BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0025.p (399 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774174.1| hypothetical protein blr7534 [Bradyrhizobium ja... 577 e-162 ref|YP_001237786.1| hypothetical protein BBta_1670 [Bradyrhizobi... 540 e-151 ref|YP_001207983.1| putative signal peptide [Bradyrhizobium sp. ... 535 e-150 ref|YP_534568.1| hypothetical protein RPC_4727 [Rhodopseudomonas... 523 e-146 ref|YP_578392.1| hypothetical protein Nham_3197 [Nitrobacter ham... 503 e-140 >ref|NP_774174.1| hypothetical protein blr7534 [Bradyrhizobium japonicum USDA 110] dbj|BAC52799.1| blr7534 [Bradyrhizobium japonicum USDA 110] Length = 460 Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust. Identities = 287/404 (71%), Positives = 332/404 (82%), Gaps = 6/404 (1%) Query: 1 MRAL-----PLLLLGLAVTSAPALAQMKLQSKAAPASGPETRYFTSIDGLMDGNADVVLK 55 MRAL L+ LAV+ A AQMKL KA GPETRYFTSIDGLMDGNADV+LK Sbjct: 58 MRALLVCSTALVAALLAVSPEVASAQMKLSPKATVPGGPETRYFTSIDGLMDGNADVILK 117 Query: 56 ETRQGKTVTAAVLDVCYPADKSSDRKDRFVANLTVSGQTLSGTAQSVADKQPVTVKLNRK 115 ETRQGKTVTAAVLDVCYP K+SDRKDRFV NL V+GQTL+GT QS+ K PVTVKL RK Sbjct: 118 ETRQGKTVTAAVLDVCYPVAKNSDRKDRFVVNLQVAGQTLTGTTQSLGAKAPVTVKLLRK 177 Query: 116 QTGDGFEFRGQITIGQTVTEVASTDNSDLSEKEFQDNQATEDGITPQPKDFTDVSPESIG 175 TGD FEFRGQI IGQ VTEV S DNSDLSEKEF DNQ ++DGITPQPKDFTDVSPE+I Sbjct: 178 PTGDTFEFRGQIGIGQAVTEVTSPDNSDLSEKEFLDNQTSDDGITPQPKDFTDVSPEAIA 237 Query: 176 VRVKLDAAADFLKSLKGEAVEVGTSSLAVTCDAMRSGEQTINLTVDPEHAGALLAKAKSA 235 V+VKLDAA +FLKSLKG+ VEV +SL V CDA+R+GEQTIN++VDPE AGALLAK K+ Sbjct: 238 VKVKLDAATEFLKSLKGQEVEVTLASLTVGCDALRAGEQTINMSVDPERAGALLAKFKAM 297 Query: 236 PGVTAAGWTSGVVEMDRTIRFAAADWRDGDKLNRDKLATAIAGVLAKTLAAKPASATWNA 295 PGVTAAGWT+G+ EMDRTIRFAAADWRDGDK+NRDKLA A+AGVL +TLAAKP S +N Sbjct: 298 PGVTAAGWTAGMTEMDRTIRFAAADWRDGDKINRDKLAAAVAGVLGRTLAAKPVSQNFNP 357 Query: 296 NTGKLKLVLKRPSTVYPALGLTQNYEVTALVSPDKPGSSDRLMLWVSSPTVSTSDDSAGP 355 TGKLKLV KRP+ +P L LT EV L+SPDKPG++D+LMLW+ SP +T+D+S+G Sbjct: 358 ATGKLKLVFKRPNQDFPTLDLTDTIEVAGLISPDKPGTTDKLMLWIGSPATTTADESSGA 417 Query: 356 RLNLSDDSSSDEEGSETRDDNGAIDALIKELKGQRWDADKSVWR 399 +LNLSD++S+DEEG + DDNG+++AL KELKGQRWDADKSVW+ Sbjct: 418 KLNLSDEASADEEGDQP-DDNGSVEALAKELKGQRWDADKSVWK 460 >ref|YP_001237786.1| hypothetical protein BBta_1670 [Bradyrhizobium sp. BTAi1] gb|ABQ33880.