BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0195.0013.p (403 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578397.1| protein of unknown function DUF224, cysteine-ri... 665 0.0 ref|YP_319184.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitroba... 661 0.0 ref|ZP_01045218.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitro... 649 0.0 ref|NP_774180.1| glycolate oxidase iron-sulfur subunit [Bradyrhi... 646 0.0 ref|YP_001207989.1| glycolate oxidase subunit, (Fe-S)protein, Gl... 639 0.0 >ref|YP_578397.1| protein of unknown function DUF224, cysteine-rich region [Nitrobacter hamburgensis X14] gb|ABE63937.1| protein of unknown function DUF224, cysteine-rich region [Nitrobacter hamburgensis X14] Length = 438 Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/438 (74%), Positives = 357/438 (81%), Gaps = 35/438 (7%) Query: 1 MKTEFSLAQLADPDIKEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE 60 MKTEF+ AQLADPDI EADKILR CVHCGFCTATCPTYVLLGDELDSPRGRIYLIK+MLE Sbjct: 1 MKTEFTPAQLADPDIVEADKILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKQMLE 60 Query: 61 KDKPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIERDYQRPLTERLLRSVL 120 K++PPTA+VVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIE++Y RPL ERLLR+VL Sbjct: 61 KNEPPTAEVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIEKEYVRPLPERLLRAVL 120 Query: 121 ALVLPRPGLFRISMILTGLVRPFAALLPTPSVGASSPGLLRRIKAMLAF----------- 169 A VLPRP +FR M+L L RP AALLP GA++P L RIKAMLA Sbjct: 121 AYVLPRPRVFRAGMVLARLGRPLAALLPGSKPGATTPTFLHRIKAMLALAPASLPAPGAR 180 Query: 170 ------------------------FFFXRINQAAINVLTRHGVEVVLVKDEQCCGALTHH 205 RINQAAI++LTRHGVEVVLV DEQCCGALTHH Sbjct: 181 AGSVFPAQGAKRGRVALLQGCAQQVLAPRINQAAISLLTRHGVEVVLVADEQCCGALTHH 240 Query: 206 MGQDGDALARARANITVWQREADQNGLDAILVTTSGCGTVVKDYGYLLREDKTFAEPAKR 265 MG D DALARARANIT W EA++ GLDAI+VT SGCGTV+KDYGYLLRED+ +A PA + Sbjct: 241 MGDDRDALARARANITTWIAEAERGGLDAIVVTASGCGTVIKDYGYLLREDRDYAGPAAK 300 Query: 266 ISALAKDITEYLAGLELAPSTQKGDITVAYHSACSLQHGQKITQLPKELLSKNGFVVKDV 325 IS L KDITEY+A L+L P + D+ +AYHSACSLQHGQKITQLPK+LLSKNGFVVKD+ Sbjct: 301 ISGLTKDITEYVASLDLPPPRSRSDLVIAYHSACSLQHGQKITQLPKDLLSKNGFVVKDI 360 Query: 326 PESHLCCGSAGTYNILQPDIASRLRDRKVANIALVKPDMIAAGNIGCMVQIAGGTSVPVV 385 PESHLCCGSAGTYNILQPDIA+RLRDRKVANIA VKPDMIAAGNIGCMVQIAGGTSVPVV Sbjct: 361 PESHLCCGSAGTYNILQPDIANRLRDRKVANIASVKPDMIAAGNIGCMVQIAGGTSVPVV 420 Query: 386 HTIELLDWATGGPRPGLN 403 HTIELLDWATGGPRPGLN Sbjct: 421 HTIELLDWATGGPRPGLN 438 >ref|YP_319184.