BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0016.p (581 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08627406.1| hypothetical protein CSIRO_0466 [Bradyrhizobi... 841 0.0 ref|YP_534572.1| ABC transporter-like protein [Rhodopseudomonas ... 832 0.0 ref|NP_946486.1| ABC transporter permease/ATP-binding protein [R... 826 0.0 ref|YP_001990341.1| ABC transporter [Rhodopseudomonas palustris ... 823 0.0 ref|NP_774177.1| ATP-binding protein [Bradyrhizobium japonicum U... 813 0.0 >ref|ZP_08627406.1| hypothetical protein CSIRO_0466 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10032.1| hypothetical protein CSIRO_0466 [Bradyrhizobiaceae bacterium SG-6C] Length = 582 Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/574 (71%), Positives = 474/574 (82%) Query: 1 VNNIRSTLATVWRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQ 60 +N I STL VWRIA+PYF SEDKWAG LL AV+ IELA VGINVLL WNNRFYNALQ Sbjct: 1 MNGIGSTLKAVWRIAAPYFRSEDKWAGLALLTAVVVIELATVGINVLLNSWNNRFYNALQ 60 Query: 61 ERNWDSFVSEIIYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRM 120 E NWDSFVSEIIYF+V+V FI++AVYQLYLNQWLQIRWR+WMT YLG+WL +ANHYRM Sbjct: 61 EHNWDSFVSEIIYFTVIVTIFIIIAVYQLYLNQWLQIRWRKWMTERYLGEWLSRANHYRM 120 Query: 121 QLQGDAADNPDQRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGT 180 QLQGDAADNPDQRMTDDVKLFVDRTL +G+GLL+SVVTLASF+ +LW LS+ APLHLFG Sbjct: 121 QLQGDAADNPDQRMTDDVKLFVDRTLNIGIGLLNSVVTLASFVVILWTLSSAAPLHLFGK 180 Query: 181 EYSIPGYLVWCALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIAL 240 + IPGY+VW ALIY+A+GT LTHLIG PLVG+DF+QQ++EADFRFNLVRVRENSEQIAL Sbjct: 181 DIDIPGYMVWGALIYAAIGTSLTHLIGRPLVGLDFRQQKFEADFRFNLVRVRENSEQIAL 240 Query: 241 LQGEQAERERLRVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKI 300 L+G+ AER+RL RFG VV+NW+ +M+RTKKITAFTASY+QASVIFPY++VA AYFA K+ Sbjct: 241 LEGDVAERQRLLTRFGHVVDNWLGIMSRTKKITAFTASYSQASVIFPYLMVASAYFANKM 300 Query: 301 QLGGMMQTASAFSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQ 360 QLGGMMQTASAF +VQGA S+FV+ YR LAEWQAVV RLDGFE GIAAA L I+ Sbjct: 301 QLGGMMQTASAFGSVQGALSFFVSTYRTLAEWQAVVARLDGFEHGIAAAKALASDSGSIK 360 Query: 361 VTATPGGGAVSLQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIW 420 GA++L DL+L LP+G PL+ F R GE TL+TGPSG+GKSTLFRAIAGIW Sbjct: 361 PATAANAGAIALDDLLLTLPNGKPLVQTSAFELRSGERTLVTGPSGSGKSTLFRAIAGIW 420 Query: 421 PFGDGAVEIPANASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLTAVGLPQLA 480 PFG G + IP ASLMMLPQRPY P+GSL A+ YP + + ++ + L VGLP LA Sbjct: 421 