BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0043.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771610.1| hypothetical protein bll4970 [Bradyrhizobium ja... 440 e-121 ref|YP_001240537.1| putative polysaccharide deacetylase [Bradyrh... 440 e-121 ref|YP_001206203.1| putative polysaccharide deacetylase [Bradyrh... 437 e-120 ref|NP_948097.1| polysaccharide deacetylase [Rhodopseudomonas pa... 384 e-105 ref|YP_001992074.1| polysaccharide deacetylase [Rhodopseudomonas... 384 e-105 >ref|NP_771610.1| hypothetical protein bll4970 [Bradyrhizobium japonicum USDA 110] dbj|BAC50235.1| bll4970 [Bradyrhizobium japonicum USDA 110] Length = 309 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/305 (68%), Positives = 249/305 (81%) Query: 29 VRPARRGRFQPLKSEEITPAFLDRTIRALKRWRYDIVGIDEACRRAVTLPERRRFACLTF 88 +RP RRG FQPL+ EITP FLDR IRALKRWRYDI+G+DE CRRAVTLPE+RRFA LTF Sbjct: 1 MRPRRRGGFQPLRENEITPQFLDRAIRALKRWRYDILGMDEVCRRAVTLPEKRRFAALTF 60 Query: 89 DGASKDIVTHAWPVLARHGVPFALYLPTAFPDGVGVAWWLVLEEIIARENRISMMIDGRE 148 DGASKD++T A+PVLARH VPF +Y+PTAFPDGVG AWWL LE++IARE+RIS+M+ +E Sbjct: 61 DGASKDLITFAYPVLARHAVPFTIYVPTAFPDGVGEAWWLGLEQVIARESRISLMMGEKE 120 Query: 149 RHFAIANLSDKYELFDFLSGWLRKLPPSDLSYALNDLARRYSADAAQSSRNASLDWQDLA 208 + F + ++K LF FL WLR LPP+D+S A+ DL RY D A SR AS+DW+DLA Sbjct: 121 QRFTVTGNAEKRALFSFLESWLRSLPPADVSAAIADLCTRYRIDLAALSREASMDWEDLA 180 Query: 209 KLAADPNVTFGSATVNYQALSSLRDADAQREMAMGKAVAESALRRQVRHFAFPFGDREAF 268 KLAADP VT GSATVNY L++++D+ A REM MGK VAE+A R++RH AFPFGDR +F Sbjct: 181 KLAADPLVTIGSATVNYPVLANMKDSAALREMTMGKVVAEAAFHREIRHLAFPFGDRASF 240 Query: 269 GRPHVVMAEEAGFASAVSTISGVVEAQGRTNLHALPRIAWDGRVRSLRMMRVLLSGVMFA 328 R HVVMAEEAGF SAVS I G+V+A+GRTNL ALPRI+WDGRVRSLRM+RVL SGV FA Sbjct: 241 RRSHVVMAEEAGFTSAVSAIPGIVDAEGRTNLRALPRISWDGRVRSLRMLRVLASGVAFA 300 Query: 329 PVRPT 333 PV+PT Sbjct: 301 PVKPT 305 >ref|YP_001240537.1| putative polysaccharide deacetylase [Bradyrhizobium sp. BTAi1] gb|ABQ36631.1| Putative Polysaccharide deacetylase [Bradyrhizobium sp. BTAi1] Length = 353 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 211/327 (64%), Positives = 259/327 (79%) Query: 1 MELAYFSGAFRLRERESGGAGVILRFARVRPARRGRFQPLKSEEITPAFLDRTIRALKRW 60 +ELAYFSG L R + GAG +LRF RVRP R+G FQPLK EITP FLD+ IRALKRW Sbjct: 13 LELAYFSGGTWLASRTTAGAGAVLRFERVRPRRKGAFQPLKHAEITPVFLDKMIRALKRW 72 Query: 61 RYDIVGIDEACRRAVTLPERRRFACLTFDGASKDIVTHAWPVLARHGVPFALYLPTAFPD 120 YDIV +DEAC RAV L E RRFACLTFDGA KD++THA+PVLARHGVPF +Y+ +AFPD Sbjct: 73 GYDIVALDEACERAVRLAEDRRFACLTFDGAWKDLITHAYPVLARHGVPFTVYVASAFPD 132 Query: 121 