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter winogradskyi Nb-255] gb|ABA05832.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter winogradskyi Nb-255] Length = 437 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/438 (74%), Positives = 359/438 (81%), Gaps = 36/438 (8%) Query: 1 MKTEFSLAQLADPDIKEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE 60 M+TEF+ AQL+DPDI EADKILR CVHCGFCTATCPTYVLLGDELDSPRGRIYLIK+MLE Sbjct: 1 MRTEFTPAQLSDPDIAEADKILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKQMLE 60 Query: 61 KDKPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIERDYQRPLTERLLRSVL 120 D+PPTA+VVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIE+DY RP++ERLLR+VL Sbjct: 61 HDEPPTAEVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIEKDYARPVSERLLRAVL 120 Query: 121 ALVLPRPGLFRISMILTGLVRPFAALLPTPSVGASSPGLLRRIKAMLAF----------- 169 A VLPRP +FR S+IL L RPFAALLP + G+ +P L RRIKAMLA Sbjct: 121 AFVLPRPKVFRASLILARLARPFAALLPG-AKGSVTPTLPRRIKAMLALAPASLPAPGAA 179 Query: 170 ------------------------FFFXRINQAAINVLTRHGVEVVLVKDEQCCGALTHH 205 RIN+AAI +LTRHGVEVVLV DEQCCGAL +H Sbjct: 180 AGRVFPATGKRRGRVALLQGCAQQVLAPRINEAAIRLLTRHGVEVVLVADEQCCGALAYH 239 Query: 206 MGQDGDALARARANITVWQREADQNGLDAILVTTSGCGTVVKDYGYLLREDKTFAEPAKR 265 MG D DALARARANI W REA++ GLDAIL+TTSGCGTV+KDYGYLLRED+ FA PA R Sbjct: 240 MGDDRDALARARANIKAWTREAERGGLDAILITTSGCGTVIKDYGYLLREDRDFAGPAAR 299 Query: 266 ISALAKDITEYLAGLELAPSTQKGDITVAYHSACSLQHGQKITQLPKELLSKNGFVVKDV 325 +S+LAKDITEY+A L+L S + ++ +AYHSACSLQHGQKITQLPK+LL KNGFVVKD+ Sbjct: 300 VSSLAKDITEYIASLDLPASGSRSELVIAYHSACSLQHGQKITQLPKDLLFKNGFVVKDI 359 Query: 326 PESHLCCGSAGTYNILQPDIASRLRDRKVANIALVKPDMIAAGNIGCMVQIAGGTSVPVV 385 PESHLCCGSAGTYNILQPDIA RLRDRKVANIA VKPDMIAAGNIGCM+QIAGGTSVPVV Sbjct: 360 PESHLCCGSAGTYNILQPDIADRLRDRKVANIASVKPDMIAAGNIGCMIQIAGGTSVPVV 419 Query: 386 HTIELLDWATGGPRPGLN 403 HTIELLDWATGGPRPGLN Sbjct: 420 HTIELLDWATGGPRPGLN 437 >ref|ZP_01045218.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] gb|EAQ36546.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] Length = 437 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/438 (73%), Positives = 352/438 (80%), Gaps = 36/438 (8%) Query: 1 MKTEFSLAQLADPDIKEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE 60 M+TEF+ AQL DPDI EADKILR CVHCGFCTATCPTYVLLGDELDSPRGRIYLIK MLE Sbjct: 1 MRTEFTPAQLRDPDIAEADKILRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLIKRMLE 60 Query: 61 KDKPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIERDYQRPLTERLLRSVL 120 ++PPTA+VVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIE++Y RPL+ERLLR+VL Sbjct: 61 NNEPPTAEVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIEKEYARPLSERLLRAVL 120 Query: 121 ALVLPRPGLFRISMILTGLVRPFAALLPTPSVGASSPGLLRRIKAMLAF----------- 169 A VLPRP +FR S+ L RPFAALLP GA+ P LLRRI+AMLA Sbjct: 121 AFVLPRPKVFRASLTLARFARPFAALLPGSKEGAT-PTLLRRIRAMLALAPASLPSPGAA 179 Query: 170 ------------------------FFFXRINQAAINVLTRHGVEVVLVKDEQCCGALTHH 205 RIN+AAI +LTRHGVEVVLV DE+CCGALTHH Sbjct: 180 AGSVFPATGMRRGRVALLQGCAQQVLAPRINEAAIRLLTRHGVEVVLVADERCCGALTHH 239 Query: 206 MGQDGDALARARANITVWQREADQNGLDAILVTTSGCGTVVKDYGYLLREDKTFAEPAKR 265 MG D DALA ARANI W REA++ GLDAILVTTSGCGTV+KDYGYLLRED+ FA PA + Sbjct: 240 MGDDRDALAHARANIRAWTREAERGGLDAILVTTSGCGTVIKDYGYLLREDRDFAGPAAK 299 Query: 266 ISALAKDITEYLAGLELAPSTQKGDITVAYHSACSLQHGQKITQLPKELLSKNGFVVKDV 325 +S+LAKDITEY+A L+L + ++ +AYHSACSLQHGQKI QLPK+LL KNGFVVKD+ Sbjct: 300 VSSLAKDITEYIASLDLPAPPSRSELVIAYHSACSLQHGQKIMQLPKDLLFKNGFVVKDI 359 Query: 326 PESHLCCGSAGTYNILQPDIASRLRDRKVANIALVKPDMIAAGNIGCMVQIAGGTSVPVV 385 PESHLCCGSAGTYNILQPDIA RLRDRKVANIA VKPDMIAAGNIGCM+QIAGGTSVPVV Sbjct: 360 PESHLCCGSAGTYNILQPDIADRLRDRKVANIASVKPDMIAAGNIGCMIQIAGGTSVPVV 419 Query: 386 HTIELLDWATGGPRPGLN 403 HTIELLDWATGGPRP LN Sbjct: 420 HTIELLDWATGGPRPELN 437 >ref|NP_774180.1| glycolate oxidase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC52805.1| glycolate oxidase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] Length = 440 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/438 (74%), Positives = 352/438 (80%), Gaps = 36/438 (8%) Query: 1 MKTEFSLAQLADPDIKEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE 60 MKTEFSLAQLADPDI EADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE Sbjct: 1 MKTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE 60 Query: 61 KDKPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIERDYQRPLTERLLRSVL 120 KD+ PTA+VVKH+DRCLSCLACMTTCPSGVNYMHLVDQARVRIE+ YQRPLTERLLR VL Sbjct: 61 KDQTPTAEVVKHVDRCLSCLACMTTCPSGVNYMHLVDQARVRIEQRYQRPLTERLLRQVL 120 Query: 121 ALVLPRPGLFRISMILTGLVRPFAALLPTPSVGASSPGLLRRIKAMLAF----------- 169 A VLP P FR SM L L RP A LPTP A+ PGL++R+KAMLA Sbjct: 121 AFVLPDPQRFRASMWLARLARPLAVFLPTPRPSAT-PGLVQRLKAMLALAPNRLPSPGPL 179 Query: 170 ------------------------FFFXRINQAAINVLTRHGVEVVLVKDEQCCGALTHH 205 RINQ+AI++LTRHG+EVVLV+DEQCCGALTHH Sbjct: 180 PGSVFAALGKKRGRVALLQGCAQQVLAPRINQSAISLLTRHGIEVVLVRDEQCCGALTHH 239 Query: 206 MGQDGDALARARANITVWQREADQNGLDAILVTTSGCGTVVKDYGYLLREDKTFAEPAKR 265 +G D DALARARANI W+ EA GLDAILVT SGCGTV+KDYGYLLRED