BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0195.0019.p         (138 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_578393.1| hypothetical protein Nham_3198 [Nitrobacter ham...   164   5e-39
ref|NP_774175.1| hypothetical protein bll7535 [Bradyrhizobium ja...   163   1e-38
ref|YP_001207984.1| hypothetical protein BRADO6117 [Bradyrhizobi...   155   3e-36
ref|ZP_01045216.1| hypothetical protein NB311A_14792 [Nitrobacte...   154   4e-36
ref|YP_485452.1| hypothetical protein RPB_1833 [Rhodopseudomonas...   154   4e-36

>ref|YP_578393.1| hypothetical protein Nham_3198 [Nitrobacter hamburgensis X14]
 gb|ABE63933.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 135

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 94/125 (75%)

Query: 14  ALALVAAALDAGPARAQEEFPFGFVMTLDAARMPGSKRIPSIEVGDNGEVILELWCDGGK 73
           A+A+    + A PA AQ+ FPFGF MTLDA   PGSKR+PS+E+GD+GE  LELWC GGK
Sbjct: 11  AVAIAVGGIIASPASAQDGFPFGFEMTLDAPPQPGSKRVPSLEIGDSGEAKLELWCKGGK 70

Query: 74  GQFSVAGNTIVFVPGAMENRTCTPERAQADRDLLAALGDMTGWRRHGDEVTFTGSKSLRF 133
           GQFSVAGNT++FV G +E+R+C PE+AQAD DL+AAL     W R GD V+F G  +LRF
Sbjct: 71  GQFSVAGNTVIFVAGPLEDRSCPPEKAQADDDLVAALTAAVTWERQGDAVSFAGPTTLRF 130

Query: 134 VINSN 138
            +N+N
Sbjct: 131 HLNTN 135


>ref|NP_774175.1| hypothetical protein bll7535 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52800.1| bll7535 [Bradyrhizobium japonicum USDA 110]
          Length = 150

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/138 (55%), Positives = 101/138 (73%), Gaps = 6/138 (4%)

Query: 1   MISMRRGLNGGIAALALVAAALDAGPARAQEEFPFGFVMTLDAARMPGSKRIPSIEVGDN 60
           M+S+R  +   +A LA+   A      RA++ FPFG  +TL+A+  PGSKRIP+IE+GDN
Sbjct: 19  MVSLRHMVCAMVAVLAMSTVA------RAEDGFPFGTELTLEASPQPGSKRIPNIEIGDN 72

Query: 61  GEVILELWCDGGKGQFSVAGNTIVFVPGAMENRTCTPERAQADRDLLAALGDMTGWRRHG 120
           GEV+LELWC GGKGQFSVAGNT++FVPG +++R+C P +AQAD DL+AALG +  W+R G
Sbjct: 73  GEVVLELWCKGGKGQFSVAGNTVIFVPGQIQDRSCPPAKAQADDDLVAALGSVETWKRQG 132

Query: 121 DEVTFTGSKSLRFVINSN 138
           D +T  G K LRF  N N
Sbjct: 133 DVLTLLGPKPLRFRANGN 150


>ref|YP_001207984.1| hypothetical protein BRADO6117 [Bradyrhizobium sp. ORS 278]
 emb|CAL79769.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 116

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 86/112 (76%)

Query: 27  ARAQEEFPFGFVMTLDAARMPGSKRIPSIEVGDNGEVILELWCDGGKGQFSVAGNTIVFV 86
           A + EEFPFG  MTLDA   PGSKR+P +++GDNGE +LELWC GGKGQFSVAGNT+VF+
Sbjct: 5   AASAEEFPFGMEMTLDALPQPGSKRVPDLDIGDNGETVLELWCKGGKGQFSVAGNTVVFI 64

Query: 87  PGAMENRTCTPERAQADRDLLAALGDMTGWRRHGDEVTFTGSKSLRFVINSN 138
            G +E+R C   RAQAD +L+AAL   T W+R GD +TF G K+LRF +N+N
Sbjct: 65  AGTIEDRNCPAARAQADDELIAALSAATNWKRQGDLITFIGPKTLRFRLNTN 116


>ref|ZP_01045216.1| hypothetical protein NB311A_14792 [Nitrobacter sp. Nb-311A]
 gb|EAQ36544.1| hypothetical protein NB311A_14792 [Nitrobacter sp. Nb-311A]
          Length = 135

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/137 (51%), Positives = 98/137 (71%), Gaps = 2/137 (1%)

Query: 2   ISMRRGLNGGIAALALVAAALDAGPARAQEEFPFGFVMTLDAARMPGSKRIPSIEVGDNG 61
           ++ R     G+ A+AL   A++A PA AQ+ FPFG  MTLDA+  PGSKR+PS+E+GD+G
Sbjct: 1   MAARFAFLSGVVAIAL--GAVNAWPASAQDGFPFGLEMTLDASPQPGSKRVPSLEIGDSG 58

Query: 62  EVILELWCDGGKGQFSVAGNTIVFVPGAMENRTCTPERAQADRDLLAALGDMTGWRRHGD 121
               ELWC GGKGQFSVAG T++F  G +E+R+C P++A+AD DL+AAL     W R GD
Sbjct: 59  GAKFELWCKGGKGQFSVAGETVIFAAGPLEDRSCPPDKAKADDDLVAALSAAVTWERQGD 118

Query: 122 EVTFTGSKSLRFVINSN 138
           E++F G  ++RF +N+N
Sbjct: 119 EISFIGPTTVRFHLNTN 135


>ref|YP_485452.1| hypothetical protein RPB_1833 [Rhodopseudomonas palustris HaA2]
 gb|ABD06541.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 136

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 93/116 (80%), Gaps = 2/116 (1%)

Query: 25  GPARAQE--EFPFGFVMTLDAARMPGSKRIPSIEVGDNGEVILELWCDGGKGQFSVAGNT 82
           GPA+AQ   EFPFG  MTL+AA  PGSKRIP++E+GD GEV LELWC GG GQFSVAGNT
Sbjct: 21  GPAKAQATGEFPFGLEMTLEAAPKPGSKRIPNLEIGDKGEVRLELWCKGGSGQFSVAGNT 80

Query: 83  IVFVPGAMENRTCTPERAQADRDLLAALGDMTGWRRHGDEVTFTGSKSLRFVINSN 138
           ++FVPGA+E+R C P+RAQAD  L+AAL   TGW R GD VTF+G ++LRF +NSN
Sbjct: 81  VIFVPGALEDRNCPPDRAQADDALVAALTAATGWSRQGDYVTFSGGETLRFRLNSN 136