BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0054.p (422 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771615.1| hypothetical protein blr4975 [Bradyrhizobium ja... 639 0.0 ref|YP_001206208.1| hypothetical protein BRADO4232 [Bradyrhizobi... 598 e-169 ref|ZP_01047220.1| hypothetical protein NB311A_19567 [Nitrobacte... 587 e-165 ref|YP_318024.1| hypothetical protein Nwi_1411 [Nitrobacter wino... 570 e-160 ref|YP_001240542.1| hypothetical protein BBta_4608 [Bradyrhizobi... 563 e-158 >ref|NP_771615.1| hypothetical protein blr4975 [Bradyrhizobium japonicum USDA 110] dbj|BAC50240.1| blr4975 [Bradyrhizobium japonicum USDA 110] Length = 419 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/421 (76%), Positives = 364/421 (86%), Gaps = 3/421 (0%) Query: 1 MAYAATAGTSQSPTSAPAGVLALQRALVWLAGASGAIVFIEPSPYELVTLTACVLFFGTG 60 MAYAATAG + A GVLALQRALVWL GASGAIVFIEPSPYE+VTL A V FF TG Sbjct: 2 MAYAATAGEMNAAVRAAPGVLALQRALVWLVGASGAIVFIEPSPYEIVTLLATVTFFATG 61 Query: 61 LRMRLVFMPLLFTLIVLNVGYSIGAVPFLDKPEVVNWVLTSWYMAVTVIFFAMVMSEDTE 120 LR+RL MPLL L++LNVGY+I A+P D+PEVV+W+ TSWYMAVTV+FFA + SEDT Sbjct: 62 LRLRLALMPLLLMLVLLNVGYTISAIPLFDQPEVVSWIATSWYMAVTVVFFATITSEDTA 121 Query: 121 ARLDMLRRGLIVGAMIASLAGIAGYFRLVPGGYDLLTLYDRARGTFKDPNVLGAFLILPA 180 ARLDMLRRGL+VGAMIASL+ +AGYF L+PGG DLLTLY RARGTFKDPNVLGAFLILPA Sbjct: 122 ARLDMLRRGLVVGAMIASLSAVAGYFHLIPGGDDLLTLYGRARGTFKDPNVLGAFLILPA 181 Query: 181 LFTLQSVVSDPFGKALRNAIAFGIISLAILLSFSRAAWGGLVITAAFMLALMVFTSRSQA 240 LF LQSVVSD KA RN IAFGI+SLAILL+FSRAAWGGLV+T+AFMLALMV TSR+ A Sbjct: 182 LFALQSVVSDKLAKAFRNVIAFGIMSLAILLAFSRAAWGGLVLTSAFMLALMVLTSRTNA 241 Query: 241 QRSRIIVMTLIAAILAVALIAVLLSIGSVADMFKQRASFDQSYDEGRFGRFGRHILGAQM 300 QRSRI+VM ++AA+L VALIAVLLS S A+MFKQRASFDQSYDEGRFGRFGRHILGA+M Sbjct: 242 QRSRIVVMAIVAAVLGVALIAVLLSFDSTAEMFKQRASFDQSYDEGRFGRFGRHILGAEM 301 Query: 301 ALELPFGIGPLQFHTYFPEDTHNSFLNAFMSGGWISGICYPALVFVSAIIGFRYVYLQVP 360 AL+LPFGIGPLQFH +FPEDTHNS+LNAFMSGGW+SG+CYPALVF + I GFR+++++VP Sbjct: 302 ALDLPFGIGPLQFHRFFPEDTHNSYLNAFMSGGWLSGVCYPALVFTTVITGFRHIFVRVP 361 Query: 361 WQRGYLAVFSAFLGVVGESFIIDTDHWRHFWMMLGTMWGMYAAAERYRATSARIIDEPSA 420 WQR YLAVFSAF+G VGESF+IDTDHWRHFWMMLG MWGM AAA+ Y+ R DE S+ Sbjct: 362 WQRAYLAVFSAFVGTVGESFVIDTDHWRHFWMMLGAMWGMIAAAQVYK---TRAGDEASS 418 Query: 421 A 421 A Sbjct: 419 A 419 >ref|YP_001206208.1| hypothetical protein BRADO4232 [Bradyrhizobium sp. ORS 278] emb|CAL77983.