BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0056.p (542 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240800.1| putative fumarate/succinate reductase flavop... 818 0.0 ref|YP_001831689.1| fumarate reductase/succinate dehydrogenase f... 742 0.0 ref|ZP_06305808.1| Glucose-inhibited division protein A [Raphidi... 669 0.0 ref|YP_325492.1| glucose-inhibited division protein A [Anabaena ... 667 0.0 ref|ZP_06308932.1| Glucose-inhibited division protein A [Cylindr... 667 0.0 >ref|YP_001240800.1| putative fumarate/succinate reductase flavoprotein subunit [Bradyrhizobium sp. BTAi1] gb|ABQ36894.1| putative fumarate/succinate reductase flavoprotein subunit [Bradyrhizobium sp. BTAi1] Length = 542 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/542 (75%), Positives = 451/542 (83%) Query: 1 MTVHERRAEQRTVPGGSVEFDADVLVIGGGPAGTWAAVSAAERGARVVLADKGFCGTSGA 60 M RAE+R G V FDADVLV+GGGPAGTWAA+SAAERGARVVLADKGFCGTSGA Sbjct: 1 MVAIRPRAERRNDSNGGVSFDADVLVLGGGPAGTWAAISAAERGARVVLADKGFCGTSGA 60 Query: 61 TAAAGTGVWYVDPNPALREAAMANREKMGGHLQDRRWMARVLDQTYEDSNRLAAWGYPYP 120 TA +GTGVWYVDP PA REAAMA+RE GG+LQ R WMARVLD+TY SNRLA WGYPYP Sbjct: 61 TAPSGTGVWYVDPAPAQREAAMASREAAGGYLQSRHWMARVLDETYAQSNRLAEWGYPYP 120 Query: 121 VDDSGKSQRNSLQGPEYMRLMRKRTKQAGVTILDHSPALELLVEDDGSVAGASGMCRQKH 180 D G+ +RNSLQGPEYMRLMRKRTK AGVTILDHSPALELLV+D G+VAGASG+ RQ Sbjct: 121 AGDDGQPRRNSLQGPEYMRLMRKRTKSAGVTILDHSPALELLVDDSGAVAGASGVRRQHE 180 Query: 181 DRWIVRAKAVVIATGGCAFLSKTLGSNVLTGDGYLMAAEVGAEFSSMEFSNPYAISPAFG 240 D W VRA AVV+ATGGCAFLSKTLGSN LTGDGYLMAAE GAEFS MEFSN YAIS AFG Sbjct: 181 DSWTVRAGAVVVATGGCAFLSKTLGSNGLTGDGYLMAAEAGAEFSGMEFSNAYAISAAFG 240 Query: 241 SVTKTLFYGWATFSYEDGSVVPGAASKGGRSAIARALLQGPVYARLDKADDDVQRHMRAS 300 SVTKTLF+GWATF+YEDGSVVPGAASKGGR AIARALL GPVYA+LDKAD+ V+ MRAS Sbjct: 241 SVTKTLFFGWATFTYEDGSVVPGAASKGGRKAIARALLHGPVYAQLDKADEQVRATMRAS 300 Query: 301 QPNFFLPFDRTGIDPFRERFPVTLRLEGTVRGTGGLRIVDDSCATSVPGLYAAGDAATRE 360 QPNFFLP+DRTGIDPF ERFP+TLRLEGT+RGTGGLRI DDSCAT+VPGL+AAGDAATRE Sbjct: 301 QPNFFLPYDRTGIDPFTERFPITLRLEGTIRGTGGLRITDDSCATTVPGLFAAGDAATRE 360 Query: 361 LICGGFTGGGSHNAAWAMSSGTWAGSGAAGYARQLGPARQRRLVSAGTVAFRSRAGRAFE 420 LICGGFTGGGSHNAAWA+SSG++AG GAA YA Q A + AGT ++ RA + Sbjct: 361 LICGGFTGGGSHNAAWAISSGSFAGRGAADYALQTRRAPATSVRRAGTAGLQAAPRRALD 420 Query: 421 PAALAKAVQDEVYPYELNYFRHASRLEGALARLDAEWSDASAADAASKDDLLRARESAAM 480 PA LA+AVQDE YPYE NYFR+A RL +L RLD W + + ADAA+ DL+R RE AAM Sbjct: 421 PAQLARAVQDEAYPYETNYFRNAERLTASLGRLDRLWREVTEADAAAWPDLIRTREGAAM 480 Query: 481 LATSRWMYRSALARNESRGMHRRDDYPDQDDRQRHYVTSGGLDEVWTTVRPHADASYAEA 540 LAT+RWMYRSALAR ESRGMH R+D+P D RQRHYVTSGGLDEVWT RPH + + EA Sbjct: 481 LATARWMYRSALARTESRGMHWREDHPQLDARQRHYVTSGGLDEVWTEPRPHDEGALVEA 540 Query: 541 AE 542 AE Sbjct: 541 AE 542 >ref|YP_001831689.1| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB94200.