110] Length = 500 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/465 (96%), Positives = 459/465 (98%) Query: 1 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 60 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA Sbjct: 36 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 95 Query: 61 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLAPWLVDFAVRFGPEDYFALMCVA 120 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLAPWLVDFAVRFGPEDYFALMCVA Sbjct: 96 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLAPWLVDFAVRFGPEDYFALMCVA 155 Query: 121 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFGIPELLDGVEVTTLAVGLF 180 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFG+PELLDGVEVTTLAVGLF Sbjct: 156 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFGVPELLDGVEVTTLAVGLF 215 Query: 181 AVGEALYVASRRHHAEEKLEPVRGSLWMTREDWRRSWKPWLRGTLFGFPIGALPAGGAEI 240 A+GEALYVASRRHH EEKLEPVRGSLWMT+EDW+RSWKPWLRGT+FGFPIGALPAGGAEI Sbjct: 216 ALGEALYVASRRHHTEEKLEPVRGSLWMTKEDWKRSWKPWLRGTMFGFPIGALPAGGAEI 275 Query: 241 PTFLSYSTERRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 300 PTFLSYSTE+RLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML Sbjct: 276 PTFLSYSTEKRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 335 Query: 301 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANGMLLVLNLPLVGLWVRLLAIPQPWLYA 360 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIAN MLLVLNLPLVGLWVRLLAIPQPWLYA Sbjct: 336 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANCMLLVLNLPLVGLWVRLLAIPQPWLYA 395 Query: 361 GILVFATMGTIAAKPSVVELSMLAAFGVMGFLMRRFDFPIAPVVIGLILGPIAESQLRRA 420 GILVFATMGTIAAKPSVVELSMLA FGV+GFLMRRFDFPIAPVV+GLILGPIAESQLRRA Sbjct: 396 GILVFATMGTIAAKPSVVELSMLAGFGVLGFLMRRFDFPIAPVVVGLILGPIAESQLRRA 455 Query: 421 LAISLGDPMVLLQSPMSATLLGIALIALLAPFVLKGLGRFKANEH 465 LAISLGDPM LLQSP+SATLL IAL+ALLAPFVLKG+GRFKANE Sbjct: 456 LAISLGDPMTLLQSPISATLLVIALVALLAPFVLKGMGRFKANED 500 >ref|YP_001205189.1| hypothetical protein BRADO3156 [Bradyrhizobium sp. ORS 278] emb|CAL76954.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 489 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/465 (93%), Positives = 454/465 (97%) Query: 1 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 60 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA Sbjct: 25 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 84 Query: 61 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLAPWLVDFAVRFGPEDYFALMCVA 120 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFL+P+LVD AVRFGPEDYFALMCVA Sbjct: 85 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLSPYLVDIAVRFGPEDYFALMCVA 144 Query: 121 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFGIPELLDGVEVTTLAVGLF 180 FVTVSATFGDSP+RGL SLFIGLTLGLVGIDKLTGQARLAFG+PELLDGVEVTTLAVGLF Sbjct: 145 FVTVSATFGDSPIRGLISLFIGLTLGLVGIDKLTGQARLAFGVPELLDGVEVTTLAVGLF 204 Query: 181 AVGEALYVASRRHHAEEKLEPVRGSLWMTREDWRRSWKPWLRGTLFGFPIGALPAGGAEI 240 AVGEALYVASRRHH+EEK+E V+GSLWMTREDW+RSWKPWLRGT FGFPIGALPAGGAEI Sbjct: 205 AVGEALYVASRRHHSEEKIEAVKGSLWMTREDWKRSWKPWLRGTAFGFPIGALPAGGAEI 264 Query: 241 PTFLSYSTERRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 300 PTFLSYSTERRLTK+P++FGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML Sbjct: 265 PTFLSYSTERRLTKYPDQFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 324 Query: 301 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANGMLLVLNLPLVGLWVRLLAIPQPWLYA 360 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIAN MLLVLNLPLVGLWVRLL IP PWLYA Sbjct: 325 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTMLLVLNLPLVGLWVRLLRIPTPWLYA 384 Query: 361 GILVFATMGTIAAKPSVVELSMLAAFGVMGFLMRRFDFPIAPVVIGLILGPIAESQLRRA 420 GILVFATMGTIAAKPSVVELSMLA FGV+GFLMRRFDFPIAPVV+GLILGPIAESQLRRA Sbjct: 385 GILVFATMGTIAAKPSVVELSMLAGFGVLGFLMRRFDFPIAPVVVGLILGPIAESQLRRA 444 Query: 421 LAISLGDPMVLLQSPMSATLLGIALIALLAPFVLKGLGRFKANEH 465 LAISLGDPM LLQSP+SATLL +ALIAL+APF+LKGLGRFKANE Sbjct: 445 LAISLGDPMTLLQSPISATLLVVALIALVAPFILKGLGRFKANED 489 >ref|ZP_07028397.1| protein of unknown function DUF112 transmembrane [Afipia sp. 1NLS2] gb|EFI50387.1| protein of unknown function DUF112 transmembrane [Afipia sp. 1NLS2] Length = 499 Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/465 (91%), Positives = 446/465 (95%) Query: 1 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 60 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA Sbjct: 35 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 94 Query: 61 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLAPWLVDFAVRFGPEDYFALMCVA 120 LEGNKMAKAGRGGPALAT+AIGSFVAGT+ATIGLAF+AP+LVD AV+FGPEDYFALM VA Sbjct: 95 LEGNKMAKAGRGGPALATAAIGSFVAGTLATIGLAFVAPYLVDIAVKFGPEDYFALMVVA 154 Query: 121 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFGIPELLDGVEVTTLAVGLF 180 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQ RL+FG+PELLDGVEVTTLAVGLF Sbjct: 155 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQPRLSFGVPELLDGVEVTTLAVGLF 214 Query: 181 AVGEALYVASRRHHAEEKLEPVRGSLWMTREDWRRSWKPWLRGTLFGFPIGALPAGGAEI 240 AVGEALYV SRRH AEEK+E VRGSLWMT+EDW+RSWKPWLRG FGFPIGALPAGGAEI Sbjct: 215 AVGEALYVVSRRHQAEEKIEAVRGSLWMTKEDWKRSWKPWLRGFGFGFPIGALPAGGAEI 274 Query: 241 PTFLSYSTERRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 300 PTFLSYS ERRLT HPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML Sbjct: 275 PTFLSYSAERRLTAHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 334 Query: 301 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANGMLLVLNLPLVGLWVRLLAIPQPWLYA 360 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIAN MLLVLNLPLVGLWVRLLAIPQPWLYA Sbjct: 335 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANTMLLVLNLPLVGLWVRLLAIPQPWLYA 394 Query: 361 GILVFATMGTIAAKPSVVELSMLAAFGVMGFLMRRFDFPIAPVVIGLILGPIAESQLRRA 420 GILVFATMGTIAAKPSVVEL+ML FGVMGFLMRR+DFPIAPVV+GLILGP+AESQLRRA Sbjct: 395 GILVFATMGTIAAKPSVVELTMLTGFGVMGFLMRRYDFPIAPVVVGLILGPLAESQLRRA 454 Query: 421 LAISLGDPMVLLQSPMSATLLGIALIALLAPFVLKGLGRFKANEH 465 L+ISLGDPM L+QSP+SATLLGIALIAL+ PFVLK + RFKA E Sbjct: 455 LSISLGDPMTLVQSPISATLLGIALIALIVPFVLKNMSRFKATED 499 >ref|YP_002288201.1| integral membrane protein [Oligotropha carboxidovorans OM5] ref|YP_004633699.1| hypothetical protein OCA5_c27650 [Oligotropha carboxidovorans OM5] gb|ACI92336.1| integral membrane protein [Oligotropha carboxidovorans OM5] gb|AEI03881.1| putative transmembrane protein [Oligotropha carboxidovorans OM4] gb|AEI07458.1| putative transmembrane protein [Oligotropha carboxidovorans OM5] Length = 499 Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/465 (91%), Positives = 447/465 (96%) Query: 1 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINTPGESASMATA 60 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILIN PGESASMATA Sbjct: 35 VLPGIGPALTVALLLPVTYKLDPGGSLIMFAGIYYGGMYGGSTTAILINAPGESASMATA 94 Query: 61 LEGNKMAKAGRGGPALATSAIGSFVAGTIATIGLAFLAPWLVDFAVRFGPEDYFALMCVA 120 LEGNKMAKAGRGGPALAT+AIGSFVAGT+ATIGLAF+AP+LVD AVRFGPEDYFALM VA Sbjct: 95 LEGNKMAKAGRGGPALATAAIGSFVAGTLATIGLAFVAPYLVDIAVRFGPEDYFALMVVA 154 Query: 121 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQARLAFGIPELLDGVEVTTLAVGLF 180 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQ RL+FG+PELLDGVEVTTLAVGLF Sbjct: 155 FVTVSATFGDSPVRGLTSLFIGLTLGLVGIDKLTGQPRLSFGVPELLDGVEVTTLAVGLF 214 Query: 181 AVGEALYVASRRHHAEEKLEPVRGSLWMTREDWRRSWKPWLRGTLFGFPIGALPAGGAEI 240 AVGEALYV SRRH EEK+E VRGSLWMT+EDW+RSWKPWLRG FGFPIGALPAGGAEI Sbjct: 215 AVGEALYVVSRRHQVEEKVEAVRGSLWMTKEDWKRSWKPWLRGFGFGFPIGALPAGGAEI 274 Query: 241 PTFLSYSTERRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 300 PTFLSYS ERRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML Sbjct: 275 PTFLSYSAERRLTKHPEEFGKGAIEGVAGPEAANNASAAGTLVPLLTLGLPTSATAAMML 334 Query: 301 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANGMLLVLNLPLVGLWVRLLAIPQPWLYA 360 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIAN MLLVLNLPLVGLWVRLLAIPQPWLYA Sbjct: 335 AGFQQYGLNPGPLLFAERPDLVWGLIASLFIANMMLLVLNLPLVGLWVRLLAIPQPWLYA 394 Query: 361 GILVFATMGTIAAKPSVVELSMLAAFGVMGFLMRRFDFPIAPVVIGLILGPIAESQLRRA 420 GILVFATMGTIAAKPSVVEL+ML+ FGV+GFLMRR+DFPIAPVV+GLILGP+AESQLRRA Sbjct: 395 GILVFATMGTIAAKPSVVELTMLSVFGVLGFLMRRYDFPIAPVVVGLILGPLAESQLRRA 454 Query: 421 LAISLGDPMVLLQSPMSATLLGIALIALLAPFVLKGLGRFKANEH 465 L+ISLGDPM L+QSP+SATLLGIALIAL+APF+LK + RFKA E Sbjct: 455 LSISLGDPMTLVQSPISATLLGIALIALVAPFILKNMSRFKAAED 499