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 423 Score = 598 bits (1541), Expect = e-169, Method: Compositional matrix adjust. Identities = 292/413 (70%), Positives = 343/413 (83%) Query: 1 MAYAATAGTSQSPTSAPAGVLALQRALVWLAGASGAIVFIEPSPYELVTLTACVLFFGTG 60 MAY A AG S AP GV+ LQRALVWL GA+GAIVFIEPSPYELVTL + +F TG Sbjct: 1 MAYTAAAGEFASRPIAPPGVIGLQRALVWLIGAAGAIVFIEPSPYELVTLASAAVFVATG 60 Query: 61 LRMRLVFMPLLFTLIVLNVGYSIGAVPFLDKPEVVNWVLTSWYMAVTVIFFAMVMSEDTE 120 +R+R VF+ LL L ++N+GY++ AVP LD ++ +W+ TSWYMAVT + AMV +EDT Sbjct: 61 IRLRAVFLFLLLLLFLINLGYTVSAVPLLDDSKIASWIATSWYMAVTALLLAMVTAEDTA 120 Query: 121 ARLDMLRRGLIVGAMIASLAGIAGYFRLVPGGYDLLTLYDRARGTFKDPNVLGAFLILPA 180 ARLDMLRRGL++G +A LAGIAGYF LVPGG DLLTLY RARGTFKDPNVLGAFLILPA Sbjct: 121 ARLDMLRRGLVMGGAMAGLAGIAGYFHLVPGGTDLLTLYGRARGTFKDPNVLGAFLILPA 180 Query: 181 LFTLQSVVSDPFGKALRNAIAFGIISLAILLSFSRAAWGGLVITAAFMLALMVFTSRSQA 240 L LQ+VV+ +R + A GI++LAILL+FSRAAWGGLV+TAAFML LMV TS+++ Sbjct: 181 LLALQNVVTARLAATMRASFALGIMALAILLAFSRAAWGGLVLTAAFMLVLMVLTSQTRG 240 Query: 241 QRSRIIVMTLIAAILAVALIAVLLSIGSVADMFKQRASFDQSYDEGRFGRFGRHILGAQM 300 +RSRIIVMTL AA+ V LI +LLSI S+ADMFKQRASFDQSYDEGRFGRFGRHILGA M Sbjct: 241 ERSRIIVMTLAAAVAGVVLIGILLSIDSIADMFKQRASFDQSYDEGRFGRFGRHILGADM 300 Query: 301 ALELPFGIGPLQFHTYFPEDTHNSFLNAFMSGGWISGICYPALVFVSAIIGFRYVYLQVP 360 AL+LPFGIGPLQFH YFPEDTHNS+LNAFMSGGW+SGICYPALVF + I+GFRY++ +VP Sbjct: 301 ALDLPFGIGPLQFHNYFPEDTHNSYLNAFMSGGWLSGICYPALVFTTVILGFRYLFARVP 360 Query: 361 WQRGYLAVFSAFLGVVGESFIIDTDHWRHFWMMLGTMWGMYAAAERYRATSAR 413 WQR Y+AVFSAFLG VGESFIIDTDHWRHF++MLGTMWGM AA ++A ++R Sbjct: 361 WQRTYIAVFSAFLGTVGESFIIDTDHWRHFFLMLGTMWGMIAATRAHQAEASR 413 >ref|ZP_01047220.1| hypothetical protein NB311A_19567 [Nitrobacter sp. Nb-311A] gb|EAQ34802.1| hypothetical protein NB311A_19567 [Nitrobacter sp. Nb-311A] Length = 421 Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust. Identities = 284/419 (67%), Positives = 345/419 (82%) Query: 1 MAYAATAGTSQSPTSAPAGVLALQRALVWLAGASGAIVFIEPSPYELVTLTACVLFFGTG 60 MAY A + P++ G+ ALQRAL+W G GAIV+IEPSPYE TL A V+FF TG Sbjct: 1 MAYPAAVDSWFRPSTQAPGIAALQRALLWAVGVGGAIVYIEPSPYEFATLAAIVVFFATG 60 Query: 61 LRMRLVFMPLLFTLIVLNVGYSIGAVPFLDKPEVVNWVLTSWYMAVTVIFFAMVMSEDTE 