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 536 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/516 (68%), Positives = 433/516 (83%) Query: 16 GSVEFDADVLVIGGGPAGTWAAVSAAERGARVVLADKGFCGTSGATAAAGTGVWYVDPNP 75 GSVEFDADVLV+GGGPAGTWAA +AAERGARV+LADKGFCG+SGATA +GTGVWY++ + Sbjct: 12 GSVEFDADVLVLGGGPAGTWAACTAAERGARVILADKGFCGSSGATAPSGTGVWYIEADA 71 Query: 76 ALREAAMANREKMGGHLQDRRWMARVLDQTYEDSNRLAAWGYPYPVDDSGKSQRNSLQGP 135 REAAMA+RE +GG+LQDR WM RVLD+T++ N LAA GYP+P+D +G S+RNSLQGP Sbjct: 72 EKREAAMASREVLGGYLQDRLWMHRVLDRTFDSINLLAARGYPFPIDANGHSRRNSLQGP 131 Query: 136 EYMRLMRKRTKQAGVTILDHSPALELLVEDDGSVAGASGMCRQKHDRWIVRAKAVVIATG 195 EYMRLMR++T++A V ILDHSPALELLV+D G+VAGA+G+ RQ+ D W+VRAK+V++ATG Sbjct: 132 EYMRLMRRQTQEASVLILDHSPALELLVDDTGAVAGATGLRRQRGDNWVVRAKSVIMATG 191 Query: 196 GCAFLSKTLGSNVLTGDGYLMAAEVGAEFSSMEFSNPYAISPAFGSVTKTLFYGWATFSY 255 GCAFLSK LG N+LTGDGYLMAAE GA+ S MEFSN YAIS +F SVTKTLFY WA+F+Y Sbjct: 192 GCAFLSKALGCNLLTGDGYLMAAEAGADLSGMEFSNAYAISASFSSVTKTLFYKWASFTY 251 Query: 256 EDGSVVPGAASKGGRSAIARALLQGPVYARLDKADDDVQRHMRASQPNFFLPFDRTGIDP 315 E+G ++PGA S+GGRSAIARAL+ GPVYA+LD+ + +Q +R +QPNFFLPFDR GI+P Sbjct: 252 ENGEIIPGAGSQGGRSAIARALMVGPVYAQLDQVEPGMQATLRLAQPNFFLPFDRVGINP 311 Query: 316 FRERFPVTLRLEGTVRGTGGLRIVDDSCATSVPGLYAAGDAATRELICGGFTGGGSHNAA 375 F +RFP+TL LEGTVRGTGGLRI D++CATSV GL+AAGDAATRELICGGFTGGGSHNAA Sbjct: 312 FTQRFPITLLLEGTVRGTGGLRITDETCATSVAGLFAAGDAATRELICGGFTGGGSHNAA 371 Query: 376 WAMSSGTWAGSGAAGYARQLGPARQRRLVSAGTVAFRSRAGRAFEPAALAKAVQDEVYPY 435 WAMSSG WAG+ AA +A+QLG +R++ AG VA RSR +F P KAVQDEV+P+ Sbjct: 372 WAMSSGYWAGAAAADHAKQLGTTTKRQVFRAGGVALRSRTKASFNPNETTKAVQDEVFPF 431 Query: 436 ELNYFRHASRLEGALARLDAEWSDASAADAASKDDLLRARESAAMLATSRWMYRSALARN 495 + NYFR A +L +L RL+ W + ADAA +D +LRARE AAM+AT+RWMYRSALAR Sbjct: 432 KRNYFRTADQLVPSLDRLNKLWQTINHADAADRDQVLRARECAAMIATARWMYRSALARQ 491 Query: 496 ESRGMHRRDDYPDQDDRQRHYVTSGGLDEVWTTVRP 531 ESRGMHRR+++P QD +Q HY+T+GGLD+VWT RP Sbjct: 492 ESRGMHRREEFPHQDHKQHHYITTGGLDDVWTGTRP 527 >ref|ZP_06305808.1| Glucose-inhibited division protein A [Raphidiopsis brookii D9] gb|EFA72194.1| Glucose-inhibited division protein A [Raphidiopsis brookii D9] Length = 544 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/521 (65%), Positives = 399/521 (76%), Gaps = 6/521 (1%) Query: 22 ADVLVIGGGPAGTWAAVSAAERGARVVLADKGFCGTSGATAAAGTGVWYVDPNPALREAA 81 ADVLVIGGGPAG WAA SAA GA+VVL DKG+CGTSG AAAG GVWYV P