BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0075.p (537 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240766.1| hypothetical protein BBta_4836 [Bradyrhizobi... 627 e-177 ref|YP_320624.1| hypothetical protein Ava_0103 [Anabaena variabi... 573 e-161 ref|YP_001832961.1| hypothetical protein Bind_1848 [Beijerinckia... 554 e-155 ref|YP_555389.1| putative monooxygenase [Burkholderia xenovorans... 535 e-149 ref|YP_558859.1| oxidoreductase [Burkholderia xenovorans LB400] ... 521 e-145 >ref|YP_001240766.1| hypothetical protein BBta_4836 [Bradyrhizobium sp. BTAi1] gb|ABQ36860.1| hypothetical protein BBta_4836 [Bradyrhizobium sp. BTAi1] Length = 479 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 326/465 (70%), Positives = 376/465 (80%), Gaps = 8/465 (1%) Query: 1 MPQSDPDSVAREALRLIGADPQNWVPD-------XVVVGGGQSGAAFAFAFRRAGIGEVS 53 M Q + D AR+ LRLIG DPQNWVPD VVVGGG SG+ FAFA RR+GIG+V+ Sbjct: 1 MSQPNLDGPARDTLRLIGPDPQNWVPDRNGVDHNVVVVGGGHSGSTFAFALRRSGIGKVA 60 Query: 54 VIDAAADASKAGVWLTSARMHKLRTPKTLPGPELGLPGLGFQAWYEARHGTAAFDALDRI 113 VIDAA DA+ +G+WLT+ARM +LRTPKTLPGPELGLPGL FQAWYEARHG AA+ +DRI Sbjct: 61 VIDAAKDAANSGIWLTTARMKRLRTPKTLPGPELGLPGLSFQAWYEARHGEAAYAEIDRI 120 Query: 114 PRLDWATYLDWYRRVTGVGIRYGTRLLRIEPAADHLRVHLERSGVTTIETTRKLVLATGF 173 R+DWA YLDWYR V + ++YGTRLLRIEPAADHL++H+ER G T ETTRK+VLA GF Sbjct: 121 ARVDWAAYLDWYRSVLNIKVQYGTRLLRIEPAADHLKLHIERDGKTRTETTRKVVLANGF 180 Query: 174 AGSGGAYVPDVL-RALPKRFHAHTSEKIDFRTLRGLSVAVLGSAASAFDAAAAALEAGAR 232 G+GG YVP+V+ LP +AHTS+ IDF LRG SVAV+GSAASAFDAAA ALE+GA Sbjct: 181 LGAGGPYVPEVIAHRLPPSLYAHTSQAIDFPALRGRSVAVVGSAASAFDAAAVALESGAA 240 Query: 233 DVHLFARRESLAALPVIRIRGYPGAYDNYGSLPDAVRWHQASRFRQAGSTPPPDAISRAV 292 +VHLFARR LA+LPVIRIRGYPGAYDNYG+LPDA+RWHQA RFRQAGSTPPPDAI+RAV Sbjct: 241 EVHLFARRHELASLPVIRIRGYPGAYDNYGALPDAIRWHQAIRFRQAGSTPPPDAIARAV 300 Query: 293 AFPNFHLHLGAPWTSAQLKGVRPVAITPQGEIAFDFAIAGTGYSVDLGAQSELGDFADEI 352 NFHLHL +PWT + + R V +TP+G+ FDF I GTGY+VD + EL DFAD I Sbjct: 301 KHRNFHLHLSSPWTDVRTEDERVVGVTPRGDFKFDFVILGTGYTVDAHRRPELADFADHI 