120 LRMRL F+PLL L ++N+GY+IGAV +DK ++VNWV+TSWYMAVTV+FFA+V SEDTE Sbjct: 61 LRMRLAFIPLLTLLFLINIGYTIGAVHLMDKSQIVNWVMTSWYMAVTVVFFALVFSEDTE 120 Query: 121 ARLDMLRRGLIVGAMIASLAGIAGYFRLVPGGYDLLTLYDRARGTFKDPNVLGAFLILPA 180 ARLD++RRGLIVGA+IAS+AG+AGYF LVPG +D+LTLY RARGTFKDPNVL AFLILPA Sbjct: 121 ARLDLMRRGLIVGAVIASVAGVAGYFHLVPGEHDVLTLYGRARGTFKDPNVLSAFLILPA 180 Query: 181 LFTLQSVVSDPFGKALRNAIAFGIISLAILLSFSRAAWGGLVITAAFMLALMVFTSRSQA 240 LF LQS+V+D FGKALR+AI GIISLA+LL+FSRAAWG V+T+AFML LM T+ S+ Sbjct: 181 LFVLQSIVTDRFGKALRSAIVLGIISLAVLLAFSRAAWGQFVLTSAFMLVLMFLTNPSRK 240 Query: 241 QRSRIIVMTLIAAILAVALIAVLLSIGSVADMFKQRASFDQSYDEGRFGRFGRHILGAQM 300 QRSR+++ IAA L+A+LLS+ SV +FK+RASFDQSYDEGRFGRFGRHILG QM Sbjct: 241 QRSRLVLTATIAACAIALLLAILLSLDSVDSLFKERASFDQSYDEGRFGRFGRHILGFQM 300 Query: 301 ALELPFGIGPLQFHTYFPEDTHNSFLNAFMSGGWISGICYPALVFVSAIIGFRYVYLQVP 360 AL+ P GIGPLQF +FPEDTHNS+LNAFMSGGWISGICYP L+F + I+GFRY++++VP Sbjct: 301 ALDQPLGIGPLQFTRFFPEDTHNSYLNAFMSGGWISGICYPVLIFTTVILGFRYIFVRVP 360 Query: 361 WQRGYLAVFSAFLGVVGESFIIDTDHWRHFWMMLGTMWGMYAAAERYRATSARIIDEPS 419 WQR YLA+F+AFLG VGESF+IDTDHWRHFW+MLG MWGM+AA +Y A + +P+ Sbjct: 361 WQRTYLAIFTAFLGTVGESFVIDTDHWRHFWLMLGMMWGMFAATHQYMADARHTSVQPA 419 >ref|YP_318024.1| hypothetical protein Nwi_1411 [Nitrobacter winogradskyi Nb-255] gb|ABA04672.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 420 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 286/419 (68%), Positives = 342/419 (81%) Query: 1 MAYAATAGTSQSPTSAPAGVLALQRALVWLAGASGAIVFIEPSPYELVTLTACVLFFGTG 60 MAY A + P++ G+ ALQRAL+W GA GAIV+IEPSPYE TL A V+FF TG Sbjct: 1 MAYPAAVDSWLRPSTQAPGIAALQRALLWAVGAGGAIVYIEPSPYEFATLAAIVVFFATG 60 Query: 61 LRMRLVFMPLLFTLIVLNVGYSIGAVPFLDKPEVVNWVLTSWYMAVTVIFFAMVMSEDTE 120 LRMRL F+PLL L ++N GY+IGAV +DK ++VNW++TSWYMAVTVIFFA+V SEDTE Sbjct: 61 LRMRLAFVPLLLLLFLINFGYTIGAVHLMDKTQIVNWIMTSWYMAVTVIFFALVFSEDTE 120 Query: 121 ARLDMLRRGLIVGAMIASLAGIAGYFRLVPGGYDLLTLYDRARGTFKDPNVLGAFLILPA 180 RLD++RRGLIVGA+IAS+AG+AGYF LVPG +D+LTLY RARGTFKDPNVL AFLILP Sbjct: 121 TRLDLMRRGLIVGAVIASVAGVAGYFHLVPGEHDVLTLYGRARGTFKDPNVLSAFLILPG 180 Query: 181 LFTLQSVVSDPFGKALRNAIAFGIISLAILLSFSRAAWGGLVITAAFMLALMVFTSRSQA 240 LF LQSVV+D FGKA R+A+A GIISLA+LL+FSRAAWG V+T+AF+L LM TS S Sbjct: 181 LFVLQSVVTDRFGKAFRSALALGIISLAVLLAFSRAAWGQFVLTSAFVLVLMFLTSPSGK 240 Query: 