BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0194.0029.p (225 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAQ57552.1| RhcC1 protein [Bradyrhizobium elkanii] 456 e-127 gb|AAG60794.1|AF322012_99 RhcC1 [Bradyrhizobium japonicum] 350 6e-95 ref|NP_768451.1| RhcC1 protein [Bradyrhizobium japonicum USDA 11... 350 9e-95 ref|NP_106861.1| nodulation protein NOLW [Mesorhizobium loti MAF... 297 1e-78 sp|P33212.1|NOLW_RHIFR RecName: Full=Nodulation protein nolW >gi... 282 3e-74 >emb|CAQ57552.1| RhcC1 protein [Bradyrhizobium elkanii] Length = 231 Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust. Identities = 225/225 (100%), Positives = 225/225 (100%) Query: 1 MVLKRILYAGGFICLGMVSALGAPLSLPSAPYSYTVLDQDLSAALQEFGNNLNIRVNVST 60 MVLKRILYAGGFICLGMVSALGAPLSLPSAPYSYTVLDQDLSAALQEFGNNLNIRVNVST Sbjct: 7 MVLKRILYAGGFICLGMVSALGAPLSLPSAPYSYTVLDQDLSAALQEFGNNLNIRVNVST 66 Query: 61 EVKGRIRGRMPDLPPREFLERLTNLYNLQWYYDGLVLYISAAHEAQSRLMVLSPISFDAF 120 EVKGRIRGRMPDLPPREFLERLTNLYNLQWYYDGLVLYISAAHEAQSRLMVLSPISFDAF Sbjct: 67 EVKGRIRGRMPDLPPREFLERLTNLYNLQWYYDGLVLYISAAHEAQSRLMVLSPISFDAF 126 Query: 121 KTALDALNISDERYIVKPAPGDGLVLASGPPRFIALVDQTLKGLVAEAQARRNPAAAEGP 180 KTALDALNISDERYIVKPAPGDGLVLASGPPRFIALVDQTLKGLVAEAQARRNPAAAEGP Sbjct: 127 KTALDALNISDERYIVKPAPGDGLVLASGPPRFIALVDQTLKGLVAEAQARRNPAAAEGP 186 Query: 181 PRDSVLMLFRGSSSVVIRDGRPEGHYSPDAPHQDGTVREAGTGQK 225 PRDSVLMLFRGSSSVVIRDGRPEGHYSPDAPHQDGTVREAGTGQK Sbjct: 187 PRDSVLMLFRGSSSVVIRDGRPEGHYSPDAPHQDGTVREAGTGQK 231 >gb|AAG60794.1|AF322012_99 RhcC1 [Bradyrhizobium japonicum] Length = 230 Score = 350 bits (899), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 177/224 (79%), Positives = 193/224 (86%), Gaps = 3/224 (1%) Query: 2 VLKRILYAGGFICLGMVSALGAPLSLPSAPYSYTVLDQDLSAALQEFGNNLNIRVNVSTE 61 +LKRI AG IC+G++ A LSLP APYSYTVLDQDL+AALQEFGNNLNIRVNVS + Sbjct: 10 ILKRIFCAGVLICVGILRTSAASLSLPPAPYSYTVLDQDLAAALQEFGNNLNIRVNVSAD 69 Query: 62 VKGRIRGRMPDLPPREFLERLTNLYNLQWYYDGLVLYISAAHEAQSRLMVLSPISFDAFK 121 V+GRIRGRMPDLPPREFL+RLT LYNLQWYYDGLVLYISAA EAQSRL+VL+PISFDA K Sbjct: 70 VRGRIRGRMPDLPPREFLDRLTALYNLQWYYDGLVLYISAAQEAQSRLIVLNPISFDALK 129 Query: 122 TALDALNISDERYIVKPAPGDGLVLASGPPRFIALVDQTLKGLVAEAQARRNPAAAEGPP 181 ALDALNISDERYIVKPAPG+GL+LASGPPRF+ALVDQTLKGLVAEAQARR+P AAE Sbjct: 130 AALDALNISDERYIVKPAPGEGLILASGPPRFVALVDQTLKGLVAEAQARRSP-AAERSQ 188 Query: 182 RDSVLMLFRGSSSVVIRDGRPEGHYSPDAPHQDGTVREAGTGQK 225 +SVLMLFRGSSS V RDGRPE SP+ P G VREAG GQK Sbjct: 189 HESVLMLFRGSSSTVFRDGRPEA--SPETPLHGGAVREAGPGQK 230 >ref|NP_768451.1| RhcC1 protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47076.1| RhcC1 protein [Bradyrhizobium japonicum USDA 110] Length = 237 Score = 350 bits (898), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 177/224 (79%), Positives = 193/224 (86%), Gaps = 3/224 (1%) Query: 2 VLKRILYAGGFICLGMVSALGAPLSLPSAPYSYTVLDQDLSAALQEFGNNLNIRVNVSTE 61 +LKRI