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 397 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 269/380 (70%), Positives = 317/380 (83%), Gaps = 3/380 (0%) Query: 20 AQMKLQSKAAPASGPETRYFTSIDGLMDGNADVVLKETRQGKTVTAAVLDVCYPADKSSD 79 AQ K SKAAPA+ ETRYFT++DGLMDGNADV+LKE+RQGKTVT A LDVCYP K+SD Sbjct: 21 AQAKSGSKAAPAN--ETRYFTALDGLMDGNADVILKESRQGKTVTGATLDVCYPIAKNSD 78 Query: 80 RKDRFVANLTVSGQTLSGTAQSVADKQPVTVKLNRKQTGDGFEFRGQITIGQTVTEVAST 139 RKDRFV NL V+GQ+L+GT QS K+PV+VKL RK GD FEFRGQITIG+TVTEVAST Sbjct: 79 RKDRFVVNLAVNGQSLTGTTQSNGAKEPVSVKLTRKPNGDTFEFRGQITIGKTVTEVAST 138 Query: 140 DNSDLSEKEFQDNQATEDGITPQPKDFTDVSPESIGVRVKLDAAADFLKSLKGEAVEVGT 199 DNSD+SEKEFQ++Q+++DGI+ QPKDFTDVSPE++ VR+KLDA DFLKSLKG+ VEV Sbjct: 139 DNSDISEKEFQESQSSDDGISAQPKDFTDVSPEAVSVRLKLDAVVDFLKSLKGQDVEVSL 198 Query: 200 SSLAVTCDAMRSGEQTINLTVDPEHAGALLAKAKSAPGVTAAGWTSGVVEMDRTIRFAAA 259 SSL VTCDA+R+GEQTI++TVDPE AGAL+AKA++ GV AGWT+G+VEMDR IRFAAA Sbjct: 199 SSLNVTCDALRAGEQTISMTVDPERAGALIAKARAMNGVVTAGWTAGMVEMDRAIRFAAA 258 Query: 260 DWRDGDKLNRDKLATAIAGVLAKTLAAKPASATWNANTGKLKLVLKRPSTVYPALGLTQN 319 DWRDGDK+N+DKLA AI+ VLAKT AAKP SA WN TGKLKL LKRPS + PAL LT Sbjct: 259 DWRDGDKINKDKLAAAISDVLAKTYAAKPTSAAWNPVTGKLKLTLKRPSQLMPALELTDV 318 Query: 320 YEVTALVSPDKPGSSDRLMLWVSSPTVSTSDDSAGPRLNLSDDSSSDEEGSETRDDNGAI 379 EV+ LVS DKPG +D LMLW+SSPT +T D++AG +L LSD+SS DEE S+TRDD GAI Sbjct: 319 IEVSGLVSADKPGGTDALMLWISSPTTTTIDEAAGGKLVLSDESSGDEE-SDTRDDGGAI 377 Query: 380 DALIKELKGQRWDADKSVWR 399 + L K LK +RWDAD SVW+ Sbjct: 378 EELAKALKAKRWDADNSVWK 397 >ref|YP_001207983.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL79768.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 396 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 268/380 (70%), Positives = 314/380 (82%), Gaps = 4/380 (1%) Query: 20 AQMKLQSKAAPASGPETRYFTSIDGLMDGNADVVLKETRQGKTVTAAVLDVCYPADKSSD 79 AQ K +KA PA+ ETRYFT++DGLMDGNADV+LKETRQGKTVTAA LDVCYP K+SD Sbjct: 21 AQSKSGTKA-PAN--ETRYFTALDGLMDGNADVILKETRQGKTVTAATLDVCYPVAKNSD 77 Query: 80 RKDRFVANLTVSGQTLSGTAQSVADKQPVTVKLNRKQTGDGFEFRGQITIGQTVTEVAST 139 RKDRFV NLTV+GQTL+G QS