BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0084.p (278 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768911.1| sugar ABC transporter permease protein [Bradyrh... 403 e-110 ref|ZP_06896958.1| ribose ABC superfamily ATP binding cassette t... 317 1e-84 ref|YP_001980125.1| sugar ABC transporter permease [Rhizobium et... 291 8e-77 ref|YP_002278595.1| monosaccharide-transporting ATPase [Rhizobiu... 290 1e-76 gb|EGE60471.1| putative sugar ABC transporter, permease protein ... 289 3e-76 >ref|NP_768911.1| sugar ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47536.1| sugar ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 352 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/259 (91%), Positives = 246/259 (94%) Query: 1 MMKKELGLFLLLAVISAITGAINPAFLSFVNLLNMANLIGLFGVFALGEGLVIITGGIDL 60 M+KKELGL LLL VISAITG INPAFLS VNLLNMANLIGLFGVFALGEGLVIITGGIDL Sbjct: 1 MIKKELGLGLLLVVISAITGLINPAFLSLVNLLNMANLIGLFGVFALGEGLVIITGGIDL 60 Query: 61 SLGSMFALLGVIFIDLLTTYHVPWPLALLLVLMGGLALGGIQGFLITRLKMQPFIVTLCG 120 SLGSMFALLGVIFIDLLTT+ V WPLALL VL+GGL LG IQG L+TRLKMQPFIVTLCG Sbjct: 61 SLGSMFALLGVIFIDLLTTHQVHWPLALLAVLLGGLVLGAIQGLLVTRLKMQPFIVTLCG 120 Query: 121 LLIYRGAARYYTSDSTRGFGYGDEASTLSSIASGNIAGIPNTFIFLIILALILGVLLHRS 180 LLIYRGAARYYTSDSTRGFGYGDEA TLS+IASGN+AGIPNTFI LI+LAL+LGVLLHRS Sbjct: 121 LLIYRGAARYYTSDSTRGFGYGDEAGTLSNIASGNLAGIPNTFILLIVLALVLGVLLHRS 180 Query: 181 VYGRWLYAVGKNEEAARFSGIKTNLVIATAYVISGGLAGVSTVMFVFYTNSVSPSSFGNF 240 VYGRWLYAVGKNEEAARFSGI TNLVIATAY+ISGGLAGVSTV+FVFYTNSVSPSSFGNF Sbjct: 181 VYGRWLYAVGKNEEAARFSGINTNLVIATAYIISGGLAGVSTVLFVFYTNSVSPSSFGNF 240 Query: 241 YELYAIAAAVLGGCSLRGG 259 YELYAIAAAVLGGCSLRGG Sbjct: 241 YELYAIAAAVLGGCSLRGG 259 >ref|ZP_06896958.1| ribose ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gb|EFH11344.1| ribose ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 318 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 181/259 (69%), Positives = 215/259 (83%) Query: 1 MMKKELGLFLLLAVISAITGAINPAFLSFVNLLNMANLIGLFGVFALGEGLVIITGGIDL 60 M +K+LGL LL VI AIT +NP FLS VNLLNMANLIGLFG+F++G+GL+IITGGIDL Sbjct: 1 MSRKDLGLAALLIVIGAITAVLNPLFLSTVNLLNMANLIGLFGIFSIGQGLIIITGGIDL 60 Query: 61 SLGSMFALLGVIFIDLLTTYHVPWPLALLLVLMGGLALGGIQGFLITRLKMQPFIVTLCG 120 S+G+MFALLGVIF+DLL Y + WP A+L+VL GL LG + G L+TRL MQPF+VTLCG Sbjct: 61 SVGAMFALLGVIFVDLLVNYEIFWPYAVLIVLGLGLLLGALHGLLVTRLGMQPFVVTLCG 120 Query: 121 LLIYRGAARYYTSDSTRGFGYGDEASTLSSIASGNIAGIPNTFIFLIILALILGVLLHRS 180 LLIYRGAARYYT D T GFGY + L+ +ASG GIP+ FI LI++A+I+GVLLHRS Sbjct: 121 LLIYRGAARYYTQDGTMGFGYAGDLDMLTWLASGRSFGIPHPFIALIVVAVIVGVLLHRS 180 Query: 181 VYGRWLYAVGKNEEAARFSGIKTNLVIATAYVISGGLAGVSTVMFVFYTNSVSPSSFGNF 240 V+GR+LYAVG+NEEAAR SGI T V+ AY++ G LAG+STV+ VFYT+SVSPSSFGNF Sbjct: 181 VFGRYLYAVGRNEEAARHSGIDTRAVVIGAYLLGGLLAGLSTVLLVFYTSSVSPSSFGNF 240 Query: 241 YELYAIAAAVLGGCSLRGG 259 YELYAIAAAVLGGCSLRGG Sbjct: 241 YELYAIAAAVLGGCSLRGG 259 >ref|YP_001980125.1| sugar ABC transporter permease [Rhizobium etli CIAT 652] gb|ACE92947.1| probable sugar ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 343 Score = 291 bits (745), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 152/259 (58%), Positives = 199/259 (76%) Query: 1 