360 Query: 353 LLWRDRFVPPDGEKDDSLAAYPYLGSGHEYLEKVPGRAPYLKDIHVFNPAAFVSFGLPIG 412 LLWRDRF PP E+DD L YPYLG+GHEYLEK PGRAPYLK+IHVFNPAAFVS+GLP+G Sbjct: 361 LLWRDRFTPPSDEQDDGLGTYPYLGAGHEYLEKQPGRAPYLKNIHVFNPAAFVSYGLPVG 420 Query: 413 DVPSFKRDIPGITARISRDLFLADLASHEARINGEIAEDFTAELY 457 DVPSFKRDIPG+ +RISRDLFL DL +HEARING + DF ELY Sbjct: 421 DVPSFKRDIPGVVSRISRDLFLDDLPAHEARINGSVDPDFGGELY 465 >ref|YP_320624.1| hypothetical protein Ava_0103 [Anabaena variabilis ATCC 29413] gb|ABA19729.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 480 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 296/474 (62%), Positives = 346/474 (72%), Gaps = 8/474 (1%) Query: 4 SDPDSVAREALRLIGADPQNWVPD-------XVVVGGGQSGAAFAFAFRRAGIGEVSVID 56 +D D AREALRL+G DP+NWV D +VGG SG+ FAFA RRAGIG V+VID Sbjct: 5 TDLDFAAREALRLLGPDPENWVSDRPDIDHNVTIVGGSGSGSTFAFALRRAGIGRVTVID 64 Query: 57 AAADASKAGVWLTSARMHKLRTPKTLPGPELGLPGLGFQAWYEARHGTAAFDALDRIPRL 116 AA D AGVWLT ARM KLRTPK LPGPELG+P L FQAWYEARHG A+ A+DRIPR+ Sbjct: 65 AALDEGHAGVWLTRARMKKLRTPKNLPGPELGVPALSFQAWYEARHGVEAYAAIDRIPRV 124 Query: 117 DWATYLDWYRRVTGVGIRYGTRLLRIEPAADHLRVHLERSGVTTIETTRKLVLATGFAGS 176 WA YL WYR + +RY T+L+RIEP A R+HLE SGV+ IETTRK++ A G AG+ Sbjct: 125 LWAEYLSWYRHFLNIPVRYQTKLVRIEPVAGFFRLHLEVSGVSQIETTRKIIFANGVAGT 184 Query: 177 GGAYVPDVLRALPKRFHAHTSEKIDFRTLRGLSVAVLGSAASAFDAAAAALEAGARDVHL 236 GG +P VL +LP++ +AHTS++IDF LRG +VAVLG+AASAFDAA ALE+GA++VHL Sbjct: 185 GGPNIPPVLASLPRKLYAHTSDEIDFHELRGKTVAVLGAAASAFDAAGVALESGAKEVHL 244 Query: 237 FARRESLAALPVIRIRGYPGAYDNYGSLPDAVRWHQASRFRQAGSTPPPDAISRAVAFPN 296 FARR +A+LPVIR+RGYPGAY NY LPDA RW QA RF QAGSTPPPDAI R AF N Sbjct: 245 FARRSEIASLPVIRVRGYPGAYYNYAQLPDAARWFQAWRFNQAGSTPPPDAIERVTAFSN 304 Query: 297 FHLHLGAPWTSAQLKGVRPVAITPQGEIAFDFAIAGTGYSVDLGAQSELGDFADEILLWR 356 FHLHL APW A +G R VA FDFAIAGTGY VD + EL DFA I LWR Sbjct: 305 FHLHLSAPWREAHNQGDRIVAQVNDDVFEFDFAIAGTGYFVDPTKRPELADFAHHIALWR 364 Query: 357 DRFVPPDGEKDDSLAAYPYLGSGHEYLEKVPGRAPYLKDIHVFNPAAFVSFGLPIGDVPS 416 DR+ PP ++++ L+ YPYLG+ HEY EKV G APYLKDIHVFNPA FVSFGLPIGDVPS