GVGVAWWLVLEEIIARENRISMMIDGRERHFAIANLSDKYELFDFLSGWLRKLPPSDLSY 180 G+G AWWL LE +IARE+RIS++ID RE+ F++A ++KYELF +L GWLRKLPP++ S Sbjct: 133 GLGEAWWLALEAVIARESRISLVIDHREQRFSVARPAEKYELFAYLWGWLRKLPPAERSI 192 Query: 181 ALNDLARRYSADAAQSSRNASLDWQDLAKLAADPNVTFGSATVNYQALSSLRDADAQREM 240 A+ DL R+S D SR A++DW D+A+LAADPNVT GSATV+Y AL+ L+DADAQRE+ Sbjct: 193 AIRDLCSRHSVDLVALSREAAMDWADIAQLAADPNVTIGSATVHYPALAHLKDADAQREI 252 Query: 241 AMGKAVAESALRRQVRHFAFPFGDREAFGRPHVVMAEEAGFASAVSTISGVVEAQGRTNL 300 AMGKAV E+ALRR VRH A+PFGDR+A R V+A +AGF SA + I GV++ +GRT L Sbjct: 253 AMGKAVLETALRRPVRHMAYPFGDRDAVRRSDAVLAAQAGFVSAATAIGGVIQPEGRTRL 312 Query: 301 HALPRIAWDGRVRSLRMMRVLLSGVMF 327 H LPRIAWDGR RSLR ++VL++GV Sbjct: 313 HLLPRIAWDGRSRSLRALKVLMAGVTL 339 >ref|YP_001206203.1| putative polysaccharide deacetylase [Bradyrhizobium sp. ORS 278] emb|CAL77978.1| Putative Polysaccharide deacetylase [Bradyrhizobium sp. ORS 278] Length = 353 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 216/338 (63%), Positives = 264/338 (78%), Gaps = 6/338 (1%) Query: 1 MELAYFSGAFRLRERESGGAGVILRFARVRPARRGRFQPLKSEEITPAFLDRTIRALKRW 60 +ELAYFSG R +GGAG ILRF RVRP R+G FQPL+ EITP FLD+ IR LKRW Sbjct: 13 LELAYFSGRTLTAWRATGGAGAILRFERVRPRRKGPFQPLRHAEITPRFLDQVIRKLKRW 72 Query: 61 RYDIVGIDEACRRAVTLPERRRFACLTFDGASKDIVTHAWPVLARHGVPFALYLPTAFPD 120 YDIV +DEAC RAV LPE RRFACLTFDG KD++ HA+PVLARHGVPF +++PTAFPD Sbjct: 73 GYDIVSLDEACARAVQLPEARRFACLTFDGGWKDLIVHAYPVLARHGVPFTVFVPTAFPD 132 Query: 121 GVGVAWWLVLEEIIARENRISMMIDGRERHFAIANLSDKYELFDFLSGWLRKLPPSDLSY 180 G+G AWWL LE +IARE RIS++I+ RE+ F++ ++K ELF +LSGWLRKLPP++LS Sbjct: 133 GLGEAWWLALEAVIAREVRISLVIEHREQRFSVFKPAEKAELFAYLSGWLRKLPPAELSV 192 Query: 181 ALNDLARRYSADAAQSSRNASLDWQDLAKLAADPNVTFGSATVNYQALSSLRDADAQREM 240 A+ DL R+S D A SR A++DW D+ +LAADPNVT GSATV+Y L+ L+DADAQRE+ Sbjct: 193 AIRDLCSRHSVDLAALSREAAMDWADINRLAADPNVTIGSATVHYPMLAHLKDADAQREI 252 Query: 241 AMGKAVAESALRRQVRHFAFPFGDREAFGRPHVVMAEEAGFASAVSTISGVVEAQGRTNL 300 AMGKAV E+ALRR VRH A+PFGD E+F R V+AE A F SA +TI GVV+++GRTNL Sbjct: 253 AMGKAVLETALRRPVRHMAYPFGDPESFRRSDAVLAERAAFISAATTIGGVVQSEGRTNL 312 Query: 301 HALPRIAWDGRVRSLRMMRVLLSGVM-----FAPVRPT 333 H LPRIAWDGR RSLR ++VL++GV FAP +PT Sbjct: 313 HMLPRIAWDGRSRSLRALKVLMAGVTLPRQKFAP-QPT 349 >ref|NP_948097.1| polysaccharide deacetylase [Rhodopseudomonas palustris CGA009] emb|CAE28196.1| Polysaccharide deacetylase [Rhodopseudomonas palustris CGA009] Length = 350 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/326 (57%), Positives = 241/326 (73%), Gaps = 1/326 (0%) Query: 1 