BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0194.0001.p         (118 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774822.1| transposase [Bradyrhizobium japonicum USDA 110]...   177   4e-43
ref|NP_769117.1| transposase [Bradyrhizobium japonicum USDA 110]...   175   2e-42
ref|NP_107360.1| transposase [Mesorhizobium loti MAFF303099] >gi...   164   3e-39
ref|NP_103854.1| hypothetical protein mll2531 [Mesorhizobium lot...   164   4e-39
ref|NP_108276.1| hypothetical protein mll8100 [Mesorhizobium lot...   162   1e-38

>ref|NP_774822.1| transposase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53447.1| bll8182 [Bradyrhizobium japonicum USDA 110]
          Length = 254

 Score =  177 bits (450), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/101 (83%), Positives = 87/101 (86%)

Query: 1   MRYELADYEWIAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPAAFGPYTTCY 60
           MRYEL DYEW  IKPMLPNK RGVPRVNDRRVLNGIFWVLRSGAPWRDLP  FGPYTTCY
Sbjct: 1   MRYELTDYEWSVIKPMLPNKSRGVPRVNDRRVLNGIFWVLRSGAPWRDLPENFGPYTTCY 60

Query: 61  NRFVRWRRADVWSRIMDALAAAHDAAVQMIDNSIVRGINMG 101
           NRFVRWRRA VW+++M ALA AHDAAVQMID SIVR    G
Sbjct: 61  NRFVRWRRAGVWAKLMSALAGAHDAAVQMIDTSIVRVHQHG 101


>ref|NP_769117.1| transposase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47742.1| blr2477 [Bradyrhizobium japonicum USDA 110]
          Length = 284

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/116 (71%), Positives = 92/116 (79%), Gaps = 1/116 (0%)

Query: 1   MRYELADYEWIAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPAAFGPYTTCY 60
           MRYEL D+EW AI+P LPNKPRGVPRVNDRRVLNGIFW+LRSGAPWRDLP +FGPYTTCY
Sbjct: 32  MRYELTDFEWAAIRPFLPNKPRGVPRVNDRRVLNGIFWILRSGAPWRDLPESFGPYTTCY 91

Query: 61  NRFVRWRRADVWSRIMDALAAAHDAAVQMIDNSIVRGINMGPASQGTSAYRWEGRA 116
           NRFVRWR A +W  IM ALA AHD +VQMID SIVR ++      G S  R  GR+
Sbjct: 92  NRFVRWRMAGIWDLIMKALAEAHDGSVQMIDTSIVR-VHQHGGCAGGSEKRLMGRS 146


>ref|NP_107360.1| transposase [Mesorhizobium loti MAFF303099]
 ref|NP_107161.1| transposase [Mesorhizobium loti MAFF303099]
 ref|NP_106594.1| transposase [Mesorhizobium loti MAFF303099]
 ref|NP_106524.1| transposase [Mesorhizobium loti MAFF303099]
 ref|NP_085635.1| transposase [Mesorhizobium loti MAFF303099]
 dbj|BAB52310.1| transposase [Mesorhizobium loti MAFF303099]
 dbj|BAB52380.1| transposase [Mesorhizobium loti MAFF303099]
 dbj|BAB52947.1| transposase [Mesorhizobium loti MAFF303099]
 dbj|BAB53146.1| transposase [Mesorhizobium loti MAFF303099]
 dbj|BAB54476.1| transposase [Mesorhizobium loti MAFF303099]
          Length = 120

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 75/104 (72%), Positives = 86/104 (82%)

Query: 2   RYELADYEWIAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPAAFGPYTTCYN 61
           RY+L D+EW AI+P+LPNKPRGVPRV+DRRVLNGIFWVLRSGAPWRDLP  +GP TTCYN
Sbjct: 3   RYDLTDFEWRAIEPLLPNKPRGVPRVDDRRVLNGIFWVLRSGAPWRDLPERYGPRTTCYN 62

Query: 62  RFVRWRRADVWSRIMDALAAAHDAAVQMIDNSIVRGINMGPASQ 105
           RFVRWR+A VW R+MDA+  AHD  VQMID SIVR    G  ++
Sbjct: 63  RFVRWRKAGVWDRLMDAITKAHDGTVQMIDTSIVRVHQQGATAK 106


>ref|NP_103854.1| hypothetical protein mll2531 [Mesorhizobium loti MAFF303099]
 dbj|BAB49640.1| mll2531 [Mesorhizobium loti MAFF303099]
          Length = 158

 Score =  164 bits (415), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 74/86 (86%), Positives = 79/86 (91%)

Query: 1  MRYELADYEWIAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPAAFGPYTTCY 60
          MRYEL D+EW AIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLP AFGPYTTCY
Sbjct: 1  MRYELTDHEWTAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPTAFGPYTTCY 60

Query: 61 NRFVRWRRADVWSRIMDALAAAHDAA 86
          NRFVRWRRA VW R+++ALA AHD +
Sbjct: 61 NRFVRWRRAGVWGRMIEALATAHDGS 86


>ref|NP_108276.1| hypothetical protein mll8100 [Mesorhizobium loti MAFF303099]
 dbj|BAB53737.1| mll8100 [Mesorhizobium loti MAFF303099]
          Length = 254

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 83/96 (86%)

Query: 2  RYELADYEWIAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPAAFGPYTTCYN 61
          RY+L+D+EW  IKP+LPNKPRGVPRV+DRRV+NGIFWVLRSGAPWRDLP  +GP TTCYN
Sbjct: 3  RYDLSDFEWHVIKPLLPNKPRGVPRVDDRRVMNGIFWVLRSGAPWRDLPERYGPRTTCYN 62

Query: 62 RFVRWRRADVWSRIMDALAAAHDAAVQMIDNSIVRG 97
          RFVRWR+A VW R+MDA+ A HD  +QMID++ VR 
Sbjct: 63 RFVRWRKASVWDRLMDAITAVHDGDIQMIDSTSVRA 98