BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0098.p (402 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08628922.1| branched-chain amino acid ABC transporter ami... 648 0.0 ref|ZP_08407423.1| extracellular ligand-binding receptor [Hylemo... 520 e-145 ref|ZP_06684920.1| ABC superfamily ATP binding cassette transpor... 519 e-145 gb|EFV82026.1| twin-arginine translocation pathway signal [Achro... 517 e-144 ref|YP_001189316.1| extracellular ligand-binding receptor [Pseud... 508 e-142 >ref|ZP_08628922.1| branched-chain amino acid ABC transporter amino acid-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08281.1| branched-chain amino acid ABC transporter amino acid-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 402 Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/401 (79%), Positives = 350/401 (87%) Query: 1 MNFRSIVSSGPARRWPAWHAAATILLAALPFTSGARAAEPIKIGLVTALSGQSARAGEAL 60 M + S S+ R + AA S A AAEPIKIGLVTALSGQSARAGEAL Sbjct: 1 MRYNSTSSNRAFSRPSFLRGMMGVAFAATLSVSAAHAAEPIKIGLVTALSGQSARAGEAL 60 Query: 61 TRGATIAIEEINAKGGVLGRPLELVRRDDESNPAKGLIAARELIQREKVAVLVGGLDTPV 120 TRGATIAI+EINAKGGVLGR LELVRRDDESNPAKGLIAARELIQREKV+ ++GGLDTPV Sbjct: 61 TRGATIAIDEINAKGGVLGRQLELVRRDDESNPAKGLIAARELIQREKVSAVLGGLDTPV 120 Query: 121 ELAIVPFVNNVKVPFVVPWAAGTNITRNGAPSNYVFRVSAMDDEVDKAIVQFSRKTYNAK 180 LAIVPFVNN K+PFVVPWAAGTNIT+NGA NYVFRVSA D EVDKAIVQF+RKTY K Sbjct: 121 ALAIVPFVNNSKMPFVVPWAAGTNITQNGAADNYVFRVSAKDSEVDKAIVQFARKTYGTK 180 Query: 181 KPGLILVNNPWGESNEHGLKAALKAAGIEPAGVEKFEGNDVDVVSQLSRLKQAGADTLYL 240 KPGLILVNNPWGESNEHGLK A+K AGIEPAG+EKFEGNDVDVV QLSRLKQAGADTL+L Sbjct: 181 KPGLILVNNPWGESNEHGLKDAMKEAGIEPAGIEKFEGNDVDVVPQLSRLKQAGADTLFL 240 Query: 241 VGNVGPSSQVVKSLDRMGWAPPIVSHWGPAGGRFTELAGPSAENVIFVQTYSFFGNLSPV 300 VGNVGP+SQVVKSLDRMGWAPPIVSHWGPAGGRFTELAGP+A+NVIFVQTYSFFG+LSPV Sbjct: 241 VGNVGPASQVVKSLDRMGWAPPIVSHWGPAGGRFTELAGPNAKNVIFVQTYSFFGDLSPV 300 Query: 301 GKRVMSALQAKYSDIKGPADVTPAVGVANAYDSILVIARAIEKAGGTEPTAVRDGFYAID 360 GK+VM+ALQAKY DIKGPADVTPAVGVANAYDS+LVIARAIEKA +P A+R+G Y +D Sbjct: 301 GKKVMAALQAKYPDIKGPADVTPAVGVANAYDSVLVIARAIEKAKSADPAAIRNGLYEVD 360 Query: 361 RVDGLIKTYEKPFAQDKHDALTAGDYIWARFEDNHIMPFAR 401 +V+GLIKTY+KPF + +HDAL+ DYIW