MELAYFSGAFRLRERESGGAGVILRFARVRPARRGRFQPLKSEEITPAFLDRTIRALKRW 60 ++LAY SGA R+ E + GG GVILRF RVRPARR RFQPL+S EITP FLD +RALKRW Sbjct: 12 LQLAYASGAARMSEWKGGGCGVILRFDRVRPARRDRFQPLRSREITPQFLDSLLRALKRW 71 Query: 61 RYDIVGIDEACRRAVTLPERRRFACLTFDGASKDIVTHAWPVLARHGVPFALYLPTAFPD 120 ++ E C R RF CLTFDG S+DI T A+P+LARHG+PFA+YLPTAFPD Sbjct: 72 NCPVISTAEVCARIARGGSPGRFVCLTFDGGSRDITTFAYPILARHGMPFAVYLPTAFPD 131 Query: 121 GVGVAWWLVLEEIIARENRISMMIDGRERHFAIANLSDKYELFDFLSGWLRKLPPSDLSY 180 G+G AWWL LE++IAR RI+++ID ER F A L+DK ++F FL+ WLR +PP+ L+ Sbjct: 132 GIGEAWWLALEQVIARTERIALLIDHNERRFDTATLADKTQVFHFLASWLRTMPPAALTA 191 Query: 181 ALNDLARRYSADAAQSSRNASLDWQDLAKLAADPNVTFGSATVNYQALSSLRDADAQREM 240 A+ DL +RY+ D A +R A +DW ++ +LAADP VT GSATVNY L++L D A++E+ Sbjct: 192 AIQDLCKRYAVDLAVVTREAVMDWDEIGRLAADPKVTIGSATVNYPVLANLPDTAARKEI 251 Query: 241 AMGKAVAESALRRQVRHFAFPFGDREAFGRPHVVMAEEAGFASAVSTISGVVEAQGRTNL 300 AMG+AV ++AL R+ FAFPFG+ +FG HV MA+EAGFA A+++I GV+ A G + Sbjct: 252 AMGRAVLQAALGREAAQFAFPFGESGSFGAQHVAMAKEAGFAGAMTSIPGVIGA-GPIDP 310 Query: 301 HALPRIAWDGRVRSLRMMRVLLSGVM 326 ALPRIAWDGR RSLR +RV+LSG+M Sbjct: 311 LALPRIAWDGRQRSLRDLRVILSGLM 336 >ref|YP_001992074.1| polysaccharide deacetylase [Rhodopseudomonas palustris TIE-1] gb|ACF01599.1| polysaccharide deacetylase [Rhodopseudomonas palustris TIE-1] Length = 350 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/326 (57%), Positives = 241/326 (73%), Gaps = 1/326 (0%) Query: 1 MELAYFSGAFRLRERESGGAGVILRFARVRPARRGRFQPLKSEEITPAFLDRTIRALKRW 60 ++LAY SGA R+ E + GG G +LRF RVRPARR RFQPL+S EITP FLD +RALKRW Sbjct: 12 LQLAYASGAARISEWKGGGCGGVLRFDRVRPARRDRFQPLRSREITPQFLDSLLRALKRW 71 Query: 61 RYDIVGIDEACRRAVTLPERRRFACLTFDGASKDIVTHAWPVLARHGVPFALYLPTAFPD 120 ++ E C R RF CLTFDG S+DI T A+P+LARHGVPFA+YLPTAFPD Sbjct: 72 NCPVISAAEVCARIARGGSPGRFVCLTFDGGSRDITTFAYPILARHGVPFAVYLPTAFPD 131 Query: 121 GVGVAWWLVLEEIIARENRISMMIDGRERHFAIANLSDKYELFDFLSGWLRKLPPSDLSY 180 G+G AWWL LE++IAR RI+++ID ER F A L+DK ++F FL+ WLR +PP+ L+ Sbjct: 132 GIGEAWWLALEQVIARTERIALLIDHNERRFDTATLADKTQVFHFLASWLRTMPPAALTA 191 Query: 181 ALNDLARRYSADAAQSSRNASLDWQDLAKLAADPNVTFGSATVNYQALSSLRDADAQREM 240 A+ DL +RY+ D A +R A +DW ++ +LAADP VT GSATVNY L++L D A++E+ Sbjct: 192 AIQDLCKRYAVDLAVVTREAVMDWDEIGRLAADPKVTIGSATVNYPVLANLPDTAARKEI 251 Query: 241 AMGKAVAESALRRQVRHFAFPFGDREAFGRPHVVMAEEAGFASAVSTISGVVEAQGRTNL 300 AMG+AV ++AL R+ FAFPFG+ +FG HV MA+EAGFA A+++I GV+ A G T+ Sbjct: 252 AMGRAVLQAALGREAAQFAFPFGESGSFGAQHVAMAKEAGFAGAMTSIPGVIGA-GPTDP 310 Query: 301 HALPRIAWDGRVRSLRMMRVLLSGVM 326 ALPRIAWDGR RSLR +RV+LSG+M Sbjct: 311 LALPRIAWDGRQRSLRDLRVILSGLM 336