BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0057.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771618.1| hypothetical protein bll4978 [Bradyrhizobium ja... 719 0.0 ref|YP_001206209.1| putative saccharopine dehydrogenase family p... 653 0.0 ref|YP_001240543.1| hypothetical protein BBta_4609 [Bradyrhizobi... 644 0.0 ref|ZP_01047221.1| saccharopine dehydrogenase [Nitrobacter sp. N... 571 e-161 ref|YP_577718.1| saccharopine dehydrogenase [Nitrobacter hamburg... 566 e-159 >ref|NP_771618.1| hypothetical protein bll4978 [Bradyrhizobium japonicum USDA 110] dbj|BAC50243.1| bll4978 [Bradyrhizobium japonicum USDA 110] Length = 392 Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/391 (88%), Positives = 368/391 (94%), Gaps = 1/391 (0%) Query: 1 MSTSKLDIVVYGATGFTGQLVAEYLAAHYRDG-SLKWAMAGRSKDKLASVRDAIGAPADT 59 MS++K DIVVYGATGFTGQLVAEYLAAHY+D +LKWAMAGRS DKL SVR+AIGAPADT Sbjct: 1 MSSAKFDIVVYGATGFTGQLVAEYLAAHYKDDKALKWAMAGRSLDKLKSVREAIGAPADT 60 Query: 60 PLIVADAGDAASLKVMLAQTKSVISTVGPYQLYGNELIAACVESGTDYFDLCGEPVWMRQ 119 PLIVADA DAASLK M+AQTKSVI+TVGPYQ+YG EL+AACV GTDYFDLCGEPVWMRQ Sbjct: 61 PLIVADASDAASLKAMVAQTKSVITTVGPYQIYGEELLAACVAGGTDYFDLCGEPVWMRQ 120 Query: 120 MIDKYEAAAKASGARIVFSCGFDSVPFELGAFFVQEEARRVFGAPAQRVKGRVRDMRGTL 179 MIDKYEAAAKASGARIVFSCG+DSVPFELG FFVQEEA+RVFGA A RVKGRVRDMRGTL Sbjct: 121 MIDKYEAAAKASGARIVFSCGYDSVPFELGTFFVQEEAKRVFGAAAARVKGRVRDMRGTL 180 Query: 180 SGGTAASAKATFDAVAKDLSLVAILNNPFALTPGFEGPKQPRGSKPAFEEDLHSWTAPFM 239 SGGTAASAKATFDAVAKDLSLVAILN+ FALTPGF GPKQP+G+K AFEEDL SW APFM Sbjct: 181 SGGTAASAKATFDAVAKDLSLVAILNDHFALTPGFAGPKQPKGNKAAFEEDLQSWAAPFM 240 Query: 240 MALINTRNVHRSNMLMGFPYGKDFVYDEMVLTGPGEKGEANAKRVMALNAEKTGPSAPKP 299 MALINTRNVHRSNMLMGFPYG++FVYDEMVLTGPGEKGEANAKRVMA+NAEKTGP APKP Sbjct: 241 MALINTRNVHRSNMLMGFPYGQEFVYDEMVLTGPGEKGEANAKRVMAVNAEKTGPKAPKP 300 Query: 300 GEGPSKEERENGRYDLLYLAVAPDGRMVRAGVKGDRDPGYGSTSKMISECAICLLRDTPD 359 GEGPSKEERENG ++LLY+A+APDGRMVRAGV GDRDPGYGSTSKMISECAIC+LRDTPD Sbjct: 301 GEGPSKEERENGLFNLLYVAIAPDGRMVRAGVTGDRDPGYGSTSKMISECAICMLRDTPD 360 Query: 360 VAPGFWTPGAAMQHKLIKRLVDHAGLTFEVE 390 VA GFWTPGAAMQH+LIKRL DHAGLTFEVE Sbjct: 361 VAAGFWTPGAAMQHRLIKRLQDHAGLTFEVE 391 >ref|YP_001206209.1| putative saccharopine dehydrogenase family