RFEDNHIMP A+ Sbjct: 361 QVNGLIKTYDKPFTKTRHDALSEKDYIWTRFEDNHIMPVAQ 401 >ref|ZP_08407423.1| extracellular ligand-binding receptor [Hylemonella gracilis ATCC 19624] gb|EGI75452.1| extracellular ligand-binding receptor [Hylemonella gracilis ATCC 19624] Length = 397 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 252/365 (69%), Positives = 303/365 (83%), Gaps = 1/365 (0%) Query: 39 EPIKIGLVTALSGQSARAGEALTRGATIAIEEINAKGGVLG-RPLELVRRDDESNPAKGL 97 EPIKIGLVTALSGQSA AGEA+TRG +AI+EINAKGG+LG R LELVRRDDE+NPAKG+ Sbjct: 33 EPIKIGLVTALSGQSALAGEAITRGMQLAIDEINAKGGLLGGRKLELVRRDDEANPAKGV 92 Query: 98 IAARELIQREKVAVLVGGLDTPVELAIVPFVNNVKVPFVVPWAAGTNITRNGAPSNYVFR 157 +AARELI REKVAV+ GGLDTPV +AIVP +N KVPF+ PWAAGT IT+NGA N+ FR Sbjct: 93 VAARELIYREKVAVIFGGLDTPVSMAIVPLINQEKVPFMGPWAAGTGITKNGANPNFAFR 152 Query: 158 VSAMDDEVDKAIVQFSRKTYNAKKPGLILVNNPWGESNEHGLKAALKAAGIEPAGVEKFE 217 VSA+D+ VD ++ +++KT+ KPGLILVNNPWGESNE GLKAA+ A G+ P G+EK+E Sbjct: 153 VSAVDEIVDVGMLAYAQKTFKTAKPGLILVNNPWGESNEKGLKAAMAAKGVTPVGIEKYE 212 Query: 218 GNDVDVVSQLSRLKQAGADTLYLVGNVGPSSQVVKSLDRMGWAPPIVSHWGPAGGRFTEL 277 NDVD+V QL+RLK AGADTL+LVGNVGPS+QVVKSL+RMGW P+VSHWGPAGGRFTEL Sbjct: 213 ANDVDMVPQLTRLKAAGADTLFLVGNVGPSAQVVKSLERMGWKVPVVSHWGPAGGRFTEL 272 Query: 278 AGPSAENVIFVQTYSFFGNLSPVGKRVMSALQAKYSDIKGPADVTPAVGVANAYDSILVI 337 AGP+A++V FVQTYSFFG SPVG+RV+ A+ AKY ++KGP D+TPAVGVANAYD + + Sbjct: 273 AGPNAKDVHFVQTYSFFGKQSPVGERVIKAMMAKYPNVKGPGDITPAVGVANAYDGVHLA 332 Query: 338 ARAIEKAGGTEPTAVRDGFYAIDRVDGLIKTYEKPFAQDKHDALTAGDYIWARFEDNHIM 397 A AI+ AG TE AVR GFY I + +GLIKTY KPF+ + HDA+ A DY+WA+F DN I+ Sbjct: 333 ALAIQAAGSTEGDAVRQGFYKIGKYEGLIKTYNKPFSPEVHDAVLADDYVWAQFIDNRIV 392 Query: 398 PFARN 402 P N Sbjct: 393 PVGLN 397 >ref|ZP_06684920.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gb|EFF78271.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 421 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 268/389 (68%), Positives = 307/389 (78%), Gaps = 1/389 (0%) Query: 11 PARRWPAWHAAATILLAALPFTSGARAAEPIKIGLVTALSGQSARAGEALTRGATIAIEE 70 P RR A A L +A A AA+PIKIGL+TALSG+SARAGEALTRG TIAI+E Sbjct: 28 PTRRSFLLRATAAALFSAGFALQPALAADPIKIGLITALSGESARAGEALTRGMTIAIDE 87 Query: 71 