BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0194.0013.p         (42 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768480.1| hypothetical protein bll1840 [Bradyrhizobium ja...    47   7e-04

>ref|NP_768480.1| hypothetical protein bll1840 [Bradyrhizobium japonicum USDA 110]
 gb|AAG60824.1|AF322012_129 ID274 [Bradyrhizobium japonicum]
 dbj|BAC47105.1| bll1840 [Bradyrhizobium japonicum USDA 110]
          Length = 771

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 1/43 (2%)

Query: 1   VQSFLQEELFDAVTWRPSPR-PNFVPENYFGRMMDQGAAAQTT 42
            QS  QE  FDA  W PS R P+F  E++ G+MM++GAAAQTT
Sbjct: 446 AQSVAQEAPFDAPAWHPSLRQPDFASEDHSGQMMNEGAAAQTT 488