K+PVTVKL RK TGD FEFRGQI IG+TVTEVAST Sbjct: 78 RKDRFVVNLTVNGQTLTGATQSNGAKEPVTVKLTRKPTGDNFEFRGQIVIGKTVTEVAST 137 Query: 140 DNSDLSEKEFQDNQATEDGITPQPKDFTDVSPESIGVRVKLDAAADFLKSLKGEAVEVGT 199 DN+D+SEKEFQ++Q+ +DGIT QPKDFTDVSPE++ VR+KLDA DFLKSLKGE VEV Sbjct: 138 DNADVSEKEFQESQSNDDGITAQPKDFTDVSPEAVSVRLKLDAVPDFLKSLKGEHVEVSL 197 Query: 200 SSLAVTCDAMRSGEQTINLTVDPEHAGALLAKAKSAPGVTAAGWTSGVVEMDRTIRFAAA 259 SSL V+CDA+R+GEQTI++TVDPE AGAL+AKA++ GV AGWT+G VEMDRTIRFAAA Sbjct: 198 SSLIVSCDALRAGEQTISMTVDPERAGALIAKARATTGVVTAGWTAGTVEMDRTIRFAAA 257 Query: 260 DWRDGDKLNRDKLATAIAGVLAKTLAAKPASATWNANTGKLKLVLKRPSTVYPALGLTQN 319 DWRDGDK+NRDKLA AI+ VLAKT AAKP SA WN TGKLKL LKRPS + P+L LT Sbjct: 258 DWRDGDKINRDKLANAISDVLAKTYAAKPTSAAWNPVTGKLKLTLKRPSQLMPSLDLTDV 317 Query: 320 YEVTALVSPDKPGSSDRLMLWVSSPTVSTSDDSAGPRLNLSDDSSSDEEGSETRDDNGAI 379 E+T LVSPDKPG +D L+LW+SSPT +T D+S+ +L LSD+SS DEE S+ RDD+G I Sbjct: 318 IELTGLVSPDKPGGADALILWISSPTTTTVDESSAAKLILSDESSGDEE-SDARDDSGTI 376 Query: 380 DALIKELKGQRWDADKSVWR 399 + L K K +RWDAD SVW+ Sbjct: 377 EELAKAFKAKRWDADNSVWK 396 >ref|YP_534568.1| hypothetical protein RPC_4727 [Rhodopseudomonas palustris BisB18] gb|ABD90249.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 397 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 263/399 (65%), Positives = 326/399 (81%), Gaps = 2/399 (0%) Query: 1 MRALPLLLLGLAVTSAPALAQMKLQSKAAPASGPETRYFTSIDGLMDGNADVVLKETRQG 60 MRAL L+ L S ALAQ K KAA A ETRYFTS+DGLMDGNADV+LKETRQG Sbjct: 1 MRALVFGLICLMPASEIALAQTKATPKAA-APTTETRYFTSLDGLMDGNADVILKETRQG 59 Query: 61 KTVTAAVLDVCYPADKSSDRKDRFVANLTVSGQTLSGTAQSVADKQPVTVKLNRKQTGDG 120 KTVTAA LDVCYPA+K SDRKDRFVA+L VSGQTL+G+ QS+ DK PVT+KL RK TGD Sbjct: 60 KTVTAATLDVCYPAEKGSDRKDRFVADLAVSGQTLTGSTQSLGDKLPVTIKLTRKPTGDT 119 Query: 121 FEFRGQITIGQTVTEVASTDNSDLSEKEFQDNQATEDGITPQPKDFTDVSPESIGVRVKL 180 FEF+GQ+ IG+TVTEV+STDN+DLSEKE+QDNQAT+D I P+DFT+VSPE+I VRVKL Sbjct: 120 FEFKGQVGIGKTVTEVSSTDNADLSEKEYQDNQATDDSIAVAPRDFTEVSPEAIAVRVKL 179 Query: 181 DAAADFLKSLKGEAVEVGTSSLAVTCDAMRSGEQTINLTVDPEHAGALLAKAKSAPGVTA 240 +FLK+LKG+ V V +SL V CDA+R+GEQ IN++VDP+ A AL+A+AK+ PGV A Sbjct: 180 GTVVEFLKALKGQNVAVSLASLTVGCDALRAGEQVINISVDPDRAAALIARAKATPGVVA 239 Query: 241 AGWTSGVVEMDRTIRFAAADWRDGDKLNRDKLATAIAGVLAKTLAAKPASATWNANTGKL 