BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0078.p (159 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08630182.1| ubiquinol-cytochrome c chaperone [Bradyrhizob... 203 8e-51 ref|YP_576864.1| ubiquinol-cytochrome C chaperone [Nitrobacter h... 198 2e-49 ref|YP_001240568.1| hypothetical protein BBta_4634 [Bradyrhizobi... 197 5e-49 ref|YP_781740.1| ubiquinol-cytochrome C chaperone [Rhodopseudomo... 194 3e-48 ref|YP_532541.1| ubiquinol-cytochrome C chaperone [Rhodopseudomo... 194 4e-48 >ref|ZP_08630182.1| ubiquinol-cytochrome c chaperone [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07055.1| ubiquinol-cytochrome c chaperone [Bradyrhizobiaceae bacterium SG-6C] Length = 184 Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 106/154 (68%), Positives = 124/154 (80%) Query: 1 MIVTQAREPLFYRDLGVPDTVNGRFDLLLMHLWLVLRRLKSVEGGAGLSQALFDHFCIDM 60 MIV QAREP FY DLGV DTVNGRFDLL++HLWLVLRR++ ++GG+ LSQALFDHFC DM Sbjct: 24 MIVAQAREPAFYADLGVRDTVNGRFDLLILHLWLVLRRMQRLDGGSALSQALFDHFCADM 83 Query: 61 DDNLREMGVGDLTVPKRMQAFGEAFYGRTAAYDLALTDSETALAESFCKNILNGQNIDKA 120 DDNLREMGVGDLTVPKRMQAFGEAFYGR+AAYDLA S+ LA++ +N+ NG+++D A Sbjct: 84 DDNLREMGVGDLTVPKRMQAFGEAFYGRSAAYDLAFAGSDEDLAQALSRNVFNGESMDSA 143 Query: 121 RQLAVYARVAMEGLARADLAALAKGAWRFPVPQA 154 R+LA Y R A + L AD L KG WRFP P A Sbjct: 144 RRLAAYVRKAGDSLDAADAETLRKGNWRFPAPAA 177 >ref|YP_576864.1| ubiquinol-cytochrome C chaperone [Nitrobacter hamburgensis X14] gb|ABE62404.1| Ubiquinol-cytochrome C chaperone [Nitrobacter hamburgensis X14] Length = 179 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 101/152 (66%), Positives = 120/152 (78%), Gaps = 2/152 (1%) Query: 1 MIVTQAREPLFYRDLGVPDTVNGRFDLLLMHLWLVLRRLKSVEGGAGLSQALFDHFCIDM 60 MIV QAREPLFYR LGVPDTV+GRFD++L+HLW+VLRRLK G GL QALFDHFC DM Sbjct: 26 MIVAQAREPLFYRALGVPDTVDGRFDMVLLHLWMVLRRLKPGHGD-GLWQALFDHFCSDM 84 Query: 61 DDNLREMGVGDLTVPKRMQAFGEAFYGRTAAYDLALTDSETALAESFCKNILNGQNIDKA 120 D NLREMGVGDL+VPKRM+AFGEAFYGR+ AYD AL + + LA++ KNI NG++I+KA Sbjct: 85 DANLREMGVGDLSVPKRMRAFGEAFYGRSTAYDRALAEGQEPLAQALDKNIYNGRDIEKA 144 Query: 121 RQLAVYARVAMEGLARADLAALAKGAWRFPVP 152 R+LA Y A+ LA +D A L+ G RFP P Sbjct: 145 RRLAAYTADAIATLAGSDEATLSAGL-RFPDP 175 >ref|YP_001240568.1| hypothetical protein BBta_4634 [Bradyrhizobium sp. BTAi1] gb|ABQ36662.1| hypothetical protein BBta_4634 [Bradyrhizobium sp. BTAi1] Length = 181 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 106/152 (69%), Positives = 117/152 (76%), Gaps = 2/152 (1%) Query: 1 MIVTQAREPLFYRDLGVPDTVNGRFDLLLMHLWLVLRRLKSVEGGAGLSQALFDHFCIDM 60 MIV Q REPLFYR L VPDTV+GRFDLL+ HLWLVLRRL+ V G LSQALFD FC DM Sbjct: 25 MIVAQTREPLFYRHLNVPDTVDGRFDLLIFHLWLVLRRLRGV--GTELSQALFDRFCDDM 82 Query: 61 DDNLREMGVGDLTVPKRMQAFGEAFYGRTAAYDLALTDSETALAESFCKNILNGQNIDKA 120 DDNLREMGVGDLTVPKRMQ FGEAFYGRTAAYDLA ++SE LA++ KNILNG++ + A Sbjct: 83 DDNLREMGVGDLTVPKRMQKFGEAFYGRTAAYDLAWSESEARLADALQKNILNGEHPNGA 142 Query: 121 RQLAVYARVAMEGLARADLAALAKGAWRFPVP 152 LA YA M LA D AAL + AW FP P Sbjct: 143 AGLASYASRVMATLAALDDAALFRAAWTFPPP 174 >ref|YP_781740.1| ubiquinol-cytochrome C chaperone [Rhodopseudomonas palustris BisA53] gb|ABJ06760.1| Ubiquinol-cytochrome C chaperone [Rhodopseudomonas palustris BisA53] Length = 183 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 94/153 (61%), Positives = 112/153 (73%), Gaps = 3/153 (1%) Query: 1 MIVTQAREPLFYRDLGVPDTVNGRFDLLLMHLWLVLRRLKSVEGGAGLSQALFDHFCIDM 60 MIV QAREP FY+ GV DTVNGRF+++++HLWLVLRR + A +Q LFDHFC D+ Sbjct: 25 MIVAQAREPAFYQSFGVQDTVNGRFEMVVLHLWLVLRRAREQSDNAAFAQILFDHFCSDL 84 Query: 61 DDNLREMGVGDLTVPKRMQAFGEAFYGRTAAYDLALTDSE---TALAESFCKNILNGQNI 117 D NLREMGVGDL VPKRMQAFGEAFYGR AAYD+AL D E AL ++ +N+LNG Sbjct: 85 DANLREMGVGDLAVPKRMQAFGEAFYGRAAAYDVALADEEDSHAALTKTLSRNVLNGFGT 144 Query: 118 DKARQLAVYARVAMEGLARADLAALAKGAWRFP 150 DKA+ L Y R A+ GLA+ D AAL G +RFP Sbjct: 145 DKAKLLEAYVREALAGLAQVDSAALRSGRFRFP 177 >ref|YP_532541.1| ubiquinol-cytochrome C chaperone [Rhodopseudomonas palustris BisB18] gb|ABD88222.1| Ubiquinol-cytochrome C chaperone [Rhodopseudomonas palustris BisB18] Length = 183 Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 3/153 (1%) Query: 1 MIVTQAREPLFYRDLGVPDTVNGRFDLLLMHLWLVLRRLKSVEGGAGLSQALFDHFCIDM 60 MIV QAREP FY+ LGV D+VNGRF+++++HLWLVLR+ ++ QALFD+FC D+ Sbjct: 25 MIVAQAREPAFYKTLGVQDSVNGRFEMIVLHLWLVLRQARAQSDNVAFGQALFDYFCSDL 84 Query: 61 DDNLREMGVGDLTVPKRMQAFGEAFYGRTAAYDLALTDSET---ALAESFCKNILNGQNI 117 D NLREMGVGDLTVPKRMQ FGEAFYGR AAYD AL D + A+A++ C+N+LNG + Sbjct: 85 DANLREMGVGDLTVPKRMQKFGEAFYGRAAAYDNALADEDNPSEAMAKALCRNVLNGFGL 144 Query: 118 DKARQLAVYARVAMEGLARADLAALAKGAWRFP 150 DKAR LA Y A LAR D AAL G WRFP Sbjct: 145 DKARLLAAYVDNAAATLARVDAAALRSGRWRFP 177