Sbjct: 365 DRYEPPADQRNEQLSTYPYLGNAHEYQEKVLGSAPYLKDIHVFNPAGFVSFGLPIGDVPS 424 Query: 417 FKRDIPGITARISRDLFLADLASHEARINGE-IAEDFTAELYXRQRTAAAARRG 469 +RD+P I +RIS DLF AD + HEARI + +A DF LY AA+ G Sbjct: 425 IRRDVPAIVSRISHDLFFADWSLHEARITSDNVAPDFEPSLYADAVWKEAAKVG 478 >ref|YP_001832961.1| hypothetical protein Bind_1848 [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB95472.1| conserved hypothetical protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 480 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 295/479 (61%), Positives = 349/479 (72%), Gaps = 15/479 (3%) Query: 1 MPQSDP-DSVAREALRLIGADPQNWVP-------DXVVVGGGQSGAAFAFAFRRAGIGEV 52 M SD D A ALRL+G DP +WV + +VGGGQ+G AFAFA RRAGIG+V Sbjct: 1 MTDSDTFDIEALNALRLLGPDPADWVAERPGLDHNVTIVGGGQTGTAFAFALRRAGIGKV 60 Query: 53 SVIDAAADASKAGVWLTSARMHKLRTPKTLPGPELGLPGLGFQAWYEARHGTAAFDALDR 112 ++IDAAAD + AG+WLT ARM+KLRTPK L GPELGLP L FQAWYEARHG A+ A+DR Sbjct: 61 TIIDAAADENGAGIWLTRARMNKLRTPKNLVGPELGLPALSFQAWYEARHGAEAYAAIDR 120 Query: 113 IPRLDWATYLDWYRRVTGVGIRYGTRLLRIEPAADHLRVHLERSGVTTIETTRKLVLATG 172 IPR WA YL WYR G+ IRYGTRL R+EPA R+HLE G IETTRK++ G Sbjct: 121 IPRTAWAAYLKWYRTFLGIEIRYGTRLARVEPADGAFRLHLESKGEPRIETTRKIIFGNG 180 Query: 173 FAGSGGAYVPDVL-RALPKRFHAHTSEKIDFRTLRGLSVAVLGSAASAFDAAAAALEAGA 231 GSGGA++P+VL + LP+ AHTS+ IDF L+G VAV+G AASAFDAAA ALEAGA Sbjct: 181 ILGSGGAFIPEVLAKGLPRSLLAHTSDPIDFSALKGKDVAVVGGAASAFDAAATALEAGA 240 Query: 232 RDVHLFARRESLAALPVIRIRGYPGAYDNYGSLPDAVRWHQASRFRQAGSTPPPDAISRA 291 V LF+RRE+LA++P++R+RGYPGAYDNY LPDA+RWHQA R+RQAGSTPPPD+I R Sbjct: 241 ASVRLFSRRETLASVPILRVRGYPGAYDNYAYLPDAIRWHQAIRYRQAGSTPPPDSIERV 300 Query: 292 VAFPNFHLHLGAPWTSAQLKGVRPVAITPQGEIAFDFAIAGTGYSVDLGAQSELGDFADE 351 + F NFHLHLGAPWT A ++ R AFD+ IAGTGY D + EL DFA++ Sbjct: 301 LRFANFHLHLGAPWTEAHVRDGRAETTIKGETFAFDYVIAGTGYFSDPNVRPELADFAED 360 Query: 352 ILLWRDRFVPPDGEKDDSLAAYPYLGSGHEYLEKVPGRAPYLKDIHVFNPAAFVSFGLPI 411 ILLWRD + PP E+D L A+PYLG GHEYLEK PG AP+LK+IHVFNP+ FVSFGLPI Sbjct: 361 ILLWRDFYTPPADEQDAYLGAHPYLGFGHEYLEKEPGTAPFLKNIHVFNPSGFVSFGLPI 420 