PFGSGTIAIPKGASLMMLPQRPYFPVGSLASAITYPSKDDTYSEAQLGEALKLVGLPALA 480 Query: 481 ARLEEHAHWNRMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLP 540 RL E HWNR LSLGEQQRLGIARALLHAPQ+LFLDEATASLDEP+EA LYRLI E++P Sbjct: 481 ERLNEEGHWNRTLSLGEQQRLGIARALLHAPQYLFLDEATASLDEPSEALLYRLIVEKMP 540 Query: 541 GTTVVSIGHRSTLDAFHQRNVTLVRDGDRFTLRD 574 TT+VSIGHR+TL+AFHQR V LVR GDRFTL D Sbjct: 541 QTTIVSIGHRTTLEAFHQREVALVRSGDRFTLGD 574 >ref|YP_534572.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB18] gb|ABD90253.1| ABC transporter-like [Rhodopseudomonas palustris BisB18] Length = 579 Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/580 (68%), Positives = 473/580 (81%), Gaps = 1/580 (0%) Query: 1 VNNIRSTLATVWRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQ 60 +NNIRSTLATVWRIA+PY+ S+DKW GLL+AVIAIELA+VG+ VL +WNN FYNALQ Sbjct: 1 MNNIRSTLATVWRIAAPYYRSDDKWMAWGLLSAVIAIELAVVGLMVLFNRWNNVFYNALQ 60 Query: 61 ERNWDSFVSEIIYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRM 120 E+N+D F +I YF VL A FI L VYQLYLNQWLQIRWR++MT YLG WL A HY+M Sbjct: 61 EKNFDVFTYQIGYFCVLAAIFIALKVYQLYLNQWLQIRWRRFMTERYLGGWLHDARHYQM 120 Query: 121 QLQGDAADNPDQRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGT 180 QL GDAADNPDQR+ +D +LFV+RTL LG+GLLSS+VTL SF+ +LWGLS APLH+FG Sbjct: 121 QLLGDAADNPDQRIAEDTQLFVERTLALGVGLLSSIVTLGSFVVILWGLSEAAPLHVFGR 180 Query: 181 EYSIPGYLVWCALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIAL 240 + IPGYLVW ALIY+ +GT LTHLIGWPLVG++F+QQ++EADFRFNLVR RENSEQIAL Sbjct: 181 DIPIPGYLVWGALIYAIIGTWLTHLIGWPLVGLNFQQQRFEADFRFNLVRARENSEQIAL 240 Query: 241 LQGEQAERERLRVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKI 300 L+GE AERERL VRF RVVENW+ +M RTKK+TAFTASY+QAS+IFPY+LVAPAYFA K+ Sbjct: 241 LRGEPAERERLAVRFSRVVENWLGIMTRTKKLTAFTASYSQASIIFPYILVAPAYFAGKV 300 Query: 301 QLGGMMQTASAFSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQ 360 QLGGMMQTASAF +VQ A S+F+T YR LAEWQAVV RLDGFE I + L D + Sbjct: 301 QLGGMMQTASAFGSVQDALSFFITAYRTLAEWQAVVARLDGFERSIETVTALAAEADLVH 360 Query: 361 VTATPGGGAVSLQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIW 420 V AT ++ L ++LPDGT L++AD R + TL+TGPSG+GKSTLFRAIAGIW Sbjct: 361 V-ATAESSGIAFNKLAVKLPDGTALVSADGVQLRGDQRTLITGPSGSGKSTLFRAIAGIW 419 Query: 421 PFGDGAVEIPANASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLTAVGLPQLA 480 PFG G V +P A+LMMLPQRPY P+G L AV YP E + A ++ + +TAVGLP LA Sbjct: 420 PFGSGRVVVPTGATLMMLPQRPYFPVGPLDAAVSYPAETGSYAAAQLSEAITAVGLPALA 479 Query: 481 ARLEEHAHWNRMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLP 540 +RLE+HAHWNRMLSLGEQQRLG+ARALLH P +LFLDEATASLDEP+EAALYRL+AERLP Sbjct: 480 SRLEQHAHWNRMLSLGEQQRLGLARALLHKPDYLFLDEATASLDEPSEAALYRLLAERLP 539 Query: 541 GTTVVSIGHRSTLDAFHQRNVTLVRDGDRFTLRDAVKVAA 580 GTTVVSIGHRSTL+AFHQR++TL RDG F L+D V++ A Sbjct: 540 GTTVVSIGHRSTLNAFHQRDMTLARDGSHFALKDQVRLPA 579 >ref|NP_946486.1| ABC transporter permease/ATP-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE26578.1| probable ABC transporter with fused ATPase and permease domains for long chain FA substrate [Rhodopseudomonas palustris CGA009] Length = 586 Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/580 (67%), Positives = 474/580 (81%), Gaps = 2/580 (0%) Query: 1 VNNIRSTLATVWRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQ 60 ++NI+ TLAT WRIA+PYF++EDKW GRGLLAAV+ IELA+VG++VL +WNN FYNALQ Sbjct: 1 MSNIKGTLATAWRIAAPYFSAEDKWMGRGLLAAVVVIELAVVGLSVLFNRWNNVFYNALQ 60 Query: 61 ERNWDSFVSEIIYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRM 120 ERN+D F +IIYF VL A +I L VYQLYLNQWLQIRWR+WMT YLG WL ANHY+M Sbjct: 61 ERNYDVFTYQIIYFCVLAAIWIALKVYQLYLNQWLQIRWRKWMTERYLGGWLHDANHYQM 120 Query: 121 QLQGDAADNPDQRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGT 180 QL GDAADNPDQR+ +D +LFV+RTL LG+GLL++VVTLASF+ +LWGLSNEAPLHLFG Sbjct: 121 QLTGDAADNPDQRIAEDTQLFVERTLALGIGLLNAVVTLASFVVILWGLSNEAPLHLFGQ 180 Query: 181 EYSIPGYLVWCALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIAL 240 + IPGYLVW ALIY+ALGT LTH IG PLV ++F+QQ+YEADFRFNLVR REN+EQIAL Sbjct: 181 DVPIPGYLVWGALIYAALGTALTHWIGSPLVDLNFRQQRYEADFRFNLVRARENAEQIAL 240 Query: 241 LQGEQAERERLRVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKI 300 L+GE AER++L RF V EN++ +M+RTK++TAFTASY+QAS+IFPY+LVAPA+FAQK+ Sbjct: 241 LRGEPAERDKLSSRFSYVAENFMRIMSRTKRLTAFTASYSQASIIFPYILVAPAFFAQKV 300 Query: 301 QLGGMMQTASAFSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQ 360 QLGGMMQTASAF +VQ + S+F+T YR LAEWQ+V+ RLDGFE I A+ T+RD+ Sbjct: 301 QLGGMMQTASAFGSVQDSLSFFITAYRTLAEWQSVLQRLDGFERAIEGAA--TRRDNPGV 358 Query: 361 VTATPGGGAVSLQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIW 420 + G + L+DL L LP G PL++AD F E TL+ GPSGAGKSTLFRAIAGIW Sbjct: 359 MRVPAAAGGIELKDLNLTLPAGAPLISADGFKIGDNERTLIVGPSGAGKSTLFRAIAGIW 418 Query: 421 PFGDGAVEIPANASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLTAVGLPQLA 480 PFG G++ IPA+A+LMMLPQRPY P+G L A+VYP E+ F +V +VL VGLP LA Sbjct: 419 PFGSGSIAIPADATLMMLPQRPYFPVGELRAAIVYPAESGAFSDAQVAEVLREVGLPALA 478 Query: 481 ARLEEHAHWNRMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLP 540 RL++H HWNR LSLGEQQRLGIARALLHAPQ+LFLDEATASLDEP+EAALY+L+ +LP Sbjct: 479 ERLDQHGHWNRTLSLGEQQRLGIARALLHAPQYLFLDEATASLDEPSEAALYKLLDRKLP 538 Query: 541 GTTVVSIGHRSTLDAFHQRNVTLVRDGDRFTLRDAVKVAA 580 GTT+VSIGHRSTL+AFHQR+ L R GD FTL D K AA Sbjct: 539 GTTIVSIGHRSTLEAFHQRDAVLSRTGDGFTLHDRAKAAA 578 >ref|YP_001990341.