BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0058.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206210.1| hypothetical protein BRADO4234 [Bradyrhizobi... 475 e-132 ref|YP_001240544.1| hypothetical protein BBta_4610 [Bradyrhizobi... 469 e-130 ref|NP_771619.1| hypothetical protein bll4979 [Bradyrhizobium ja... 467 e-130 ref|YP_486271.1| hypothetical protein RPB_2658 [Rhodopseudomonas... 461 e-128 ref|YP_569823.1| hypothetical protein RPD_2693 [Rhodopseudomonas... 456 e-126 >ref|YP_001206210.1| hypothetical protein BRADO4234 [Bradyrhizobium sp. ORS 278] emb|CAL77985.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 261 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 227/260 (87%), Positives = 241/260 (92%) Query: 26 MQQQTPPEQFDLGAIVADLNNLLRLKTTVIGIKMFARVEEMEAIPKIRRPSAVHTTDQIV 85 MQQ E+ DL AIVADLN LLRLKTTVIGIKMFARVE+MEA+ KIRRP+AVHTTDQIV Sbjct: 1 MQQTNASERLDLAAIVADLNALLRLKTTVIGIKMFARVEDMEAVEKIRRPNAVHTTDQIV 60 Query: 86 SMASRLGWTVGITGEDLVGAQCRAVIGLAPQDEKWLAGENYVGVWHGTAEDARKRQEALD 145 SMA+RLGWTVGITG+DLVGAQCRAVIGL PQD+ WL+G+ YVGVWHGTAEDARKRQEALD Sbjct: 61 SMAARLGWTVGITGDDLVGAQCRAVIGLGPQDDSWLSGQGYVGVWHGTAEDARKRQEALD 120 Query: 146 VVPYGQYQAMAVSPLTSGRLNPPDICLVYATPGQMIILINGLQYTGYKKFEWGVVGETAC 205 VVP+G+YQAMAVSPL SGRL+PPDICLVYATPGQMIILINGLQY GYKKFEWGVVGETAC Sbjct: 121 VVPFGRYQAMAVSPLASGRLDPPDICLVYATPGQMIILINGLQYVGYKKFEWGVVGETAC 180 Query: 206 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMALPPAYLVKAITGMKQLARNGLRYP 265 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMAL PA L KAI GMKQLA+NGLRYP Sbjct: 181 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMALKPADLAKAIAGMKQLAKNGLRYP 240 Query: 266 IAPYGIQADVRAGMGVSYKK 285 IAPYGIQ DVRAGM VSY+K Sbjct: 241 IAPYGIQNDVRAGMSVSYRK 260 >ref|YP_001240544.1| hypothetical protein BBta_4610 [Bradyrhizobium sp. BTAi1] gb|ABQ36638.1| hypothetical protein BBta_4610 [Bradyrhizobium sp. BTAi1] Length = 261 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 226/260 (86%), Positives = 239/260 (91%) Query: 26 MQQQTPPEQFDLGAIVADLNNLLRLKTTVIGIKMFARVEEMEAIPKIRRPSAVHTTDQIV 85 MQQ E+ DL A+VADLN LLRLKTTVIGIKMFARVE+M A+ KIRRP+AVHTTDQIV Sbjct: 1 MQQPNISERLDLAAMVADLNALLRLKTTVIGIKMFARVEDMAAVEKIRRPNAVHTTDQIV 60 Query: 86 SMASRLGWTVGITGEDLVGAQCRAVIGLAPQDEKWLAGENYVGVWHGTAEDARKRQEALD 145 SMA+RLGWTVGIT +DLVGAQCRAVIGL PQD+ WL GENYVGVWHGTAEDARKRQEALD Sbjct: 61 SMAARLGWTVGITADDLVGAQCRAVIGLGPQDDTWLKGENYVGVWHGTAEDARKRQEALD 120 Query: 146 VVPYGQYQAMAVSPLTSGRLNPPDICLVYATPGQMIILINGLQYTGYKKFEWGVVGETAC 205 VVP+G+YQAMAVSPL+SGRL+PPDICLVYATPGQMIILINGLQY GYKKFEWGVVGETAC Sbjct: 121 VVPFGRYQAMAVSPLSSGRLDPPDICLVYATPGQMIILINGLQYVGYKKFEWGVVGETAC 180 Query: 206 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMALPPAYLVKAITGMKQLARNGLRYP 265 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMAL PA L KAI GMKQLA+NGLRYP Sbjct: 181 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMALKPADLAKAIAGMKQLAKNGLRYP 240 Query: 266 IAPYGIQADVRAGMGVSYKK 285 IAPYGIQ DVRAGM VSY K Sbjct: 241 IAPYGIQNDVRAGMSVSYGK 260 >ref|NP_771619.1| hypothetical protein bll4979 [Bradyrhizobium japonicum USDA 110] dbj|BAC50244.1| bll4979 [Bradyrhizobium japonicum USDA 110] Length = 260 Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust. Identities = 220/260 (84%), Positives = 242/260 (93%), Gaps = 1/260 (0%) Query: 26 