Query: 412 GDVPSFKRDIPGITARISRDLFLADLASHEARINGEIAEDFTAELYX------RQRTAA 464 GDVPS KRD+PG+ ARISRDLFL DL +HE RI G + DF LY RQ+ AA Sbjct: 421 GDVPSLKRDVPGVVARISRDLFLDDLPAHERRITGTVPPDFEDSLYAGAVHGDRQKVAA 479 >ref|YP_555389.1| putative monooxygenase [Burkholderia xenovorans LB400] gb|ABE36039.1| Putative monooxygenase [Burkholderia xenovorans LB400] Length = 482 Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust. Identities = 291/467 (62%), Positives = 339/467 (72%), Gaps = 13/467 (2%) Query: 3 QSDPDSVAREALRLIGADPQNWVP-------DXVVVGGGQSGAAFAFAFRRAGIGEVSVI 55 + PD A + LRLIG P NWVP + V+VGGGQ+G AFAFA RRAGIG+VSVI Sbjct: 4 STHPDQHAIDTLRLIGPAPDNWVPPRAGIDHNVVIVGGGQTGTAFAFALRRAGIGQVSVI 63 Query: 56 DAAADASKAGVWLTSARMHKLRTPKTLPGPELGLPGLGFQAWYEARHGTAAFDALDRIPR 115 DAA D AGVWL ARM+KLRTPKTL GPE GLPGL FQAWYEAR G A+++ +DRI R Sbjct: 64 DAAPDEDHAGVWLNRARMNKLRTPKTLVGPEAGLPGLSFQAWYEARFGAASYEEIDRIAR 123 Query: 116 LDWATYLDWYRRVTGVGIRYGTRLLRIEPAADHLRVHLE-RSGVTT---IETTRKLVLAT 171 WA YL WYR + IRYGTRL IEP +H R+HLE R G T +ET RK++L Sbjct: 124 TRWAEYLAWYRHFLDIPIRYGTRLTLIEPVDEHFRLHLEVRDGATVKSVVETARKIILGN 183 Query: 172 GFAGSGGAYVPDVLRALPKRFHAHTSEKIDFRTLRGLSVAVLGSAASAFDAAAAALEAGA 231 G AG+G Y+P L+ LP AHT++ IDF LRG SVAV+G+AASAFDAAA ALEAGA Sbjct: 184 GVAGNGAPYIPPALKNLPPSHLAHTADAIDFAALRGKSVAVIGAAASAFDAAATALEAGA 243 Query: 232 RDVHLFARRESLAALPVIRIRGYPGAYDNYGSLPDAVRWHQASRFRQAGSTPPPDAISRA 291 +VHLFARRE +A++PVIR R YPGAYDNY LPDA+RW QA RFR+AGSTPP DA+ R Sbjct: 244 AEVHLFARRERIASVPVIRTRAYPGAYDNYFHLPDAIRWAQARRFRRAGSTPPVDAVERV 303 Query: 292 VAFPNFHLHLGAPWTSAQLKGVRPVAITPQGE-IAFDFAIAGTGYSVDLGAQSELGDFAD 350 FPNFHLH G WT A ++ R V + GE AFDF IAGTGY VD + EL A Sbjct: 304 TRFPNFHLHPGTSWTEADVRNGR-VETSVAGEPFAFDFVIAGTGYVVDPALRPELAQLAG 362 Query: 351 EILLWRDRFVPPDGEKDDSLAAYPYLGSGHEYLEKVPGRAPYLKDIHVFNPAAFVSFGLP 410 I LWRD++VP + DD+L AYPYLG+ EYLEK G APYL++IHV+NPAAFVSFGLP Sbjct: 363 RIRLWRDQYVPASNDSDDALGAYPYLGAALEYLEKTEGDAPYLRNIHVYNPAAFVSFGLP 422 Query: 411 IGDVPSFKRDIPGITARISRDLFLADLASHEARINGEIAEDFTAELY 457 +GDVPS KRDIP + RISRDLFLADL +HEARING+IA DF A +Y Sbjct: 423 VGDVPSMKRDIPAVVQRISRDLFLADLHAHEARINGDIAADFDASIY 469 >ref|YP_558859.1| oxidoreductase [Burkholderia xenovorans LB400] gb|ABE30807.1| Putative oxidoreductase protein, TrkA domain- containing (K+ transport) [Burkholderia xenovorans LB400] Length = 505 Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust. Identities = 291/467 (62%), Positives = 341/467 (73%), Gaps = 11/467 (2%) Query: 4 SDPDSVAREALRLIGADPQNWVP-------DXVVVGGGQSGAAFAFAFRRAGIGEVSVID 56 S PD A + LRLIG P NWVP + ++GGGQ+GAAFAFA RRAGIG+VSVID Sbjct: 26 SHPDQHALDTLRLIGPAPDNWVPPRDGIDHNVAIIGGGQTGAAFAFALRRAGIGQVSVID 85 Query: 57 AAADASKAGVWLTSARMHKLRTPKTLPGPELGLPGLGFQAWYEARHGTAAFDALDRIPRL 116 AA D S+AGVWL ARM++LRTPKTL GPE GLPGL FQAWYEAR G A++ +DRIPR Sbjct: 86 AAPDESQAGVWLNRARMNRLRTPKTLVGPEAGLPGLSFQAWYEARFGAASYAEIDRIPRT 145 Query: 117 DWATYLDWYRRVTGVGIRYGTRLLRIEPAADHLRVHLE-RSGVTT---IETTRKLVLATG 172 WA YL WYR + IRYGTRL RIEP +H R+HLE R G + +ET RK+VL+ G Sbjct: 146 RWAEYLAWYRHFLDIPIRYGTRLTRIEPVGEHFRLHLEVREGASVRGVVETARKIVLSNG 205 Query: 173 FAGSGGAYVPDVLRALPKRFHAHTSEKIDFRTLRGLSVAVLGSAASAFDAAAAALEAGAR 232 AG+GG +P VL+ LP AHTS+ IDF LRG SVAV+G+AASAFDAAA ALEAGA Sbjct: 206 VAGNGGPNLPAVLKDLPPALFAHTSQAIDFAALRGKSVAVIGAAASAFDAAATALEAGAE 265 Query: 233 DVHLFARRESLAALPVIRIRGYPGAYDNYGSLPDAVRWHQASRFRQAGSTPPPDAISRAV 292 VHLFARRE +A++PV R R YPGAYDNY LPDA+RW QA R R+AGSTPP DA+ R Sbjct: 266 QVHLFARRERIASVPVTRTRAYPGAYDNYFQLPDAIRWSQARRLREAGSTPPADAVERVT 325 Query: 293 AFPNFHLHLGAPWTSAQLKGVRPVAITPQGEIAFDFAIAGTGYSVDLGAQSELGDFADEI 352 FPNFHLHLGAPWT A ++ R AFDF IAGTGY V+ + EL +FA I Sbjct: 326 RFPNFHLHLGAPWTQAAVRDKRVETRVAGEPFAFDFVIAGTGYVVNPALRPELAEFAAHI 385 Query: 353 LLWRDRFVPPDGEKDDSLAAYPYLGSGHEYLEKVPGRAPYLKDIHVFNPAAFVSFGLPIG 412 LWRD++VP + D++L ++PYLG+G EYLEKV G APYLK IHV+NPAAFVSFGLP+G Sbjct: 386 RLWRDQYVPNAADSDEALGSHPYLGAGLEYLEKVEGAAPYLKHIHVYNPAAFVSFGLPVG 445 Query: 413 DVPSFKRDIPGITARISRDLFLADLASHEARINGEIAEDFTAELYXR 459 DVPS KRDIP + RISRDLFLADL +HEAR N +IA DF +Y R Sbjct: 446 DVPSMKRDIPAVVQRISRDLFLADLDAHEARFNDDIAADFDDSIYAR 492