INAKGGVL-GRPLELVRRDDESNPAKGLIAARELIQREKVAVLVGGLDTPVELAIVPFVN 129 INAKGG+L GR + LVRRDDE NPAKG+ AARELI +EKVAVL GGLDTPV +AIVP VN Sbjct: 88 INAKGGLLDGRQVVLVRRDDEGNPAKGMAAARELIFKEKVAVLFGGLDTPVSMAIVPIVN 147 Query: 130 NVKVPFVVPWAAGTNITRNGAPSNYVFRVSAMDDEVDKAIVQFSRKTYNAKKPGLILVNN 189 KVPF+ PWAAGT IT+N N+VFRVSAMD+ VD A+VQ+++KT+ KPGLILVNN Sbjct: 148 QEKVPFMGPWAAGTAITQNKGNPNFVFRVSAMDEIVDSAMVQYAQKTFQTAKPGLILVNN 207 Query: 190 PWGESNEHGLKAALKAAGIEPAGVEKFEGNDVDVVSQLSRLKQAGADTLYLVGNVGPSSQ 249 PWGESNE GL AAL +A + AG EKF+ ND+DVV QLSRLK AGADTL+LVGNVGPS+Q Sbjct: 208 PWGESNEKGLNAALASAKLTAAGTEKFQPNDLDVVPQLSRLKAAGADTLFLVGNVGPSAQ 267 Query: 250 VVKSLDRMGWAPPIVSHWGPAGGRFTELAGPSAENVIFVQTYSFFGNLSPVGKRVMSALQ 309 VVKSLDRMGW PIVSHWGPAGGRFTELAGP+A+NV FVQTYSFFG PVG +VM AL+ Sbjct: 268 VVKSLDRMGWKVPIVSHWGPAGGRFTELAGPNAKNVHFVQTYSFFGKQGPVGDKVMQALK 327 Query: 310 AKYSDIKGPADVTPAVGVANAYDSILVIARAIEKAGGTEPTAVRDGFYAIDRVDGLIKTY 369 KYSDIKGP D+TPAVGVANAYD + + A AI +AG T+ AVR GFY I + DGLIKTY Sbjct: 328 TKYSDIKGPQDITPAVGVANAYDGMQLAALAIAQAGSTDGDAVRQGFYKIGKYDGLIKTY 387 Query: 370 EKPFAQDKHDALTAGDYIWARFEDNHIMP 398 E+PF HDAL DY+W +F DN I+P Sbjct: 388 EQPFTPTSHDALRENDYVWTQFIDNRILP 416 >gb|EFV82026.1| twin-arginine translocation pathway signal [Achromobacter xylosoxidans C54] Length = 396 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 261/365 (71%), Positives = 300/365 (82%), Gaps = 1/365 (0%) Query: 35 ARAAEPIKIGLVTALSGQSARAGEALTRGATIAIEEINAKGGVLG-RPLELVRRDDESNP 93 A AA+PIKIGL+TALSG+SARAGEALTRG T+AI+EINAKGG+LG R + LVRRDDE NP Sbjct: 27 ALAADPIKIGLITALSGESARAGEALTRGMTVAIDEINAKGGLLGGRQVVLVRRDDEGNP 86 Query: 94 AKGLIAARELIQREKVAVLVGGLDTPVELAIVPFVNNVKVPFVVPWAAGTNITRNGAPSN 153 AKG+ AARELI +EKVAVL GGLDTPV +AIVP VN KVPF+ PWAAGT IT N N Sbjct: 87 AKGMAAARELIYKEKVAVLFGGLDTPVSMAIVPIVNQEKVPFMGPWAAGTAITHNKGNPN 146 Query: 154 YVFRVSAMDDEVDKAIVQFSRKTYNAKKPGLILVNNPWGESNEHGLKAALKAAGIEPAGV 213 +VFRVSAMD+ VD A+VQ++RKT+ + KPG+ILVNNPWGESNE GL AAL AA I PAGV Sbjct: 147 FVFRVSAMDEIVDSAMVQYARKTFQSAKPGMILVNNPWGESNEKGLDAALAAAKITPAGV 206 Query: 214 EKFEGNDVDVVSQLSRLKQAGADTLYLVGNVGPSSQVVKSLDRMGWAPPIVSHWGPAGGR 273 EKF+ D+DV QLSRLK AGADTL+LVGNVGPS+QVVKSLDRMGW P+VSHWGPAGGR Sbjct: 207 EKFQPADLDVTPQLSRLKAAGADTLFLVGNVGPSAQVVKSLDRMGWKVPVVSHWGPAGGR 