protein [Bradyrhizobium sp. ORS 278] emb|CAL77984.1| conserved hypothetical protein; putative Saccharopine dehydrogenase family protein [Bradyrhizobium sp. ORS 278] Length = 392 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/391 (79%), Positives = 349/391 (89%), Gaps = 1/391 (0%) Query: 1 MSTSKLDIVVYGATGFTGQLVAEYLAAHYR-DGSLKWAMAGRSKDKLASVRDAIGAPADT 59 M++SK D+VVYGATGFTG+LVAEYLA YR DGSL+WAMAGRS DKLA+VRD IGAPADT Sbjct: 1 MTSSKFDLVVYGATGFTGKLVAEYLATQYRHDGSLRWAMAGRSLDKLAAVRDEIGAPADT 60 Query: 60 PLIVADAGDAASLKVMLAQTKSVISTVGPYQLYGNELIAACVESGTDYFDLCGEPVWMRQ 119 PLI ADA + ASLK M+AQT+ V++TVGPYQLYGNEL+A C E+GTDY DLCGEPVWMRQ Sbjct: 61 PLIAADASNPASLKAMVAQTRLVLTTVGPYQLYGNELVALCAETGTDYVDLCGEPVWMRQ 120 Query: 120 MIDKYEAAAKASGARIVFSCGFDSVPFELGAFFVQEEARRVFGAPAQRVKGRVRDMRGTL 179 MIDK++A A+ SGARIVFSCGFDSVPFELG +FVQ++A++V GAPA RVKGRVR M GTL Sbjct: 121 MIDKHQATAEQSGARIVFSCGFDSVPFELGVYFVQQQAKKVLGAPAARVKGRVRGMSGTL 180 Query: 180 SGGTAASAKATFDAVAKDLSLVAILNNPFALTPGFEGPKQPRGSKPAFEEDLHSWTAPFM 239 SGGTAASAKATFDAVA+DLSLVAIL + FALTPGF+GPKQP G+KP +EEDL SW APFM Sbjct: 181 SGGTAASAKATFDAVAQDLSLVAILKDFFALTPGFKGPKQPAGNKPVYEEDLQSWAAPFM 240 Query: 240 MALINTRNVHRSNMLMGFPYGKDFVYDEMVLTGPGEKGEANAKRVMALNAEKTGPSAPKP 299 MALINTRNVHRSNMLMGFPYG+DFVYDEMVLTG GEKGEANAK+VMA NAEKTGP+APKP Sbjct: 241 MALINTRNVHRSNMLMGFPYGQDFVYDEMVLTGAGEKGEANAKKVMAANAEKTGPNAPKP 300 Query: 300 GEGPSKEERENGRYDLLYLAVAPDGRMVRAGVKGDRDPGYGSTSKMISECAICLLRDTPD 359 GEGPSKEER+NG Y++L++A+ PDGR VRA VKGDRDPGYGSTSKMISECAI LLRD Sbjct: 301 GEGPSKEERDNGYYNILFVAIGPDGRQVRATVKGDRDPGYGSTSKMISECAIGLLRDGAS 360 Query: 360 VAPGFWTPGAAMQHKLIKRLVDHAGLTFEVE 390 V GFWTPGAA+Q LIKRLVD+AGLTF VE Sbjct: 361 VKGGFWTPGAALQDSLIKRLVDNAGLTFTVE 391 >ref|YP_001240543.1| hypothetical protein BBta_4609 [Bradyrhizobium sp. BTAi1] gb|ABQ36637.1| hypothetical protein BBta_4609 [Bradyrhizobium sp. BTAi1] Length = 392 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/391 (79%), Positives = 345/391 (88%), Gaps = 1/391 (0%) Query: 1 MSTSKLDIVVYGATGFTGQLVAEYLAAHYR-DGSLKWAMAGRSKDKLASVRDAIGAPADT 59 M++ K D++VYGATGFTG+LVAEYL YR D SL WAMAGRS DKLA+VRD IGAPADT Sbjct: 1 MTSPKFDLIVYGATGFTGKLVAEYLTTQYRGDASLCWAMAGRSLDKLAAVRDEIGAPADT 60 Query: 60 PLIVADAGDAASLKVMLAQTKSVISTVGPYQLYGNELIAACVESGTDYFDLCGEPVWMRQ 