300 AGWTSG+++M R IRF AA+WRD DKLNRDKL+TAI+ VL+KTL+AK AS+ W+ +TGKL Sbjct: 240 AGWTSGIIDMGRAIRFPAAEWRDADKLNRDKLSTAISDVLSKTLSAKLASSVWSDDTGKL 299 Query: 301 KLVLKRPSTVYPALGLTQNYEVTALVSPDKPGSSDRLMLWVSSPTVSTSDDSAGPRLNLS 360 L KRPS V PALGLT+ EVTAL PDKPG++D +MLWVSSP+++T+D++ GP+L L+ Sbjct: 300 TLSFKRPSQVMPALGLTETIEVTALAGPDKPGATDHMMLWVSSPSIATADETEGPKLGLT 359 Query: 361 DDSSSDEEGSETRDDNGAIDALIKELKGQRWDADKSVWR 399 D +SSDEE +E +DDNG++DAL ++L+GQRWD DKS W+ Sbjct: 360 DATSSDEE-AEPKDDNGSLDALARDLRGQRWDPDKSAWK 397 >ref|YP_578392.1| hypothetical protein Nham_3197 [Nitrobacter hamburgensis X14] gb|ABE63932.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 399 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 250/400 (62%), Positives = 304/400 (76%), Gaps = 2/400 (0%) Query: 1 MRALPLLLLGLAVTSAPALAQMKLQSKAAPASGPETRYFTSIDGLMDGNADVVLKETRQG 60 MRAL L L+GL + +L P G E RYFTSIDGLM+GNADV+LKETRQG Sbjct: 1 MRALRLCLVGLVIALPGSLFAQDRPLPRTPPGGAEVRYFTSIDGLMEGNADVILKETRQG 60 Query: 61 KTVTAAVLDVCYPADKSSDRKDRFVANLTVSGQTLSGTAQSVADKQPVTVKLNRKQTGDG 120 KTVTAAVLDVCYPA K SDRKDRFV NL V+G TL+GT QS+ DK PV V L RK TGD Sbjct: 61 KTVTAAVLDVCYPAKKGSDRKDRFVVNLAVNGSTLTGTTQSIGDKLPVEVNLTRKPTGDT 120 Query: 121 FEFRGQITIGQTVTEVASTDNSDLSEKEFQDNQATEDGITPQPKDFTDVSPESIGVRVKL 180 FEF G++++GQTVTEV STDNSDLSE EF D + T+DGI P+DFT+VSPE+I V+VKL Sbjct: 121 FEFEGRVSVGQTVTEVTSTDNSDLSEAEFNDARTTDDGIIATPQDFTEVSPEAIAVKVKL 180 Query: 181 DAAADFLKSLKGEAVEVGTSSLAVTCDAMRSGEQTINLTVDPEHAGALLAKAKSAPGVTA 240 DAA D LK L+G+ VEV +SL V C+ +R+G Q I++ VDPE A AL+AK K++PGV A Sbjct: 181 DAAVDLLKGLRGQHVEVALNSLDVNCEVLRAGAQVIDINVDPERAPALVAKLKASPGVIA 240 Query: 241 AGWTSGVVEMDRTIRFAAADWRDGDKLNRDKLATAIAGVLAKTLAAKPASATWNANTGKL 300 AGW++G+ +M+RTIRF AA+WRD KLNR+KLATAI+GVL K L AKP S W+ +TGKL Sbjct: 241 AGWSTGMFDMERTIRFPAAEWRDNGKLNRNKLATAISGVLEKALDAKPVSTKWSDDTGKL 300 Query: 301 KLVLKRPSTVYPALGLTQNYEVTALVSPDKPGSSDRLMLWVSSPTVSTSDDSAGPRLNLS 360 L KRPS V PAL LT EVTAL PDKPG SD +MLWV P+ +T+D++ GPRL L+ Sbjct: 301 TLTFKRPSDVVPALKLTDTIEVTALPGPDKPGGSDHIMLWVGVPSTTTTDETEGPRLGLA 360 Query: 361 DDSSS-DEEGSETRDDNGAIDALIKELKGQRWDADKSVWR 399 DD+S+ D+EG ET DD+G++DAL K+ K QRWDADKS W+ Sbjct: 361 DDTSAGDDEGVET-DDSGSVDALAKQFKAQRWDADKSAWK 399