BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0078.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239301.1| putative D-methionine ABC transporter perisp... 452 e-125 ref|YP_001206252.1| putative D-methionine ABC transporter perisp... 451 e-125 ref|YP_001768526.1| NLPA lipoprotein [Methylobacterium sp. 4-46]... 351 7e-95 ref|YP_553753.1| putative outer membrane lipoprotein [Burkholder... 338 6e-91 ref|ZP_06839119.1| NLPA lipoprotein [Burkholderia sp. Ch1-1] >gi... 336 3e-90 >ref|YP_001239301.1| putative D-methionine ABC transporter perisplasmic binding lipoprotein [Bradyrhizobium sp. BTAi1] gb|ABQ35395.1| putative D-methionine ABC transporter, perisplasmic binding lipoprotein [Bradyrhizobium sp. BTAi1] Length = 275 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 216/272 (79%), Positives = 240/272 (88%) Query: 1 MTTARVLFLSTLLILGALTGAALHAETSAKSDLKVGFVPGPYIDEFKVGVAPELEKKGYS 60 +T R L L + +L G A+++ K DLKVGFVPGPYIDEFK+GVAPEL KKGY Sbjct: 4 LTRLRFLGLMAVSVLSIAAGDNALAQSAEKKDLKVGFVPGPYIDEFKIGVAPELAKKGYQ 63 Query: 61 IRYVEFSTGLEANNAVFKGEIDANVMQHTIFLNSYNERQQTDLVGIVHVPTPPMGLYSKK 120 IRYVEFSTGLEANNAVFK EIDANVMQHT+FLNSYNERQ+TDLVGIVHVPTPPMG+YSKK Sbjct: 64 IRYVEFSTGLEANNAVFKSEIDANVMQHTVFLNSYNERQKTDLVGIVHVPTPPMGIYSKK 123 Query: 121 HPVGSPIKPGSTVAVPNDPVNLQRALWILRDLGLVEIRDSKPVDVSELDVIKNPGGIKIV 180 HP+G+ I G+ VAVPNDPVNLQRALWILRDLGLVEIRDSKP+DV+ELDV+KNPGGIKI+ Sbjct: 124 HPLGTKIGAGAKVAVPNDPVNLQRALWILRDLGLVEIRDSKPIDVTELDVVKNPGGIKII 183 Query: 181 PLEAAQAPRALDDVDFAAIQGNFAIYSGLKLTNAFALEKMTTPYINVVAVKQANAGSPWA 240 PLEAAQAPRALDDVDFAAIQGNFAI+SGLKLTNAFALE+MT PYINVVAVK+ NA + WA Sbjct: 184 PLEAAQAPRALDDVDFAAIQGNFAIFSGLKLTNAFALERMTAPYINVVAVKRDNAETAWA 243 Query: 241 QDIVAGYKSQTFKTAILSDRFYDGFTLPDYLK 272 +DIVA YKS FK AIL+DRFYDGFTLPDY+K Sbjct: 244 KDIVAAYKSPGFKAAILADRFYDGFTLPDYMK 275 >ref|YP_001206252.1| putative D-methionine ABC transporter perisplasmic binding lipoprotein (metQ-like) [Bradyrhizobium sp. ORS 278] emb|CAL78027.1| putative D-methionine ABC transporter, perisplasmic binding lipoprotein (metQ-like) [Bradyrhizobium sp. ORS 278] Length = 275 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 216/266 (81%), Positives = 242/266 (90%), Gaps = 2/266 (0%) Query: 7 