119 PLI ADA D ASL M+AQTK V++TVGPYQ YGNEL+AACV++GTDY DLCGEPVWMRQ Sbjct: 61 PLIAADASDPASLAAMVAQTKLVLTTVGPYQFYGNELVAACVDTGTDYVDLCGEPVWMRQ 120 Query: 120 MIDKYEAAAKASGARIVFSCGFDSVPFELGAFFVQEEARRVFGAPAQRVKGRVRDMRGTL 179 MIDK++AAA+ SGARI+FSCGFDSVPFELG +FVQ++A++V GA A RVKGRVR M GTL Sbjct: 121 MIDKHQAAAEKSGARIMFSCGFDSVPFELGVYFVQQQAKKVLGATAARVKGRVRGMSGTL 180 Query: 180 SGGTAASAKATFDAVAKDLSLVAILNNPFALTPGFEGPKQPRGSKPAFEEDLHSWTAPFM 239 SGGTAASAKATFDAVAKDLSLV+IL + FALT GF+GPKQP G+KP +EEDL SWTAPFM Sbjct: 181 SGGTAASAKATFDAVAKDLSLVSILKDAFALTLGFKGPKQPAGNKPLYEEDLQSWTAPFM 240 Query: 240 MALINTRNVHRSNMLMGFPYGKDFVYDEMVLTGPGEKGEANAKRVMALNAEKTGPSAPKP 299 MALINTRNVHRSNMLMGFPYG+DFVYDEMVLTGPGEKGEANAK+VMA NAEKTGP+APKP Sbjct: 241 MALINTRNVHRSNMLMGFPYGQDFVYDEMVLTGPGEKGEANAKKVMAANAEKTGPNAPKP 300 Query: 300 GEGPSKEERENGRYDLLYLAVAPDGRMVRAGVKGDRDPGYGSTSKMISECAICLLRDTPD 359 GEGPSKEERE G Y+LL++A+A DGR VRA VKGDRDPGYGSTSKMISECAI LLRD + Sbjct: 301 GEGPSKEEREKGYYNLLFVAIAADGRQVRATVKGDRDPGYGSTSKMISECAIGLLRDGAN 360 Query: 360 VAPGFWTPGAAMQHKLIKRLVDHAGLTFEVE 390 V GFWTPGAA+ LIKRLVDHAGLTF VE Sbjct: 361 VKGGFWTPGAALGDSLIKRLVDHAGLTFTVE 391 >ref|ZP_01047221.1| saccharopine dehydrogenase [Nitrobacter sp. Nb-311A] gb|EAQ34803.1| saccharopine dehydrogenase [Nitrobacter sp. Nb-311A] Length = 393 Score = 571 bits (1471), Expect = e-161, Method: Compositional matrix adjust. Identities = 272/389 (69%), Positives = 317/389 (81%) Query: 2 STSKLDIVVYGATGFTGQLVAEYLAAHYRDGSLKWAMAGRSKDKLASVRDAIGAPADTPL 61 S+++ DI+VYGA+GFTG+LVAEYLAA Y DG LKWA+AGR DKLA+VR+AIGAP D PL Sbjct: 4 SSTEFDIIVYGASGFTGRLVAEYLAAEYSDGDLKWAIAGRDLDKLAAVREAIGAPRDLPL 63 Query: 62 IVADAGDAASLKVMLAQTKSVISTVGPYQLYGNELIAACVESGTDYFDLCGEPVWMRQMI 121 I AD+ +AASL+ M +T SV+STVGPYQLYG+ L+AAC SGTDY DLCGEP+WMRQMI Sbjct: 64 IAADSDNAASLRTMADRTASVLSTVGPYQLYGSGLVAACAASGTDYLDLCGEPLWMRQMI 123 Query: 122 DKYEAAAKASGARIVFSCGFDSVPFELGAFFVQEEARRVFGAPAQRVKGRVRDMRGTLSG 181 D +EA A+ SGARIVFSCG+DS+PFELG FF+QE A++ FGA RVKGRVR M+GT SG Sbjct: 124 DAHEAEARRSGARIVFSCGYDSLPFELGVFFLQEAAKQRFGATVSRVKGRVRKMKGTFSG 183 Query: 182 GTAASAKATFDAVAKDLSLVAILNNPFALTPGFEGPKQPRGSKPAFEEDLHSWTAPFMMA 241 GTAAS KA F A A D SL+ L + F LTPGFEGPKQP G+KP F+EDL W APF+MA Sbjct: 184 