MQQQTPPEQFDLGAIVADLNNLLRLKTTVIGIKMFARVEEMEAIPKIRRPSAVHTTDQIV 85 MQQQ+ E D +VADLN+LLRLKTTVIG+K+FAR +MEAIPKIRRP+A+HTTDQ+V Sbjct: 1 MQQQSA-ENIDFAGLVADLNSLLRLKTTVIGMKLFARAADMEAIPKIRRPNAIHTTDQVV 59 Query: 86 SMASRLGWTVGITGEDLVGAQCRAVIGLAPQDEKWLAGENYVGVWHGTAEDARKRQEALD 145 SMA+RLGWTVGIT +DLVG+QCRAVIGL+PQD+KWLAGENYVGVWHGTAEDARKRQEALD Sbjct: 60 SMAARLGWTVGITADDLVGSQCRAVIGLSPQDDKWLAGENYVGVWHGTAEDARKRQEALD 119 Query: 146 VVPYGQYQAMAVSPLTSGRLNPPDICLVYATPGQMIILINGLQYTGYKKFEWGVVGETAC 205 VVP+G YQA+AVSPL SGRL+PPDICLVYATPGQMIILINGLQYTGYKKFEWGVVGETAC Sbjct: 120 VVPFGHYQALAVSPLASGRLDPPDICLVYATPGQMIILINGLQYTGYKKFEWGVVGETAC 179 Query: 206 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMALPPAYLVKAITGMKQLARNGLRYP 265 ADSWGRALKTGEPSLSLPC+AERRYGGVPDEEMLMAL P++L KAI GMK LA+NGLRYP Sbjct: 180 ADSWGRALKTGEPSLSLPCYAERRYGGVPDEEMLMALKPSHLAKAILGMKALAKNGLRYP 239 Query: 266 IAPYGIQADVRAGMGVSYKK 285 I PYGIQ+DVRAGMGVSY K Sbjct: 240 IPPYGIQSDVRAGMGVSYAK 259 >ref|YP_486271.1| hypothetical protein RPB_2658 [Rhodopseudomonas palustris HaA2] gb|ABD07360.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 261 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 222/260 (85%), Positives = 232/260 (89%) Query: 26 MQQQTPPEQFDLGAIVADLNNLLRLKTTVIGIKMFARVEEMEAIPKIRRPSAVHTTDQIV 85 M PE FD +VADLN LLRLKTTVIG+KMFA EMEAIPKIRRP+A+HTTDQIV Sbjct: 1 MDAAIAPETFDFAVMVADLNALLRLKTTVIGMKMFATAAEMEAIPKIRRPNAIHTTDQIV 60 Query: 86 SMASRLGWTVGITGEDLVGAQCRAVIGLAPQDEKWLAGENYVGVWHGTAEDARKRQEALD 145 MASRLGWTVGITG DLVGAQCRAVIGL PQDE+WL G +YVGVWH T EDARKRQ+ALD Sbjct: 61 GMASRLGWTVGITGNDLVGAQCRAVIGLGPQDEQWLDGRSYVGVWHATPEDARKRQQALD 120 Query: 146 VVPYGQYQAMAVSPLTSGRLNPPDICLVYATPGQMIILINGLQYTGYKKFEWGVVGETAC 205 VVP+GQYQAMAVSPL SGRL+PPDICLVYATPGQMIILINGLQY GYKKFEWGVVGETAC Sbjct: 121 VVPFGQYQAMAVSPLASGRLDPPDICLVYATPGQMIILINGLQYAGYKKFEWGVVGETAC 180 Query: 206 ADSWGRALKTGEPSLSLPCFAERRYGGVPDEEMLMALPPAYLVKAITGMKQLARNGLRYP 265 ADSWGRAL TGEPSLSLPCFAERRYGGVPDEEMLMAL PA L KAI GMKQLA+NGLRYP Sbjct: 181 ADSWGRALLTGEPSLSLPCFAERRYGGVPDEEMLMALKPAQLAKAIDGMKQLAKNGLRYP 240 Query: 266 IAPYGIQADVRAGMGVSYKK 285 IAPYGIQADVRAGMGVSY K Sbjct: 241 IAPYGIQADVRAGMGVSYGK 260 >ref|YP_569823.1| hypothetical protein RPD_2693 [Rhodopseudomonas palustris BisB5] gb|ABE39922.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 263 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 219/251 (87%), Positives = 231/251 (92%), Gaps = 1/251 (0%) Query: 33 EQFDLGAIVADLNNLLRLKTTVIGIKMFARVEEMEAIPKIRRPSAVHTTDQIVSMASRLG 92 E FD IVADLN LLRLKTTVIG+KMFA EMEAIPKIRRP+A+HTTDQIVSMASRLG Sbjct: 11 ETFDFATIVADLNTLLRLKTTVIGMKMFATAAEMEAIPKIRRPNAIHTTDQIVSMASRLG 70 Query: 93 WTVGITGEDLVGAQCRAVIGLAPQDEKWLAGENYVGVWHGTAEDARKRQEALDVVPYGQY 152 WTVGITG+DLVGAQCRAVIGL PQDE+WLAG +YVGVWH T +DA KRQ AL VVP+G+Y Sbjct: 71 WTVGITGDDLVGAQCRAVIGLGPQDEQWLAGRSYVGVWHATKDDASKRQHALSVVPFGKY 130 Query: 153 QAMAVSPLTSGRLNPPDICLVYATPGQMIILINGLQYTGYKKFEWGVVGETACADSWGRA 212 QAMAVSPL SGRLNP DICLVYATPGQMIILINGLQY+GYKKFEWGVVGETACADSWGRA Sbjct: 131 QAMAVSPLASGRLNP-DICLVYATPGQMIILINGLQYSGYKKFEWGVVGETACADSWGRA 189 Query: 213 LKTGEPSLSLPCFAERRYGGVPDEEMLMALPPAYLVKAITGMKQLARNGLRYPIAPYGIQ 272 L TGEPSLSLPCFAERRYGGVPDEEMLMAL PA+LVKAI GMKQLA+NGLRYPIAPYGIQ Sbjct: 190 LLTGEPSLSLPCFAERRYGGVPDEEMLMALQPAHLVKAIDGMKQLAKNGLRYPIAPYGIQ 249 Query: 273 ADVRAGMGVSY 283 ADVRAGMGVSY Sbjct: 250 ADVRAGMGVSY 260