BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0071.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBA30376.1| hypothetical protein Csp_C23240 [Curvibacter put... 334 8e-90 ref|YP_004645345.1| nitrate/sulfonate/bicarbonate ABC transporte... 310 1e-82 ref|YP_003115011.1| ABC transporter permease [Catenulispora acid... 303 3e-80 ref|YP_002782204.1| ABC transporter permease protein [Rhodococcu... 301 1e-79 ref|YP_704884.1| ABC transporter permease [Rhodococcus jostii RH... 300 2e-79 >emb|CBA30376.1| hypothetical protein Csp_C23240 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 279 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 172/243 (70%), Positives = 201/243 (82%) Query: 34 FGRRSLLLIALLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASLLRAL 93 +G RS L++AL A WE APRL L D F PP S+V AAGW LA G+L+ SAS+ RAL Sbjct: 31 WGWRSALVVALAAWWELAPRLELTDPAFFPPLSEVLAAGWALALNGQLWQHTSASVGRAL 90 Query: 94 SGFLVSVVLFVPLGLAVGWHTRLGDLLNQFIEVCRNTAPLALLPVFILLLGIGELSKVTM 153 GF ++V+ VPLGLA+GW+ LGD LN IE+ RNTA LALLPVFILLLGIGE+SKV M Sbjct: 91 GGFGIAVLYAVPLGLAIGWYRSLGDFLNPLIELLRNTAALALLPVFILLLGIGEVSKVAM 150 Query: 154 VVYSCAWPLLLNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIRLASA 213 VVY+C+WPLLLNTIAAVKQVDPLLIKSARTMGA+ +QLF KVILPA++PTIFVGIRLASA Sbjct: 151 VVYACSWPLLLNTIAAVKQVDPLLIKSARTMGASARQLFIKVILPASVPTIFVGIRLASA 210 Query: 214 SAMLVLVASEMVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALERRLM 273 +++LVLVA+EMVGAK+GLGYLII +QYSFLI MYFGII ITVIG+ FNA+L+ ERRL Sbjct: 211 TSILVLVAAEMVGAKSGLGYLIIYAQYSFLIADMYFGIIAITVIGVVFNALLQVAERRLT 270 Query: 274 RWK 276 WK Sbjct: 271 AWK 273 >ref|YP_004645345.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Paenibacillus mucilaginosus KNP414] gb|AEI45475.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Paenibacillus mucilaginosus KNP414] Length = 275 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 148/247 (59%), Positives = 196/247 (79%) Query: 34 FGRRSLLLIALLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASLLRAL 93 F ++ + +IA+LA+WE PRLGL+D FLPPFS++ +A W LA +GELY ASL+R+L Sbjct: 27 FLQKWIAIIAVLALWEVFPRLGLVDTTFLPPFSEIVSAWWALAASGELYSHVEASLIRSL 86 Query: 94 SGFLVSVVLFVPLGLAVGWHTRLGDLLNQFIEVCRNTAPLALLPVFILLLGIGELSKVTM 153 +G+ ++++ +PLG+A+GW+ R +++N +E RNTA LALLPVFILLLGIGE SK+ + Sbjct: 87 TGYALALLYAIPLGIAIGWYKRFAEIINPLLETMRNTAALALLPVFILLLGIGEASKIAL 146 Query: 154 VVYSCAWPLLLNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIRLASA 213 V+Y+C+WP+LLNTI+ VK VDPLLIKSA++MG + +LFRKVILPAA+PTIFVG+RLA A Sbjct: 147 VIYACSWPILLNTISGVKHVDPLLIKSAQSMGLSNVRLFRKVILPAAVPTIFVGVRLAGA 206 Query: 214 SAMLVLVASEMVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALERRLM 273 S++LVLVA+EM+GAKAGLGYLI +QYSF+IPQMY GII I+ IG FN L LE+R Sbjct: 207 SSILVLVAAEMIGAKAGLGYLITYTQYSFMIPQMYAGIITISAIGFLFNFGLVKLEQRFT 266 Query: 274 RWKAQVA 280 WK A Sbjct: 267 SWKTTQA 273 >ref|YP_003115011.1| ABC transporter permease [Catenulispora acidiphila DSM 44928] gb|ACU73170.1| binding-protein-dependent transport systems inner membrane component [Catenulispora acidiphila DSM 44928] Length = 278 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 150/247 (60%), Positives = 195/247 (78%) Query: 30 GLAAFGRRSLLLIALLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASL 89 GLA FG+R++ ++A LA+WE APR+GL+D FL PFS+ A +LA+ G+L+D+ ASL Sbjct: 27 GLAVFGKRTVAIVAFLALWEIAPRVGLVDRTFLVPFSEAVKALIELAKDGQLWDNTRASL 86 Query: 90 LRALSGFLVSVVLFVPLGLAVGWHTRLGDLLNQFIEVCRNTAPLALLPVFILLLGIGELS 149 +R+LSGFL+++ + VPLGL +GW+ + ++L +E+ RNTA LALLPVFILLLGIGE S Sbjct: 87 VRSLSGFLIAIGVGVPLGLLIGWYRPVAEILGPLLELFRNTAALALLPVFILLLGIGETS 146 Query: 150 KVTMVVYSCAWPLLLNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIR 209 K+ +VVY+C WP+LLNTI+ V+ VDP+LIKSAR+M P +LF KVILPAALPT+F GIR Sbjct: 147 KIAIVVYACTWPILLNTISGVRSVDPVLIKSARSMALPPHRLFAKVILPAALPTVFTGIR 206 Query: 210 LASASAMLVLVASEMVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALE 269 LA AS++LVLVA+EMVGAKAGLGYL+ SQ +F IP MY II I V+GL FN +L LE Sbjct: 207 LAGASSILVLVAAEMVGAKAGLGYLVNASQQNFAIPDMYAAIIAIAVVGLVFNHLLVLLE 266 Query: 270 RRLMRWK 276 RRL RW+ Sbjct: 267 RRLTRWR 273 >ref|YP_002782204.1| ABC transporter permease protein [Rhodococcus opacus B4] dbj|BAH53259.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 295 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 146/241 (60%), Positives = 195/241 (80%) Query: 36 RRSLLLIALLAIWEAAPRLGLIDAVFLPPFSDVNAAGWQLAQTGELYDDASASLLRALSG 95 + S+ ++A LA+WE APR+GL+D VFLPPFS V A + L Q+GEL+ SASL RAL G Sbjct: 54 KPSIAIVAFLALWEIAPRVGLVDEVFLPPFSTVIEAFFDLVQSGELWQHVSASLSRALIG 113 Query: 96 FLVSVVLFVPLGLAVGWHTRLGDLLNQFIEVCRNTAPLALLPVFILLLGIGELSKVTMVV 155 F V+VV+ +PLG+A+ W+ + D LN +E+ RNTA LALLPVFIL+LGIGE SK+ +V+ Sbjct: 114 FFVAVVIAIPLGIAIAWYRPVSDFLNPILELFRNTAALALLPVFILILGIGEESKIALVI 173 Query: 156 YSCAWPLLLNTIAAVKQVDPLLIKSARTMGATPQQLFRKVILPAALPTIFVGIRLASASA 215 Y+C +P+LLNTI+ V+ VDPLLIKSA ++G +P +LF+KV+LPAA+PTIF GIR+A+AS+ Sbjct: 174 YACTFPILLNTISGVRTVDPLLIKSASSLGLSPVRLFQKVVLPAAVPTIFTGIRMAAASS 233 Query: 216 MLVLVASEMVGAKAGLGYLIINSQYSFLIPQMYFGIIGITVIGLAFNAVLEALERRLMRW 275 +LVL+A+EMVGAKAGLGYLI SQ++F IP MY GI+ I+V+GL+ NAVL +ERRL RW Sbjct: 234 ILVLIAAEMVGAKAGLGYLITASQFNFQIPNMYAGIVAISVLGLSLNAVLVLIERRLSRW 293 Query: 276 K 276 + Sbjct: 294 R 294 >ref|YP_704884.1| ABC transporter permease [Rhodococcus jostii RHA1] gb|ABG96726.1| ABC transporter, permease component [Rhodococcus jostii RHA1] Length = 291 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 153/268 (57%), Positives = 203/268 (75%), Gaps = 4/268 (1%) Query: 13 APAARSPLVSAVRAATRGLAAFGRR----SLLLIALLAIWEAAPRLGLIDAVFLPPFSDV 68 +PA+ P AV+ A L R S+ ++A LA+WE APR GL+D VFLPPFS V Sbjct: 23 SPASTPPQPGAVQRAGAALRPIAWRILKPSVAIVAFLALWEIAPRAGLVDEVFLPPFSTV 82 Query: 69 NAAGWQLAQTGELYDDASASLLRALSGFLVSVVLFVPLGLAVGWHTRLGDLLNQFIEVCR 128 A + L ++GEL+ SASL RAL GF V+VV+ +PLG+A+ W+ + D LN +E+ R Sbjct: 83 VEAFFDLVKSGELWQHVSASLSRALIGFFVAVVIAIPLGIAIAWYRPVSDFLNPILELFR 142 Query: 129 NTAPLALLPVFILLLGIGELSKVTMVVYSCAWPLLLNTIAAVKQVDPLLIKSARTMGATP 188 NTA LALLPVFIL+LGIGE SK+ +V+Y+C +P+LLNTI+ V+ VDPLLIKSA ++G +P Sbjct: 143 NTAALALLPVFILILGIGEESKIALVIYACTFPILLNTISGVRTVDPLLIKSASSLGLSP 202 Query: 189 QQLFRKVILPAALPTIFVGIRLASASAMLVLVASEMVGAKAGLGYLIINSQYSFLIPQMY 248 +LF+KV+LPAA+PTIF GIR+A+AS++LVL+A+EMVGAKAGLGYLI SQ++F IP MY Sbjct: 203 VRLFQKVVLPAAVPTIFTGIRMAAASSILVLIAAEMVGAKAGLGYLITASQFNFQIPNMY 262 Query: 249 FGIIGITVIGLAFNAVLEALERRLMRWK 276 GI+ I+V+GL NAVL +ERRL RW+ Sbjct: 263 AGIVAISVLGLTLNAVLVLIERRLSRWR 290