GTAASMKAIFAAAANDPSLLPKLRDSFVLTPGFEGPKQPPGNKPLFDEDLGMWVAPFVMA 243 Query: 242 LINTRNVHRSNMLMGFPYGKDFVYDEMVLTGPGEKGEANAKRVMALNAEKTGPSAPKPGE 301 INTRNVHRSN L+GFPYGKDFVYDEMV+ GP E GEA AK ++A N + PKPGE Sbjct: 244 NINTRNVHRSNFLLGFPYGKDFVYDEMVVAGPKETGEATAKAIIAANNKLGAQGGPKPGE 303 Query: 302 GPSKEERENGRYDLLYLAVAPDGRMVRAGVKGDRDPGYGSTSKMISECAICLLRDTPDVA 361 GPSKEERE+G YDL++L + PDGR ++A V GDRDPGYGSTSKMI+ECAICL RD PD+A Sbjct: 304 GPSKEERESGHYDLVFLGIGPDGRQLKAVVTGDRDPGYGSTSKMIAECAICLRRDAPDLA 363 Query: 362 PGFWTPGAAMQHKLIKRLVDHAGLTFEVE 390 GFWTPGAAM+ LIKRLVDHAGLTF +E Sbjct: 364 GGFWTPGAAMKDALIKRLVDHAGLTFAIE 392 >ref|YP_577718.1| saccharopine dehydrogenase [Nitrobacter hamburgensis X14] gb|ABE63258.1| Saccharopine dehydrogenase [Nitrobacter hamburgensis X14] Length = 392 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 271/389 (69%), Positives = 314/389 (80%) Query: 2 STSKLDIVVYGATGFTGQLVAEYLAAHYRDGSLKWAMAGRSKDKLASVRDAIGAPADTPL 61 S+++ DIVVYGA+GFTG+LVAEY AA YR LKWA+AGRS DKLASVRDAIGAP D PL Sbjct: 3 SSAEFDIVVYGASGFTGRLVAEYFAAEYRGSDLKWAIAGRSLDKLASVRDAIGAPGDFPL 62 Query: 62 IVADAGDAASLKVMLAQTKSVISTVGPYQLYGNELIAACVESGTDYFDLCGEPVWMRQMI 121 I AD+GD ASLK M+ +T SV+STVGPYQLYG+ L+AAC GTDY DLCGEP+WMRQMI Sbjct: 63 IAADSGDPASLKAMVGRTASVLSTVGPYQLYGSGLVAACAAGGTDYLDLCGEPIWMRQMI 122 Query: 122 DKYEAAAKASGARIVFSCGFDSVPFELGAFFVQEEARRVFGAPAQRVKGRVRDMRGTLSG 181 D +EA A+ SGARIVFSCG+DS+PFELG FF+QE A++ G+ RVKGRVR M+GT SG Sbjct: 123 DAHEAEARRSGARIVFSCGYDSLPFELGVFFLQEAAKQQLGSSVARVKGRVRKMKGTFSG 182 Query: 182 GTAASAKATFDAVAKDLSLVAILNNPFALTPGFEGPKQPRGSKPAFEEDLHSWTAPFMMA 241 GTAAS KA F A A D SL+ L +PF LTPGFEGPKQP G+KP F+ED+ W APF+MA Sbjct: 183 GTAASMKAIFAAAANDPSLLPKLRDPFVLTPGFEGPKQPPGNKPLFDEDIGMWLAPFVMA 242 Query: 242 LINTRNVHRSNMLMGFPYGKDFVYDEMVLTGPGEKGEANAKRVMALNAEKTGPSAPKPGE 301 INTRNVHRSN L+GFPYG+ FVYDEM++ GP GEA AK ++A N + PKPGE Sbjct: 243 NINTRNVHRSNFLLGFPYGRGFVYDEMMVAGPKVTGEATAKAIIAANNKLGAQGGPKPGE 302 Query: 302 GPSKEERENGRYDLLYLAVAPDGRMVRAGVKGDRDPGYGSTSKMISECAICLLRDTPDVA 361 GPSKEERE+G YDLL++ +APDGR V+A V GDRDPGYGSTSKMI+ECAICL RDTPDV Sbjct: 303 GPSKEERESGYYDLLFVGIAPDGRRVKAVVTGDRDPGYGSTSKMIAECAICLRRDTPDVT 362 Query: 362 PGFWTPGAAMQHKLIKRLVDHAGLTFEVE 390 GFWTPGAAM+ LIKRLVD AGLTF +E Sbjct: 363 GGFWTPGAAMKDALIKRLVDRAGLTFTIE 391