MMKKELGLFLLLAVISAITGAINPAFLSFVNLLNMANLIGLFGVFALGEGLVIITGGIDL 60 M+KK+LGL LL+ V+ + INP FL +NL N ANLIGLFG+ ++G+ VIITGGI+L Sbjct: 1 MIKKDLGLLLLIVVVGIVVAIINPRFLLPINLANTANLIGLFGILSIGQAYVIITGGIEL 60 Query: 61 SLGSMFALLGVIFIDLLTTYHVPWPLALLLVLMGGLALGGIQGFLITRLKMQPFIVTLCG 120 S+GS+ ALLGV+F+D + +PW LAL L+LM G A+G I G+LITRL +QPF+VTLCG Sbjct: 61 SVGSLVALLGVLFVDFVAVQDMPWMLALPLILMLGAAIGAIHGWLITRLNLQPFVVTLCG 120 Query: 121 LLIYRGAARYYTSDSTRGFGYGDEASTLSSIASGNIAGIPNTFIFLIILALILGVLLHRS 180 LLIYRGAAR+YT+D T GF +G L + +G + G+PNTFI L+I+++ + V+LHRS Sbjct: 121 LLIYRGAARFYTADGTAGFAFGQNFPELEFLTAGRLYGVPNTFIALVIISVAMWVVLHRS 180 Query: 181 VYGRWLYAVGKNEEAARFSGIKTNLVIATAYVISGGLAGVSTVMFVFYTNSVSPSSFGNF 240 V+GR+LYA+GKNEEAAR+SGI T ++ +AYVI G L ++ + F YT S+SP+S G F Sbjct: 181 VFGRYLYAIGKNEEAARYSGIHTGRMVMSAYVICGLLTALAAIYFAMYTRSISPASHGQF 240 Query: 241 YELYAIAAAVLGGCSLRGG 259 YELYAIAAAVLGG SLRGG Sbjct: 241 YELYAIAAAVLGGFSLRGG 259 >ref|YP_002278595.1| monosaccharide-transporting ATPase [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI57855.1| Monosaccharide-transporting ATPase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 150/259 (57%), Positives = 198/259 (76%) Query: 1 MMKKELGLFLLLAVISAITGAINPAFLSFVNLLNMANLIGLFGVFALGEGLVIITGGIDL 60 M+KK+LGL LL+ V+ + INP FL +NL N ANLIGLFG+ ++G+ VIITGGI+L Sbjct: 1 MVKKDLGLLLLIVVVGIVVAIINPRFLLPINLANTANLIGLFGILSIGQAFVIITGGIEL 60 Query: 61 SLGSMFALLGVIFIDLLTTYHVPWPLALLLVLMGGLALGGIQGFLITRLKMQPFIVTLCG 120 S+GS+ ALLGV+F+D + +PW LAL L+L G +G + G+LITRL +QPF+VTLCG Sbjct: 61 SVGSLVALLGVLFVDFIAVQDMPWMLALPLILALGAVIGAVHGWLITRLNLQPFVVTLCG 120 Query: 121 LLIYRGAARYYTSDSTRGFGYGDEASTLSSIASGNIAGIPNTFIFLIILALILGVLLHRS 180 LLIYRGAAR+YT+D T GF +G L + +G G+PN+FI L+I+A+++ ++LHRS Sbjct: 121 LLIYRGAARFYTADGTAGFAFGQNFPELEFLTAGRFYGVPNSFIALVIIAVVMWIMLHRS 180 Query: 181 VYGRWLYAVGKNEEAARFSGIKTNLVIATAYVISGGLAGVSTVMFVFYTNSVSPSSFGNF 240 V+GR+LYA+GKNEEAAR+SGI+T +I +AYVI G L +S + F YT S+SP+S G F Sbjct: 181 VFGRYLYAIGKNEEAARYSGIRTGRMIMSAYVICGLLTALSAIYFAMYTRSISPASHGQF 240 Query: 241 YELYAIAAAVLGGCSLRGG 259 YELYAIAAAVLGG SLRGG Sbjct: 241 YELYAIAAAVLGGFSLRGG 259 >gb|EGE60471.1| putative sugar ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 343 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 151/259 (58%), Positives = 199/259 (76%) Query: 1 MMKKELGLFLLLAVISAITGAINPAFLSFVNLLNMANLIGLFGVFALGEGLVIITGGIDL 60 M+KK+LGL LL+ V+ + INP FL +NL N ANLIGLFG+ ++G+ VIITGGI+L Sbjct: 1 MIKKDLGLLLLIVVVGIVVAIINPRFLLPINLANTANLIGLFGILSIGQAYVIITGGIEL 60 Query: 61 SLGSMFALLGVIFIDLLTTYHVPWPLALLLVLMGGLALGGIQGFLITRLKMQPFIVTLCG 120 S+GS+ ALLGV+F+D + +PW LAL L+L+ G A+G + G+LITRL +QPF+VTLCG Sbjct: 61 SVGSLVALLGVLFVDFVAVQDMPWMLALPLILVLGAAIGAVHGWLITRLNLQPFVVTLCG 120 Query: 121 LLIYRGAARYYTSDSTRGFGYGDEASTLSSIASGNIAGIPNTFIFLIILALILGVLLHRS 180 LLIYRGAAR+YT+D T GF +G L + +G + GIPNTFI L+I+++ + V+LHRS Sbjct: 121 LLIYRGAARFYTADGTAGFAFGQNFPELEFLTAGRLYGIPNTFIALVIISVAMWVVLHRS 180 Query: 181 VYGRWLYAVGKNEEAARFSGIKTNLVIATAYVISGGLAGVSTVMFVFYTNSVSPSSFGNF 240 V+GR+LYA+GKNEEAAR+SGI T ++ +AYVI G L ++ + F YT S+SP+S G F Sbjct: 181 VFGRYLYAIGKNEEAARYSGIHTGRMVMSAYVICGLLTALAAIYFAMYTRSISPASHGQF 240 Query: 241 YELYAIAAAVLGGCSLRGG 259 YELYAIAAAVLGG SLRGG Sbjct: 241 YELYAIAAAVLGGFSLRGG 259