BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0195.0055.p         (174 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771616.1| transcriptional regulator [Bradyrhizobium japon...   245   2e-63
ref|ZP_07899988.1| transcriptional regulator, MarR family protei...   122   2e-26
ref|YP_003954878.1| MarR family transcriptional regulator [Stigm...   120   7e-26
ref|ZP_08509412.1| transcriptional regulator, MarR family [Paeni...   120   9e-26
dbj|BAJ52669.1| putative transcriptional regulator [Streptomyces...   118   4e-25

>ref|NP_771616.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50241.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 179

 Score =  245 bits (625), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/174 (75%), Positives = 155/174 (89%), Gaps = 1/174 (0%)

Query: 1   LSSAKSRAALMQELEEAMRRSSAQGVMYGQAVANMAGISNSDMECMDILHLEGRVTAGRL 60
           LS  K+RAAL+QELEEAMRRSSAQGV+YGQ VAN+AGI+NSD+ECMDIL+LEGRVTAGRL
Sbjct: 5   LSRTKARAALLQELEEAMRRSSAQGVLYGQTVANVAGIANSDLECMDILYLEGRVTAGRL 64

Query: 61  AEVTGLTTGAITGVVDRLEKAGYVRRERDESDRRKVFISVVEEKAAEIGKFYVPMQEAML 120
           AEVTGLTTGAITGV+DRLEKAG VRRERDE DRRKVFI+VV E A +IG+FYVPMQ+AM 
Sbjct: 65  AEVTGLTTGAITGVIDRLEKAGLVRRERDEKDRRKVFIAVVPEAAMKIGQFYVPMQQAME 124

Query: 121 KLWSSYTDDELRLLLRFANDGYKGVLEATGALKAVIDMPPEQRASLKMPPKARR 174
           K++ +Y+D+ELRLLLRFA +GYKGVL AT ALK+++D PPE+R  LK+  K RR
Sbjct: 125 KVFGAYSDEELRLLLRFATEGYKGVLAATEALKSLLDTPPEKRPDLKL-KKLRR 177


>ref|ZP_07899988.1| transcriptional regulator, MarR family protein [Paenibacillus
           vortex V453]
 gb|EFU41127.1| transcriptional regulator, MarR family protein [Paenibacillus
           vortex V453]
          Length = 164

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 88/128 (68%)

Query: 10  LMQELEEAMRRSSAQGVMYGQAVANMAGISNSDMECMDILHLEGRVTAGRLAEVTGLTTG 69
           L + L   MRR   + V+Y Q VA+  G+ N+D   +DILH +G +TAG L+++TGLTTG
Sbjct: 12  LQENLTLRMRRLGTRTVLYQQQVASSLGLYNNDFISIDILHEKGPITAGELSKLTGLTTG 71

Query: 70  AITGVVDRLEKAGYVRRERDESDRRKVFISVVEEKAAEIGKFYVPMQEAMLKLWSSYTDD 129
           ++T ++DRLEK+GYVRRE D  DRRKV I  + E   ++ + Y+ +  +M+ L SSYT++
Sbjct: 72  SVTALIDRLEKSGYVRRENDPKDRRKVIIVPLYEDKEDVSETYLKLYASMMDLASSYTEE 131

Query: 130 ELRLLLRF 137
           EL L+ +F
Sbjct: 132 ELDLITQF 139


>ref|YP_003954878.1| MarR family transcriptional regulator [Stigmatella aurantiaca
           DW4/3-1]
 gb|ADO73051.1| Transcriptional regulatory protein, MarR family [Stigmatella
           aurantiaca DW4/3-1]
          Length = 359

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 100/156 (64%)

Query: 2   SSAKSRAALMQELEEAMRRSSAQGVMYGQAVANMAGISNSDMECMDILHLEGRVTAGRLA 61
           S  K R  L++ L   +R  S Q V++ QA A+  G++ +D++C+ IL   G +TAG+LA
Sbjct: 3   SRWKGREELLEALSRGIRDFSDQDVLFSQASADRLGLNLTDLKCLSILERTGAMTAGKLA 62

Query: 62  EVTGLTTGAITGVVDRLEKAGYVRRERDESDRRKVFISVVEEKAAEIGKFYVPMQEAMLK 121
           EVTGLT+GA+TG++DRLEKAG+ RR R+  DRR V I  V E+ A+I + +   + A+  
Sbjct: 63  EVTGLTSGAVTGLIDRLEKAGWARRVRNPKDRRHVIIEAVAERGADIDRLFSESRSALAD 122

Query: 122 LWSSYTDDELRLLLRFANDGYKGVLEATGALKAVID 157
           + S YT++++ L+L F +     + + T  L+AV +
Sbjct: 123 IVSDYTEEQIGLVLDFLDRSSAMLRDETVKLRAVTE 158


>ref|ZP_08509412.1| transcriptional regulator, MarR family [Paenibacillus sp. HGF7]
 gb|EGL17881.1| transcriptional regulator, MarR family [Paenibacillus sp. HGF7]
          Length = 164

 Score =  120 bits (300), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 82/120 (68%)

Query: 18  MRRSSAQGVMYGQAVANMAGISNSDMECMDILHLEGRVTAGRLAEVTGLTTGAITGVVDR 77
           MR    + V+Y Q VA   G+ N+D   +DILH +G +TAG L+++TGL TG++T ++DR
Sbjct: 20  MRGLGTRTVLYQQNVAARLGLYNNDFLSIDILHEKGPITAGELSKLTGLATGSVTALIDR 79

Query: 78  LEKAGYVRRERDESDRRKVFISVVEEKAAEIGKFYVPMQEAMLKLWSSYTDDELRLLLRF 137
           LEK G+VRR+ D +DRRKV I  + E   E+   Y+P+ +AM+ L +SYTD+EL  + RF
Sbjct: 80  LEKNGFVRRQMDPNDRRKVIIVPLYEDKEEVSSTYLPLHDAMVNLAASYTDEELEFINRF 139


>dbj|BAJ52669.1| putative transcriptional regulator [Streptomyces sp. TA-0256]
          Length = 167

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 88/134 (65%)

Query: 6   SRAALMQELEEAMRRSSAQGVMYGQAVANMAGISNSDMECMDILHLEGRVTAGRLAEVTG 65
           SR  L+  L   MRR S + V++ QA+A+  GI+ +D++C+D+      VTAGRLAEV+G
Sbjct: 7   SRDDLIGALSWKMRRLSGETVLFHQAIADRLGINPTDLKCLDLASGPEPVTAGRLAEVSG 66

Query: 66  LTTGAITGVVDRLEKAGYVRRERDESDRRKVFISVVEEKAAEIGKFYVPMQEAMLKLWSS 125
           LT+GAITGV++RLEKAG V R+ D  DRRKV I+V  +    +   +  M  +ML+L S 
Sbjct: 67  LTSGAITGVINRLEKAGLVERQPDPDDRRKVIIAVRPDVPMTVMGLFGSMSHSMLELCSR 126

Query: 126 YTDDELRLLLRFAN 139
           Y + EL L+L F +
Sbjct: 127 YEEHELALVLDFVS 140