BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0088.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771670.1| riboflavin synthase subunit alpha [Bradyrhizobi... 350 8e-95 ref|ZP_08630191.1| riboflavin synthase alpha chain [Bradyrhizobi... 338 2e-91 ref|YP_001206391.1| riboflavin synthase subunit alpha [Bradyrhiz... 336 1e-90 ref|YP_001240580.1| riboflavin synthase subunit alpha [Bradyrhiz... 335 3e-90 ref|YP_569804.1| riboflavin synthase subunit alpha [Rhodopseudom... 335 3e-90 >ref|NP_771670.1| riboflavin synthase subunit alpha [Bradyrhizobium japonicum USDA 110] dbj|BAC50295.1| riboflavin synthase alpha chain [Bradyrhizobium japonicum USDA 110] Length = 202 Score = 350 bits (897), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 172/202 (85%), Positives = 181/202 (89%) Query: 1 VFTGIVTDVGEITSLKQVAQGQLHRMRIACDYDQTTIADGASIACNGVCLTVVASGTADG 60 +FTGIVTD+GEI S AQGQLHR+RIAC YDQTTIADGASIACNGVCLTVVASG A G Sbjct: 1 MFTGIVTDLGEIVSFTPTAQGQLHRLRIACSYDQTTIADGASIACNGVCLTVVASGVAGG 60 Query: 61 KTWFDVDAAAETLGMTTAKHWGQGGRLNLERALKIGDELGGHIVAGHADGIATIVKREDL 120 K WFDVDAAAETL +TTAKHW G RLNLERALKIGDELGGHIVAGHADGIATIV REDL Sbjct: 61 KAWFDVDAAAETLALTTAKHWRVGTRLNLERALKIGDELGGHIVAGHADGIATIVSREDL 120 Query: 121 PDMARFELRTSRELARFIAAKGSVTLDGVSLTVNTVDDVGFSVLIIPHTLAVTTLSGWKA 180 PDMARF L T+RELARFIA KGS+TLDGVSLTVNTV DV FSVLIIPHTL VTT+ GWKA Sbjct: 121 PDMARFVLSTTRELARFIATKGSITLDGVSLTVNTVADVTFSVLIIPHTLTVTTIGGWKA 180 Query: 181 GSEVNIEVDLMARYAARLSEMK 202 G+EVNIEVDLMARYAARL+EMK Sbjct: 181 GAEVNIEVDLMARYAARLTEMK 202 >ref|ZP_08630191.1| riboflavin synthase alpha chain [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07064.1| riboflavin synthase alpha chain [Bradyrhizobiaceae bacterium SG-6C] Length = 202 Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/202 (82%), Positives = 177/202 (87%) Query: 1 VFTGIVTDVGEITSLKQVAQGQLHRMRIACDYDQTTIADGASIACNGVCLTVVASGTADG 60 +FTGI+TD+GEITSL+ AQGQLHR+RI C YDQTTIADGASIACNGVCLTVV SG G Sbjct: 1 MFTGIITDLGEITSLQPTAQGQLHRLRIVCRYDQTTIADGASIACNGVCLTVVQSGVDGG 60 Query: 61 KTWFDVDAAAETLGMTTAKHWGQGGRLNLERALKIGDELGGHIVAGHADGIATIVKREDL 120 KTWFDVDAAAETL +TTAK WG+G RLNLERALKIGDELGGHIVAGH DGIATI+ REDL Sbjct: 61 KTWFDVDAAAETLRLTTAKSWGKGTRLNLERALKIGDELGGHIVAGHVDGIATIIAREDL 120 Query: 121 PDMARFELRTSRELARFIAAKGSVTLDGVSLTVNTVDDVGFSVLIIPHTLAVTTLSGWKA 180 PDMARFELR RELA+FIAAKGSV LDG SLTVNT D FSVLIIPHTL VTTLS W+ Sbjct: 121 PDMARFELRAPRELAKFIAAKGSVVLDGASLTVNTAVDDTFSVLIIPHTLQVTTLSDWRV 180 Query: 181 GSEVNIEVDLMARYAARLSEMK 202 GSEVNIEVDLMARYAARL EMK Sbjct: 181 GSEVNIEVDLMARYAARLVEMK 202 >ref|YP_001206391.1| riboflavin synthase subunit alpha [Bradyrhizobium sp. ORS 278] emb|CAL78170.1| riboflavin synthase alpha chain [Bradyrhizobium sp. ORS 278] Length = 202 Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 163/202 (80%), Positives = 180/202 (89%) Query: 1 VFTGIVTDVGEITSLKQVAQGQLHRMRIACDYDQTTIADGASIACNGVCLTVVASGTADG 60 +FTGIVTD+GEI SL +G+LHR+RIA YDQ+TIADGASIA NGVCLTVV SG ADG Sbjct: 1 MFTGIVTDIGEIVSLTPRTEGKLHRLRIASAYDQSTIADGASIANNGVCLTVVQSGIADG 60 Query: 61 KTWFDVDAAAETLGMTTAKHWGQGGRLNLERALKIGDELGGHIVAGHADGIATIVKREDL 120 KTWF+VDAAAETL +TTAKHW G +LNLERALKIGDELGGHIV+GH DGIATIV RE+L Sbjct: 61 KTWFEVDAAAETLALTTAKHWRVGTKLNLERALKIGDELGGHIVSGHVDGIATIVSRENL 120 Query: 121 PDMARFELRTSRELARFIAAKGSVTLDGVSLTVNTVDDVGFSVLIIPHTLAVTTLSGWKA 180 PDMARF RT+RELARFIA KGS+TLDGVSLTVNTVD++ FSVLIIPHTLAVTTLS W+ Sbjct: 121 PDMARFVFRTTRELARFIATKGSITLDGVSLTVNTVDELTFSVLIIPHTLAVTTLSSWQT 180 Query: 181 GSEVNIEVDLMARYAARLSEMK 202 GSEVNIEVDLMARYAARL+EMK Sbjct: 181 GSEVNIEVDLMARYAARLTEMK 202 >ref|YP_001240580.1| riboflavin synthase subunit alpha [Bradyrhizobium sp. BTAi1] gb|ABQ36674.1| riboflavin synthase alpha chain [Bradyrhizobium sp. BTAi1] Length = 202 Score = 335 bits (858), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 162/202 (80%), Positives = 179/202 (88%) Query: 1 VFTGIVTDVGEITSLKQVAQGQLHRMRIACDYDQTTIADGASIACNGVCLTVVASGTADG 60 +FTGIVTD+GEI SL +G+LHR+RIAC YDQ TIADGASIA NGVCLTVV SG DG Sbjct: 1 MFTGIVTDIGEIVSLTPRTEGKLHRLRIACSYDQATIADGASIANNGVCLTVVQSGVLDG 60 Query: 61 KTWFDVDAAAETLGMTTAKHWGQGGRLNLERALKIGDELGGHIVAGHADGIATIVKREDL 120 KTWF+VDAAAETL +TTA+HW G RLNLERALKIGDELGGHIV+GH DGIATIV RE+L Sbjct: 61 KTWFEVDAAAETLALTTARHWRVGTRLNLERALKIGDELGGHIVSGHVDGIATIVSRENL 120 Query: 121 PDMARFELRTSRELARFIAAKGSVTLDGVSLTVNTVDDVGFSVLIIPHTLAVTTLSGWKA 180 PDMARF +T+RELARFIA KGS+TLDGVSLTVNTVDD+ FSVLIIPHTL+VTTLS W A Sbjct: 121 PDMARFVFKTTRELARFIATKGSITLDGVSLTVNTVDDLTFSVLIIPHTLSVTTLSSWHA 180 Query: 181 GSEVNIEVDLMARYAARLSEMK 202 GS+VNIEVDLMARYAARL+EMK Sbjct: 181 GSDVNIEVDLMARYAARLTEMK 202 >ref|YP_569804.1| riboflavin synthase subunit alpha [Rhodopseudomonas palustris BisB5] gb|ABE39903.1| riboflavin synthase, alpha subunit [Rhodopseudomonas palustris BisB5] Length = 202 Score = 335 bits (858), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 163/202 (80%), Positives = 176/202 (87%) Query: 1 VFTGIVTDVGEITSLKQVAQGQLHRMRIACDYDQTTIADGASIACNGVCLTVVASGTADG 60 +FTGIVTD+GEI L VAQGQLHR+RI C +DQTTIADGASIA NGVC+TVV SG A G Sbjct: 1 MFTGIVTDIGEIEKLTPVAQGQLHRLRILCSFDQTTIADGASIASNGVCMTVVGSGVAGG 60 Query: 61 KTWFDVDAAAETLGMTTAKHWGQGGRLNLERALKIGDELGGHIVAGHADGIATIVKREDL 120 +TW++VDA AETLG+TTAKHW G RLNLERALKIGDELGGHIV GH DGIATI RE+L Sbjct: 61 RTWYEVDAGAETLGLTTAKHWSVGTRLNLERALKIGDELGGHIVTGHVDGIATIESREEL 120 Query: 121 PDMARFELRTSRELARFIAAKGSVTLDGVSLTVNTVDDVGFSVLIIPHTLAVTTLSGWKA 180 PDMARF L TSRELARFIAAKGSVTLDG SLTVNTVDD FSVLIIPHTL+ T LSGW+ Sbjct: 121 PDMARFTLSTSRELARFIAAKGSVTLDGTSLTVNTVDDTRFSVLIIPHTLSATILSGWQQ 180 Query: 181 GSEVNIEVDLMARYAARLSEMK 202 GSEVN+EVDLMARYAARLSEMK Sbjct: 181 GSEVNLEVDLMARYAARLSEMK 202