LFLSTLLILGALTGAALHAETSAKSDLKVGFVPGPYIDEFKVGVAPELEKKGYSIRYVEF 66 L +++L++ +++GA A+ S K +LKVGFVPGPYIDEFK+GVAPEL+KKGY IRYVEF Sbjct: 12 LLAASVLLIVSVSGA--WAQASEKKELKVGFVPGPYIDEFKIGVAPELQKKGYQIRYVEF 69 Query: 67 STGLEANNAVFKGEIDANVMQHTIFLNSYNERQQTDLVGIVHVPTPPMGLYSKKHPVGSP 126 STGLEANNAVFK EIDANVMQHTIFLNSYNERQ TDL GIVHVPTPPMG+YSKKHP+G+ Sbjct: 70 STGLEANNAVFKSEIDANVMQHTIFLNSYNERQNTDLTGIVHVPTPPMGIYSKKHPLGTK 129 Query: 127 IKPGSTVAVPNDPVNLQRALWILRDLGLVEIRDSKPVDVSELDVIKNPGGIKIVPLEAAQ 186 I G+ +AVPNDPVNLQRALWILRDLGL+EIRDSKP+DV+ELDVIKNPGGIKIVPLEAAQ Sbjct: 130 IGQGAKIAVPNDPVNLQRALWILRDLGLIEIRDSKPIDVTELDVIKNPGGIKIVPLEAAQ 189 Query: 187 APRALDDVDFAAIQGNFAIYSGLKLTNAFALEKMTTPYINVVAVKQANAGSPWAQDIVAG 246 APRALDDVDFAAIQGNFAI+SGLKLTNAFALEKMTTPYINVVAVK+ NA + WA+DIV G Sbjct: 190 APRALDDVDFAAIQGNFAIFSGLKLTNAFALEKMTTPYINVVAVKRGNAETAWAKDIVDG 249 Query: 247 YKSQTFKTAILSDRFYDGFTLPDYLK 272 YKS FK AIL+DRFYDGFTLPDY+K Sbjct: 250 YKSPGFKAAILADRFYDGFTLPDYMK 275 >ref|YP_001768526.1| NLPA lipoprotein [Methylobacterium sp. 4-46] gb|ACA16092.1| NLPA lipoprotein [Methylobacterium sp. 4-46] Length = 285 Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 162/241 (67%), Positives = 201/241 (83%), Gaps = 1/241 (0%) Query: 30 KSDLKVGFVPGPYIDEFKVGVAPELEKKGYSIRYVEFSTGLEANNAVFKGEIDANVMQHT 89 + DLKVGF PGPY + F+ GV P L +GY ++ ++FSTGLE N AV +GE+DANVMQH+ Sbjct: 42 RPDLKVGFAPGPYEEAFRAGVEPILRAQGYRVQRLQFSTGLEVNAAVARGEVDANVMQHS 101 Query: 90 IFLNSYNERQQTDLVGIVHVPTPPMGLYSKKHPVGSPIKPGSTVAVPNDPVNLQRALWIL 149 ++L +YN+R TDLVGIV VPTPPMGLYS+KH ++PG++VAVPNDPVNL+RAL IL Sbjct: 102 VYLKAYNDRNGTDLVGIVQVPTPPMGLYSRKHRDAGAVRPGASVAVPNDPVNLERALKIL 161 Query: 150 RDLGLVEIR-DSKPVDVSELDVIKNPGGIKIVPLEAAQAPRALDDVDFAAIQGNFAIYSG 208 RDLG V +R + PVDV+ELDVI NP GI++VPLEAAQAPR LDDVDFAAIQGNFAI+SG Sbjct: 162 RDLGWVRLRPNGNPVDVTELDVIANPAGIRLVPLEAAQAPRVLDDVDFAAIQGNFAIFSG 221 Query: 209 LKLTNAFALEKMTTPYINVVAVKQANAGSPWAQDIVAGYKSQTFKTAILSDRFYDGFTLP 268 LKL+ A ALE+MT+PY+NVVAV++A+AG+ WA+D+VA Y+S FK AI +DRFYDGFTLP Sbjct: 222 LKLSEALALERMTSPYVNVVAVRRASAGTAWARDLVAAYRSDAFKAAIRADRFYDGFTLP 281 Query: 269 D 269 D Sbjct: 282 D 282 >ref|YP_553753.1| putative outer membrane lipoprotein [Burkholderia xenovorans LB400] gb|ABE34403.1| Putative outer membrane lipoprotein [Burkholderia xenovorans LB400] Length = 291 Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 169/275 (61%), Positives = 207/275 (75%), Gaps = 6/275 (2%) Query: 3 TARVLFLSTLLILGALTG----AALHAETSAKS-DLKVGFVPGPYIDEFKVGVAPELEKK 57 + R TLL+ L G A ++ A S +L+VGFVPGPY DEFK GV P+L KK Sbjct: 14 STRRRITGTLLLAATLAGFTAPTAYATDSGAPSQELRVGFVPGPYADEFKAGVEPQLRKK 73 Query: 58 GYSIRYVEFSTGLEANNAVFKGEIDANVMQHTIFLNSYNERQQTDLVGIVHVPTPPMGLY 117 GY++RY+EFSTGLEAN AV++GEI A+VMQH ++L SYN+R TDLVG+V VPTPPMGLY Sbjct: 74 GYAVRYIEFSTGLEANQAVYRGEIIADVMQHEVYLKSYNDRNGTDLVGVVQVPTPPMGLY 133 Query: 118 SKKHPVGSPIKPGSTVAVPNDPVNLQRALWILRDLGLVEIR-DSKPVDVSELDVIKNPGG 176 S KH + +KPG+ VAVPNDPVNL+RAL IL+ +G + I+ + PVDV+E DVI NP G Sbjct: 134 SSKHHSLAEVKPGTRVAVPNDPVNLERALKILQRIGWIRIKPNPNPVDVTERDVIANPAG 193 Query: 177 IKIVPLEAAQAPRALDDVDFAAIQGNFAIYSGLKLTNAFALEKMTTPYINVVAVKQANAG 236 IKIVPLE+AQAPRAL+DVD+AAIQGNFAI+SG KLT+A ALE+MT PYIN V VK +N Sbjct: 194 IKIVPLESAQAPRALEDVDYAAIQGNFAIFSGHKLTDALALEEMTPPYINQVVVKASNRN 253 Query: 237 SPWAQDIVAGYKSQTFKTAILSDRFYDGFTLPDYL 271 + QDIV Y+S F+ AI S+RFYDGF LP Y Sbjct: 254 ARATQDIVQAYQSADFQRAIRSNRFYDGFRLPAYF 288 >ref|ZP_06839119.1| NLPA lipoprotein [Burkholderia sp. Ch1-1] gb|EFG73565.1| NLPA lipoprotein [Burkholderia sp. Ch1-1] Length = 291 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 165/252 (65%), Positives = 200/252 (79%), Gaps = 2/252 (0%) Query: 22 ALHAETSAKS-DLKVGFVPGPYIDEFKVGVAPELEKKGYSIRYVEFSTGLEANNAVFKGE 80 A A++ A S +L+VGFVPGPY DEFK GV P+L KKGY++RYVEFSTGLEAN AV++GE Sbjct: 37 AYAADSGAPSQELRVGFVPGPYADEFKAGVEPQLRKKGYAVRYVEFSTGLEANQAVYRGE 96 Query: 81 IDANVMQHTIFLNSYNERQQTDLVGIVHVPTPPMGLYSKKHPVGSPIKPGSTVAVPNDPV 140 I A+VMQH ++L SYN+R TDLVG+V VPTPPMGLYS KH + +KPG+ VAVPNDPV Sbjct: 97 IIADVMQHEVYLKSYNDRNGTDLVGVVQVPTPPMGLYSSKHHSLAEVKPGTRVAVPNDPV 156 Query: 141 NLQRALWILRDLGLVEIR-DSKPVDVSELDVIKNPGGIKIVPLEAAQAPRALDDVDFAAI 199 NL+RAL IL+ +G + I+ + PVDV+E DVI NP GIKIVPLE+AQAPRAL+DVD+AAI Sbjct: 157 NLERALKILQRIGWIRIKPNPNPVDVTERDVIANPAGIKIVPLESAQAPRALEDVDYAAI 216 Query: 200 QGNFAIYSGLKLTNAFALEKMTTPYINVVAVKQANAGSPWAQDIVAGYKSQTFKTAILSD 259 QGNFAI+SG KLT+A ALE+MT PYIN V VK +N + QDIV Y+S F+ AI S+ Sbjct: 217 QGNFAIFSGHKLTDALALEEMTPPYINQVVVKASNRNARATQDIVQAYQSADFQRAIRSN 276 Query: 260 RFYDGFTLPDYL 271 RFYDGF LP Y Sbjct: 277 RFYDGFRLPAYF 288