241 QRSRIIVMTLIAAILAVALIAVLLSIGSVADMFKQRASFDQSYDEGRFGRFGRHILGAQM 300 QRSR+++ +IAA L+AVLLS+ SV +FK+RASFDQSYD GRFGRFGRHILG QM Sbjct: 241 QRSRLVLTAVIAAAAIALLLAVLLSLDSVESLFKERASFDQSYDGGRFGRFGRHILGFQM 300 Query: 301 ALELPFGIGPLQFHTYFPEDTHNSFLNAFMSGGWISGICYPALVFVSAIIGFRYVYLQVP 360 ALE P GIGPLQF +FPEDTHNS+LNAFMSGGWISGI YP L+F + I+GFRY++++VP Sbjct: 301 ALEQPLGIGPLQFTRFFPEDTHNSYLNAFMSGGWISGISYPVLIFTTVILGFRYIFVRVP 360 Query: 361 WQRGYLAVFSAFLGVVGESFIIDTDHWRHFWMMLGTMWGMYAAAERYRATSARIIDEPS 419 WQR YLAVF+AFLG VGESF+IDTDHWRHFW+MLG MWGM+AA +YRA D+P+ Sbjct: 361 WQRTYLAVFAAFLGTVGESFVIDTDHWRHFWLMLGMMWGMFAATHQYRADLRHAPDQPA 419 >ref|YP_001240542.1| hypothetical protein BBta_4608 [Bradyrhizobium sp. BTAi1] gb|ABQ36636.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 423 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 289/402 (71%), Positives = 340/402 (84%) Query: 12 SPTSAPAGVLALQRALVWLAGASGAIVFIEPSPYELVTLTACVLFFGTGLRMRLVFMPLL 71 SPT P GV+ALQRALVWL GA+GAIVFIEPSPYEL TL + +F TG+R+RLVF+PLL Sbjct: 11 SPTITPPGVVALQRALVWLVGAAGAIVFIEPSPYELATLASAAVFIATGIRLRLVFLPLL 70 Query: 72 FTLIVLNVGYSIGAVPFLDKPEVVNWVLTSWYMAVTVIFFAMVMSEDTEARLDMLRRGLI 131 L ++N+GY+I A+P LD ++ +W+ TSWYMAVT + A+V S+DT ARLDMLRRGL+ Sbjct: 71 LLLFLINLGYTISAIPLLDDSKIASWIATSWYMAVTAMLLALVTSDDTGARLDMLRRGLV 130 Query: 132 VGAMIASLAGIAGYFRLVPGGYDLLTLYDRARGTFKDPNVLGAFLILPALFTLQSVVSDP 191 +G +A+LAG+AGYF LVPGGYDLLTLY RARGTFKDPNVLGAFLILPAL LQ+VV+ Sbjct: 131 MGGAVAALAGVAGYFHLVPGGYDLLTLYGRARGTFKDPNVLGAFLILPALLALQNVVTAR 190 Query: 192 FGKALRNAIAFGIISLAILLSFSRAAWGGLVITAAFMLALMVFTSRSQAQRSRIIVMTLI 251 LR A G+++LAILL+FSRAAWGGLV+T+AFMLALMV TS S +RSRIIVMTL Sbjct: 191 LAATLRAGFALGVMALAILLAFSRAAWGGLVLTSAFMLALMVLTSTSSRERSRIIVMTLA 250 Query: 252 AAILAVALIAVLLSIGSVADMFKQRASFDQSYDEGRFGRFGRHILGAQMALELPFGIGPL 311 AA++ + LIAVLLS+ SVADMFKQRASFDQSYD GRFGRFGRHILGA MAL+LPFGIGPL Sbjct: 251 AAVIGLMLIAVLLSLDSVADMFKQRASFDQSYDGGRFGRFGRHILGADMALDLPFGIGPL 310 Query: 312 QFHTYFPEDTHNSFLNAFMSGGWISGICYPALVFVSAIIGFRYVYLQVPWQRGYLAVFSA 371 QFH YFPEDTHNS+LNAFMSGGW+SGICYPALVF + +GFRY++++VPWQR Y+AVFSA Sbjct: 311 QFHNYFPEDTHNSYLNAFMSGGWLSGICYPALVFTTVFLGFRYLFVRVPWQRTYIAVFSA 370 Query: 372 FLGVVGESFIIDTDHWRHFWMMLGTMWGMYAAAERYRATSAR 413 FLG VGESFIIDTDHWRHF++MLGTMWGM AAA Y+ + R Sbjct: 371 FLGTVGESFIIDTDHWRHFFLMLGTMWGMIAAARTYQVETGR 412