BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0195.0004.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769463.1| hypothetical protein blr2823 [Bradyrhizobium ja...   193   6e-48
ref|YP_004522023.1| hypothetical protein JDM601_0769 [Mycobacter...    33   9.7  

>ref|NP_769463.1| hypothetical protein blr2823 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48088.1| blr2823 [Bradyrhizobium japonicum USDA 110]
          Length = 137

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/137 (70%), Positives = 112/137 (81%)

Query: 1   MHIKPIAIALLAMIAPGQARAAMLSDAEATFLDQLATAAAVLEQRCTGYEANGAGGVQTG 60
           M IK  A+ALL +I  G A+AA LS+AEATFLDQL TA+AVLEQRCTGYE +GAG VQ G
Sbjct: 1   MKIKLPAVALLVLIVSGPAQAATLSEAEATFLDQLVTASAVLEQRCTGYEVDGAGSVQLG 60

Query: 61  ARLLGSPDAAMAMINAFDAAIKAHDGNDYDPRKFRPEVSEAAGKTFKLVRAALITDPEGA 120
           ARLLGSPDAAMAMI+A+ AAIKAHDG  YDP KFRPEV+E+AG+TF+ VR  LI +P+ A
Sbjct: 61  ARLLGSPDAAMAMIDAYAAAIKAHDGESYDPGKFRPEVAESAGRTFRRVRTDLIRNPKRA 120

Query: 121 CAAYGESGAASGLLRRY 137
           CA +GE+  A GLLRRY
Sbjct: 121 CAGHGETSVARGLLRRY 137


>ref|YP_004522023.1| hypothetical protein JDM601_0769 [Mycobacterium sp. JDM601]
 gb|AEF34769.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
          Length = 849

 Score = 33.5 bits (75), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 41/93 (44%), Gaps = 12/93 (12%)

Query: 20  RAAMLSDAEATFLDQLATAAAVLEQRCTGYEANGAGGVQTGARLLGSP-DAAMAMINAFD 78
           R   LS  ++T  DQLA+A  +L       EAN A  +  GARLL    DAA      FD
Sbjct: 725 RPGELSLFDSTLTDQLASAKTLLVDVANASEANKA-EIDEGARLLAQARDAADTARRIFD 783

Query: 79  AAIKAHDGNDYDPRKF----------RPEVSEA 101
           AAI    G       F          RPEV+EA
Sbjct: 784 AAIAVRMGTLAPNTVFDEDSLLQMLARPEVAEA 816