266 Query: 274 FTELAGPSAENVIFVQTYSFFGNLSPVGKRVMSALQAKYSDIKGPADVTPAVGVANAYDS 333 FTELAGP+A+NV FVQTYSFFG PVG++VM AL+AKYSDIKGP D+TPAVGVANAYD Sbjct: 267 FTELAGPNAKNVHFVQTYSFFGKQGPVGEKVMQALKAKYSDIKGPQDITPAVGVANAYDG 326 Query: 334 ILVIARAIEKAGGTEPTAVRDGFYAIDRVDGLIKTYEKPFAQDKHDALTAGDYIWARFED 393 + + A AI +AG T+ AVR GFY I + +GLIKTYE+PF HDAL DY+W F D Sbjct: 327 MQLAALAIAQAGSTDGDAVRQGFYKIGKYEGLIKTYEQPFTPASHDALREDDYVWTHFVD 386 Query: 394 NHIMP 398 N I+P Sbjct: 387 NRILP 391 >ref|YP_001189316.1| extracellular ligand-binding receptor [Pseudomonas mendocina ymp] gb|ABP86584.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Pseudomonas mendocina ymp] Length = 395 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 253/395 (64%), Positives = 311/395 (78%), Gaps = 3/395 (0%) Query: 5 SIVSSGPARRWPAWHAAATILLAALPFTSGARAAEPIKIGLVTALSGQSARAGEALTRGA 64 S + S P R P AA + + F+ A+AAEPIK+GLV ALSGQSA++GEALTRG Sbjct: 2 STLLSFPRRLKPCLAAAFAL---SCWFSLSAQAAEPIKVGLVAALSGQSAKSGEALTRGL 58 Query: 65 TIAIEEINAKGGVLGRPLELVRRDDESNPAKGLIAARELIQREKVAVLVGGLDTPVELAI 124 TIAI+E+NA+GGVLGRPL+LVRRDDESNP+KGL+AARELIQREKVAVL GGLDTPV LAI Sbjct: 59 TIAIDEVNAQGGVLGRPLQLVRRDDESNPSKGLLAARELIQREKVAVLFGGLDTPVSLAI 118 Query: 125 VPFVNNVKVPFVVPWAAGTNITRNGAPSNYVFRVSAMDDEVDKAIVQFSRKTYNAKKPGL 184 VP N +K+PF+ WAAGT ITRNGA NYVFRVSA+D+ VD+A+V +++K + +KPG+ Sbjct: 119 VPLANQMKMPFMGVWAAGTPITRNGAADNYVFRVSAVDELVDEALVSYAQKHFATQKPGM 178 Query: 185 ILVNNPWGESNEHGLKAALKAAGIEPAGVEKFEGNDVDVVSQLSRLKQAGADTLYLVGNV 244 IL+NNPWGESNE G + AL A G+ AGVE+ EG+D+DVV QLSRLKQAGADTL LV NV Sbjct: 179 ILINNPWGESNEQGFRKALAARGMPVAGVERIEGSDLDVVPQLSRLKQAGADTLLLVANV 238 Query: 245 GPSSQVVKSLDRMGWAPPIVSHWGPAGGRFTELAGPSAENVIFVQTYSFFGNLSPVGKRV 304 PS+QVVKSLDRMGW P+VSHWGPAGGRF ELAGP+A V F+QTY+F G+ + Sbjct: 239 APSAQVVKSLDRMGWDVPVVSHWGPAGGRFGELAGPNAGRVHFIQTYTFSQEGDARGEAI 298 Query: 305 MSALQAKYSDIKGPADVTPAVGVANAYDSILVIARAIEKAGGTEPTAVRDGFYAIDRVDG 364 +ALQ +Y +IK ADVTPAVG+ANAYD++ + A+AI AG TE A+RDG+Y I R +G Sbjct: 299 FAALQKRYPEIKSLADVTPAVGIANAYDALHLTAQAIAAAGSTEGPAIRDGYYGIQRYEG 358 Query: 365 LIKTYEKPFAQDKHDALTAGDYIWARFEDNHIMPF 399 LIKTYEKPF+ ++HDAL DY++ RFE + I+P Sbjct: 359 LIKTYEKPFSAEQHDALGVDDYVFTRFEGDEIVPI 393