BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0064.p (155 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771622.1| hypothetical protein blr4982 [Bradyrhizobium ja... 181 5e-44 ref|YP_001240551.1| hypothetical protein BBta_4617 [Bradyrhizobi... 155 2e-36 ref|YP_001206216.1| putative GcrA-like regulator [Bradyrhizobium... 153 6e-36 ref|YP_001208592.1| hypothetical protein BRADO6781 [Bradyrhizobi... 111 4e-23 ref|ZP_08628186.1| cell cycle regulator GcrA [Bradyrhizobiaceae ... 109 1e-22 >ref|NP_771622.1| hypothetical protein blr4982 [Bradyrhizobium japonicum USDA 110] dbj|BAC50247.1| blr4982 [Bradyrhizobium japonicum USDA 110] Length = 187 Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 91/158 (57%), Positives = 106/158 (67%), Gaps = 3/158 (1%) Query: 1 MIAIQETWTPERVDQLKIYFEAGLSCRDIAVNIGVSRNAVIGKLSRLNLTRTTPDERRAR 60 M + TWT ER++ LK +FEAGLSCR+IA +IGVSRNAVIGKLSRLNLTR+ E R Sbjct: 30 MPVLSPTWTDERIELLKQHFEAGLSCREIAADIGVSRNAVIGKLSRLNLTRSRAVEDRRL 89 Query: 61 RKKFAAHAAQRATAKQQLGLLQAVY---EQPCDDAPIVSANNCSLFELSEQRCRWPISTP 117 + A +RA + Q +L +Y + P PI AN CSL ELSE RCRWPISTP Sbjct: 90 ERSLAPPRTRRAVPRLQYEMLATIYGETDAPVVAGPIDDANRCSLLELSENRCRWPISTP 149 Query: 118 GADDFCFCGNTPLGGMPYCSGHYRLAYQAGSRQRAMRG 155 G DDFCFCGNT G YC+GH RLAY+ SR R MRG Sbjct: 150 GEDDFCFCGNTAPDGQSYCAGHSRLAYRPNSRARMMRG 187 >ref|YP_001240551.1| hypothetical protein BBta_4617 [Bradyrhizobium sp. BTAi1] gb|ABQ36645.1| hypothetical protein BBta_4617 [Bradyrhizobium sp. BTAi1] Length = 159 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/152 (54%), Positives = 101/152 (66%), Gaps = 10/152 (6%) Query: 5 QETWTPERVDQLKIYFEAGLSCRDIAVNIGVSRNAVIGKLSRLNLTRTTP-DERRARRKK 63 Q TWT ER+ LK +FEAGL+CR+IA +GVSRNAVIGK+SRL LTR D RR R + Sbjct: 8 QPTWTEERLRALKQHFEAGLTCREIAAELGVSRNAVIGKISRLALTRDNGGDTRRVVRAE 67 Query: 64 FAAHAAQRATAKQQLGLLQAVYEQPCDD-------APIVSANNCSLFELSEQRCRWPIST 116 A A+R K + +L+AV P P+ N CSLFELS++RCRWPIST Sbjct: 68 NARDGARRPVPKLRRRILRAVSNDPPPIMIEEPPAGPV--ENGCSLFELSKERCRWPIST 125 Query: 117 PGADDFCFCGNTPLGGMPYCSGHYRLAYQAGS 148 PGADDFCFCG+ PL G+PYC H R+AY+ S Sbjct: 126 PGADDFCFCGSKPLDGLPYCPSHTRMAYRVAS 157 >ref|YP_001206216.1| putative GcrA-like regulator [Bradyrhizobium sp. ORS 278] emb|CAL77991.1| conserved hypothetical protein; putative GcrA-like regulator [Bradyrhizobium sp. ORS 278] Length = 159 Score = 153 bits (387), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 82/155 (52%), Positives = 101/155 (65%), Gaps = 16/155 (10%) Query: 5 QETWTPERVDQLKIYFEAGLSCRDIAVNIGVSRNAVIGKLSRLNLTRTTP-DERRARRKK 63 Q TWT ER+ LK +FEAGL+CR+IA +GVSRNAVIGK+SRL LTR D RR R + Sbjct: 8 QPTWTEERLRALKQHFEAGLTCREIAAELGVSRNAVIGKISRLALTRDNGGDSRRVVRAE 67 Query: 64 FAAHAAQRATAKQQLGLLQAVYEQPCDD----------APIVSANNCSLFELSEQRCRWP 113 A+R K + +L+AV P D P+ N CSLFELS++RCRWP Sbjct: 68 TTRDGARRPVPKLRRRILRAV---PNDPPPIVIEEPPAGPV--ENGCSLFELSKERCRWP 122 Query: 114 ISTPGADDFCFCGNTPLGGMPYCSGHYRLAYQAGS 148 ISTPGADDFCFCG+ P+ G+PYC H R+AY+ S Sbjct: 123 ISTPGADDFCFCGSKPIEGLPYCPSHTRMAYRVAS 157 >ref|YP_001208592.1| hypothetical protein BRADO6781 [Bradyrhizobium sp. ORS 278] emb|CAL80377.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 169 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 16/160 (10%) Query: 7 TWTPERVDQLKIYFEAGLSCRDIAVNIG-VSRNAVIGKLSRLNLT--RTTPDERRARRKK 63 TW+ +RV+QLK +EAGLS IA +G V+RNAVIGK+ RL L+ +P R++K Sbjct: 2 TWSDDRVEQLKKLWEAGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPATAAPRQRK 61 Query: 64 FAAHAAQ------RATAKQQLGLLQAVYEQPCDDAPIVSAN------NCSLFELSEQRCR 111 AA AQ R A+ L Q V+E + P+ N SL EL+E C Sbjct: 62 AAARPAQPMMRVARPVARGNTALAQ-VFEVEAEPDPVAFDNVVPMNQRLSLLELNEATCH 120 Query: 112 WPISTPGADDFCFCGNTPLGGMPYCSGHYRLAYQAGSRQR 151 WP+ P + DF FCG L G+PYC+ H R+AYQ + +R Sbjct: 121 WPVGDPSSPDFFFCGGKALAGLPYCAQHSRVAYQPAADRR 160 >ref|ZP_08628186.1| cell cycle regulator GcrA [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09095.1| cell cycle regulator GcrA [Bradyrhizobiaceae bacterium SG-6C] Length = 168 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 16/159 (10%) Query: 7 TWTPERVDQLKIYFEAGLSCRDIAVNIG-VSRNAVIGKLSRLNLT-------RTTPDERR 58 +WT +RV+QLK +EAGLS IA +G ++RNAVIGK+ RL L+ P +R+ Sbjct: 5 SWTDDRVEQLKKLWEAGLSASQIAAELGNITRNAVIGKVHRLGLSGRAKSPSSAAPRQRK 64 Query: 59 ARRKKFAAHAAQRATAKQQLGLLQAVYEQPCDDAPIVSAN------NCSLFELSEQRCRW 112 AR + + R ++ L A +E + P+ N +L EL+E C W Sbjct: 65 ARPAQHMMRIS-RPVSRGNTALAHA-FEVEAEPDPVAYDNVVPMSQRLTLLELNESTCHW 122 Query: 113 PISTPGADDFCFCGNTPLGGMPYCSGHYRLAYQAGSRQR 151 P+ PG+ DF FCG LGG+PYC+ H R+AYQ S +R Sbjct: 123 PVGDPGSADFFFCGGKALGGLPYCAHHSRVAYQPASDRR 161