AG IC+G++ A LSLP APYSYTVLDQDL+AALQEFGNNLNIRVNVS + Sbjct: 17 ILKRIFCAGVLICVGILRTSAASLSLPPAPYSYTVLDQDLAAALQEFGNNLNIRVNVSAD 76 Query: 62 VKGRIRGRMPDLPPREFLERLTNLYNLQWYYDGLVLYISAAHEAQSRLMVLSPISFDAFK 121 V+GRIRGRMPDLPPREFL+RLT LYNLQWYYDGLVLYISAA EAQSRL+VL+PISFDA K Sbjct: 77 VRGRIRGRMPDLPPREFLDRLTALYNLQWYYDGLVLYISAAQEAQSRLIVLNPISFDALK 136 Query: 122 TALDALNISDERYIVKPAPGDGLVLASGPPRFIALVDQTLKGLVAEAQARRNPAAAEGPP 181 ALDALNISDERYIVKPAPG+GL+LASGPPRF+ALVDQTLKGLVAEAQARR+P AAE Sbjct: 137 AALDALNISDERYIVKPAPGEGLILASGPPRFVALVDQTLKGLVAEAQARRSP-AAERSQ 195 Query: 182 RDSVLMLFRGSSSVVIRDGRPEGHYSPDAPHQDGTVREAGTGQK 225 +SVLMLFRGSSS V RDGRPE SP+ P G VREAG GQK Sbjct: 196 HESVLMLFRGSSSTVFRDGRPEA--SPETPLHGGAVREAGPGQK 237 >ref|NP_106861.1| nodulation protein NOLW [Mesorhizobium loti MAFF303099] dbj|BAB52647.1| nodulation protein; NolW [Mesorhizobium loti MAFF303099] Length = 220 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 143/211 (67%), Positives = 166/211 (78%), Gaps = 2/211 (0%) Query: 5 RILYAGGFICLGMVSALGAPLSLPSAPYSYTVLDQDLSAALQEFGNNLNIRVNVSTEVKG 64 R+L AG F+ G LG PLSL PY YTVLDQD+S ALQ+FGNNLNIRVN+S EVKG Sbjct: 2 RLLCAGFFLSAGTNGTLGVPLSLSKTPYRYTVLDQDISEALQQFGNNLNIRVNISAEVKG 61 Query: 65 RIRGRMPDLPPREFLERLTNLYNLQWYYDGLVLYISAAHEAQSRLMVLSPISFDAFKTAL 124 RIRG MPDLPPREFL+RL N+Y LQWYYDGLVLY+SAA E+Q+R++VL+ I FD FK AL Sbjct: 62 RIRGSMPDLPPREFLDRLANMYGLQWYYDGLVLYVSAAKESQTRMLVLTSIRFDTFKGAL 121 Query: 125 DALNISDERYIVKPAPGDGLVLASGPPRFIALVDQTLKGLVAEAQARRNPAAAEGPPRDS 184 D L ISD+RY+V+PAPGDGLVL SGPPRF ALV+QT GLVAEAQ + P E P +S Sbjct: 122 DKLEISDDRYVVRPAPGDGLVLVSGPPRFTALVEQTFNGLVAEAQGQ--PRVHETPTSES 179 Query: 185 VLMLFRGSSSVVIRDGRPEGHYSPDAPHQDG 215 VL LFRGSS++V+R+G PE YS D P QDG Sbjct: 180 VLTLFRGSSTMVVRNGLPEAAYSSDVPQQDG 210 >sp|P33212.1|NOLW_RHIFR RecName: Full=Nodulation protein nolW gb|AAB17675.1| nodulation protein [Sinorhizobium fredii] gb|AAL98690.1| NolW [Sinorhizobium fredii] gb|AAU85364.1| nodulation protein [Sinorhizobium fredii] Length = 234 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 139/214 (64%), Positives = 172/214 (80%), Gaps = 3/214 (1%) Query: 2 VLKRILYAGGFICLGMVSALGAPLSLPSAPYSYTVLDQDLSAALQEFGNNLNIRVNVSTE 61 + +R+L G F+ G+ + LGA L LPS Y YTVLDQDLSAALQEFGNNL I VN+S E Sbjct: 13 MFRRLLCVGLFLFAGIHTTLGATLPLPSTSYKYTVLDQDLSAALQEFGNNLKISVNISAE 72 Query: 62 VKGRIRGRMPDLPPREFLERLTNLYNLQWYYDGLVLYISAAHEAQSRLMVLSPISFDAFK 121 VKGRIRGR+P+L PREFL+RLT+LY+LQWYYDG+VLY+SAA EAQ+R++VLS + F AFK Sbjct: 73 VKGRIRGRIPELSPREFLDRLTDLYDLQWYYDGVVLYVSAAKEAQTRMLVLSSVHFSAFK 132 Query: 122 TALDALNISDERYIVKPAPGDGLVLASGPPRFIALVDQTLKGLVAEAQARRNPAAAEGPP 181 ALD L+ISDERY V+PAPG+GLVL SGPPRFIAL++QTL GL+A AQA+ P A + P Sbjct: 133 LALDKLDISDERYPVRPAPGNGLVLVSGPPRFIALIEQTLNGLLAVAQAQ--PRATDTPA 190 Query: 182 RDSVLMLFRGSSSVVIRDGRPEGHYSPDA-PHQD 214 R+SV++LFRGSS+ V+R GRPE Y+ + P D Sbjct: 191 RESVMVLFRGSSTTVVRGGRPEVFYTSEMLPEND 224