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gb|ACE99865.1| ABC transporter domain protein [Rhodopseudomonas palustris TIE-1] Length = 586 Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/580 (67%), Positives = 472/580 (81%), Gaps = 2/580 (0%) Query: 1 VNNIRSTLATVWRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQ 60 ++NI+ TLAT WRIA+PYF++EDKW GRGLLAAV+ IELA+VG++VL +WNN FYNALQ Sbjct: 1 MSNIKGTLATAWRIAAPYFSAEDKWMGRGLLAAVVVIELAVVGLSVLFNRWNNVFYNALQ 60 Query: 61 ERNWDSFVSEIIYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRM 120 ERN+D F +IIYF VL A +I L VYQLYLNQWLQIRWR+WMT YLG WL ANHY+M Sbjct: 61 ERNYDVFTYQIIYFCVLAAIWIALKVYQLYLNQWLQIRWRKWMTERYLGGWLHDANHYQM 120 Query: 121 QLQGDAADNPDQRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGT 180 QL GDAADNPDQR+ +D +LFV+RTL LG+GLL++VVTLASF+ +LWGLSNEAPLHLFG Sbjct: 121 QLTGDAADNPDQRIAEDTQLFVERTLALGIGLLNAVVTLASFVVILWGLSNEAPLHLFGQ 180 Query: 181 EYSIPGYLVWCALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIAL 240 + IPGYLVW ALIY+ALGT LTH IG PLV ++F+QQ+YEADFRFNLVR REN+EQIAL Sbjct: 181 DVPIPGYLVWGALIYAALGTALTHWIGSPLVDLNFRQQRYEADFRFNLVRARENAEQIAL 240 Query: 241 LQGEQAERERLRVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKI 300 L+GE AER++L RF V EN++ +M+RTK++TAFTASY+QAS+IFPY+LVAPA+FAQK+ Sbjct: 241 LRGEPAERDKLSSRFSYVAENFMRIMSRTKRLTAFTASYSQASIIFPYILVAPAFFAQKV 300 Query: 301 QLGGMMQTASAFSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQ 360 QLGGMMQTASAF +VQ + S+F+T YR LAEWQ+V+ RLDGFE I AS T+RD Sbjct: 301 QLGGMMQTASAFGSVQDSLSFFITAYRTLAEWQSVLQRLDGFERAIEGAS--TRRDSPGV 358 Query: 361 VTATPGGGAVSLQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIW 420 + G + L+DL L LP G PL++AD F E TL+ GPSGAGKSTLFRAIAGIW Sbjct: 359 MRVPAAAGGIELKDLNLTLPAGAPLISADGFKIGDNERTLIVGPSGAGKSTLFRAIAGIW 418 Query: 421 PFGDGAVEIPANASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLTAVGLPQLA 480 PFG G++ IPA+A+LMMLPQRPY P+G L A+VYP E+ F +V +VL VGLP LA Sbjct: 419 PFGSGSIAIPADATLMMLPQRPYFPVGELRAAIVYPAESGAFSDVQVAEVLREVGLPALA 478 Query: 481 ARLEEHAHWNRMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLP 540 RL++H HWNR LSLGEQQRLGIARALLHAPQ+LFLDEATASLDEP+EAALY+L+ +LP Sbjct: 479 ERLDQHGHWNRTLSLGEQQRLGIARALLHAPQYLFLDEATASLDEPSEAALYKLLDRKLP 538 Query: 541 GTTVVSIGHRSTLDAFHQRNVTLVRDGDRFTLRDAVKVAA 580 GTT+VSIGHRSTL+AFHQR+ L R GD F L D K AA Sbjct: 539 GTTIVSIGHRSTLEAFHQRDAVLSRTGDGFALHDRAKAAA 578 >ref|NP_774177.1| ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52802.1| blr7537 [Bradyrhizobium japonicum USDA 110] Length = 587 Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/567 (68%), Positives = 462/567 (81%) Query: 1 VNNIRSTLATVWRIASPYFNSEDKWAGRGLLAAVIAIELAIVGINVLLTQWNNRFYNALQ 60 + NI +TLA VWRIA PYF SEDKW GRGLLAAVIA+ELA+V I+VL+ QW NRFY+ALQ Sbjct: 1 MKNISATLAIVWRIAVPYFRSEDKWVGRGLLAAVIAMELALVAIDVLVNQWQNRFYSALQ 60 Query: 61 ERNWDSFVSEIIYFSVLVAFFILLAVYQLYLNQWLQIRWRQWMTTHYLGDWLRQANHYRM 120 +WD+FV++I F L + FI LAVY+LYLNQWLQIRWRQW+T HYLG+WL+ A HYRM Sbjct: 61 ASDWDAFVTQIWIFVALASMFIALAVYKLYLNQWLQIRWRQWLTRHYLGEWLQGATHYRM 120 Query: 121 QLQGDAADNPDQRMTDDVKLFVDRTLTLGLGLLSSVVTLASFLTLLWGLSNEAPLHLFGT 180 QL+GDAADNPDQR+T+DVK FV++TLT+GLGLLSS+VTL SF+ +LWGLSN APLHLFGT Sbjct: 121 QLKGDAADNPDQRITEDVKNFVEQTLTIGLGLLSSIVTLFSFVIILWGLSNAAPLHLFGT 180 Query: 181 EYSIPGYLVWCALIYSALGTVLTHLIGWPLVGIDFKQQQYEADFRFNLVRVRENSEQIAL 240 + IPGYL W AL+Y+ GT LTH IG PLV ++F+QQ+YEADFRF+LVRVRENSEQIAL Sbjct: 181 DLMIPGYLCWGALVYAIFGTALTHWIGAPLVNLNFEQQRYEADFRFHLVRVRENSEQIAL 240 Query: 241 LQGEQAERERLRVRFGRVVENWIALMNRTKKITAFTASYNQASVIFPYVLVAPAYFAQKI 300 L+GE AER RL RFG V+ NW A+M+RTK++TAFTASY QA+VIFPYVLVAPA+FA+KI Sbjct: 241 LKGEGAERGRLLGRFGLVIGNWYAIMSRTKRLTAFTASYQQAAVIFPYVLVAPAFFAKKI 300 Query: 301 QLGGMMQTASAFSNVQGAFSYFVTIYRQLAEWQAVVNRLDGFEAGIAAASNLTKRDDRIQ 360 QLG MMQTASAFS+VQGA S+FVT YR LAEW+++V RLDGFE + +A+NL + I Sbjct: 301 QLGDMMQTASAFSSVQGALSFFVTAYRSLAEWRSIVARLDGFEMSVDSAANLPAHEPAIA 360 Query: 361 VTATPGGGAVSLQDLVLRLPDGTPLLNADRFGFRKGEGTLMTGPSGAGKSTLFRAIAGIW 420 + A G + L+ L + LP+GTPL+ A F + E L+TGPSG+GKSTLFRAIAGIW Sbjct: 361 LEAAGGDRNIGLEQLCVNLPNGTPLVAAGAFAIQVPERVLVTGPSGSGKSTLFRAIAGIW 420 Query: 421 PFGDGAVEIPANASLMMLPQRPYLPIGSLHDAVVYPGEAAQFDAGRVRDVLTAVGLPQLA 480 PFG G + +P A LMMLPQRPY P+G L DAVVYP FDA RVRD L AVGLP LA Sbjct: 421 PFGTGTIVVPERAKLMMLPQRPYFPVGVLRDAVVYPAAPDTFDAARVRDALIAVGLPDLA 480 Query: 481 ARLEEHAHWNRMLSLGEQQRLGIARALLHAPQFLFLDEATASLDEPAEAALYRLIAERLP 540 RL+E HWNRMLSLGEQQRLG+ARALLHAP +LFLDEATASLDEP+EA LYRL+ ERLP Sbjct: 481 ERLDEDGHWNRMLSLGEQQRLGLARALLHAPDYLFLDEATASLDEPSEARLYRLLTERLP 540 Query: 541 GTTVVSIGHRSTLDAFHQRNVTLVRDG 567 +VSIGHRSTLDAFH R VT+V+DG Sbjct: 541 QAAIVSIGHRSTLDAFHTRKVTMVKDG 567