FA A + Sbjct: 240 LGNDHDALARARANIAAWRAEAAGEGLDAILVTASGCGTVIKDYGYLLREDAAFAADAAK 299 Query: 266 ISALAKDITEYLAGLELAPSTQKGDITVAYHSACSLQHGQKITQLPKELLSKNGFVVKDV 325 +SALAKDITEY+AGL+LA + +I VAYHSACSLQHGQKIT LPKELLSKNGFVVKDV Sbjct: 300 VSALAKDITEYVAGLDLATTAIGDNIVVAYHSACSLQHGQKITGLPKELLSKNGFVVKDV 359 Query: 326 PESHLCCGSAGTYNILQPDIASRLRDRKVANIALVKPDMIAAGNIGCMVQIAGGTSVPVV 385 PESHLCCGSAGTYNILQP++A RLRDRKVANIA VKPDMIAAGNIGCMVQIA GTSVPVV Sbjct: 360 PESHLCCGSAGTYNILQPELAGRLRDRKVANIASVKPDMIAAGNIGCMVQIASGTSVPVV 419 Query: 386 HTIELLDWATGGPRPGLN 403 HTIELLDWATGG RP LN Sbjct: 420 HTIELLDWATGGARPALN 437 >ref|YP_001207989.1| glycolate oxidase subunit, (Fe-S)protein, GlcF [Bradyrhizobium sp. ORS 278] emb|CAL79774.1| Glycolate oxidase subunit, (Fe-S)protein, GlcF [Bradyrhizobium sp. ORS 278] Length = 439 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/439 (73%), Positives = 358/439 (81%), Gaps = 36/439 (8%) Query: 1 MKTEFSLAQLADPDIKEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE 60 MKTEF+LAQLADPDI ADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIK+MLE Sbjct: 1 MKTEFTLAQLADPDIAVADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKQMLE 60 Query: 61 KDKPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARVRIERDYQRPLTERLLRSVL 120 KD+ PT+DVVKHIDRCLSCL+CMTTCPSGV+YMHLVDQARVRIE YQRPLT+RLLR+VL Sbjct: 61 KDQAPTSDVVKHIDRCLSCLSCMTTCPSGVHYMHLVDQARVRIEETYQRPLTDRLLRAVL 120 Query: 121 ALVLPRPGLFRISMILTGLVRPFAALLPTPSVGASSPGLLRRIKAML------------- 167 A VLPRP LFR++M L L RPF ALLP S A +P L RR++AML Sbjct: 121 AYVLPRPQLFRLAMTLARLGRPFKALLPASSASAPTPSLWRRLRAMLELAPAAALPPPGP 180 Query: 168 ---AFF--------------------FFXRINQAAINVLTRHGVEVVLVKDEQCCGALTH 204 + F RINQAAINVLTRHG+EVVLVKDEQCCGALTH Sbjct: 181 SGGSVFPAQGARRGRVALLQGCAQAALAPRINQAAINVLTRHGIEVVLVKDEQCCGALTH 240 Query: 205 HMGQDGDALARARANITVWQREADQNGLDAILVTTSGCGTVVKDYGYLLREDKTFAEPAK 264 HMGQD DA+ARARAN+ VW EA + GLDAILVTTSGCGTV+KDYG++LRED FA PA Sbjct: 241 HMGQDDDAMARARANVGVWTAEASRGGLDAILVTTSGCGTVIKDYGHMLREDPQFAAPAA 300 Query: 265 RISALAKDITEYLAGLELAPSTQKGDITVAYHSACSLQHGQKITQLPKELLSKNGFVVKD 324 +SA+AKDI+EYLAGLEL + + ++VAYHSACSLQHGQKIT +PKELLSK+GFVVKD Sbjct: 301 AVSAMAKDISEYLAGLELKTTAESRGLSVAYHSACSLQHGQKITSIPKELLSKSGFVVKD 360 Query: 325 VPESHLCCGSAGTYNILQPDIASRLRDRKVANIALVKPDMIAAGNIGCMVQIAGGTSVPV 384 +PESHLCCGSAGTYNILQPDIA RLRDRKVANIA VKPD+IAAGNIGCM+QIA GT +PV Sbjct: 361 IPESHLCCGSAGTYNILQPDIAMRLRDRKVANIATVKPDVIAAGNIGCMMQIASGTGIPV 420 Query: 385 VHTIELLDWATGGPRPGLN 403 VHT+ELLDWATGGPRPGLN Sbjct: 421 VHTVELLDWATGGPRPGLN 439