P REAA Sbjct: 22 ADVLVIGGGPAGAWAAWSAANAGAKVVLVDKGYCGTSGCAAAAGNGVWYVPPEPESREAA 81 Query: 82 MANREKMGGHLQDRRWMARVLDQTYEDSNRLAAWGYPYPVDDSGKSQRNSLQGPEYMRLM 141 MA+RE +GG L R WM RVLDQTY + N+LA WGYP+P D+ GKS R SLQGPEYMRLM Sbjct: 82 MASRESLGGFLSLRDWMERVLDQTYTNVNQLADWGYPFPTDEEGKSYRRSLQGPEYMRLM 141 Query: 142 RKRTKQAGVTILDHSPALELLVEDDGSVAGASGMCRQKHDRWIVRAKAVVIATGGCAFLS 201 RK+ KQAGV ILDHSPAL+LLV+ +G+VAG+ G+ RQ + WIVR+ AVVIATGGCAFLS Sbjct: 142 RKKVKQAGVKILDHSPALQLLVDKEGAVAGSRGINRQTGENWIVRSHAVVIATGGCAFLS 201 Query: 202 KTLGSNVLTGDGYLMAAEVGAEFSSMEFSNPYAISPAFGSVTKTLFYGWATFSYEDGSVV 261 K LG NVLTGDGYLMAAE+GAE S MEFSN YAI+PAF SVTKTLFY WA+F+YEDG+++ Sbjct: 202 KALGCNVLTGDGYLMAAEMGAEMSGMEFSNAYAIAPAFSSVTKTLFYNWASFTYEDGTLI 261 Query: 262 PGAASKGGRSAIARALLQGPVYARLDKADDDVQRHMRASQPNFFLPFDRTGIDPFRERFP 321 PGA S+ GRS IA+ LL PVYA +DKA + ++ MR SQPNFFLPFDR GIDPF +RFP Sbjct: 262 PGAGSQKGRSVIAQTLLTQPVYAIIDKASEQMRSTMRLSQPNFFLPFDRLGIDPFTQRFP 321 Query: 322 VTLRLEGTVRGTGGLRIVDDSCATSVPGLYAAGDAATRELICGGFTGGGSHNAAWAMSSG 381 VTLRLEGTVRGTGG+RI D +CATSVPGLYAAGDAATRELICGGFTGGGSHNAAWA+SSG Sbjct: 322 VTLRLEGTVRGTGGIRITDYTCATSVPGLYAAGDAATRELICGGFTGGGSHNAAWALSSG 381 Query: 382 TWAGSGAAGYARQLGPARQRRLVSAGTVA-FRSRAGRAFEPAALAKAVQDEVYPYELNYF 440 WAG AA Y++ +G A R V A S + E + KA Q EV+PY NYF Sbjct: 382 YWAGKFAAKYSQDMGIAANERYVEFLEGAGLTSGSSNQVESEEIVKATQAEVFPYNRNYF 441 Query: 441 RHASRLEGALARLDAEWSDASAADAASKDDLLRARESAAMLATSRWMYRSALARNESRGM 500 R+ L +L +LD+ W + AS ++LLR RE+AAM+AT+RWMY SAL R E+RGM Sbjct: 442 RNEEGLTTSLGKLDSLWKAIRQGEVASNNNLLRTREAAAMVATARWMYSSALERRETRGM 501 Query: 501 HRRDDYPDQDDRQRHYVTSGGLDEVWTT-----VRPHADAS 536 HRR DYP+ D Q+H++ SGGLD+VW +R H D + Sbjct: 502 HRRQDYPELDAAQQHHLISGGLDQVWVKSITIPMRTHLDKT 542 >ref|YP_325492.1| glucose-inhibited division protein A [Anabaena variabilis ATCC 29413] gb|ABA24597.1| Glucose-inhibited division protein A [Anabaena variabilis ATCC 29413] Length = 535 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/518 (63%), Positives = 389/518 (75%), Gaps = 4/518 (0%) Query: 18 VEFDADVLVIGGGPAGTWAAVSAAERGARVVLADKGFCGTSGATAAAGTGVWYVDPNPAL 77 ++ DVL+IGGGPAGTWAA SAA GA+VVL DKG+CGTSGA AA+G GVWYV P+P Sbjct: 10 IDLITDVLIIGGGPAGTWAAWSAATSGAKVVLVDKGYCGTSGAAAASGNGVWYVPPDPEQ 69 Query: 78 REAAMANREKMGGHLQDRRWMARVLDQTYEDSNRLAAWGYPYPVDDSGKSQRNSLQGPEY 137 REAAMA+RE MGG L DR WM RVLD+TY++ N LA GYP+ VD GK R SLQGP+Y Sbjct: 70 REAAMASREAMGGFLADRHWMTRVLDRTYDNINSLADEGYPFSVDADGKVIRRSLQGPDY 129 Query: 138 MRLMRKRTKQAGVTILDHSPALELLVEDDGSVAGASGMCRQKHDRWIVRAKAVVIATGGC 197 MR MR++ KQAGV ILDHSPALELLV+ +GSVAGA G+ RQ +RW VR+KAVVIATGGC Sbjct: 130 MRFMRRKIKQAGVKILDHSPALELLVDIEGSVAGAKGINRQSGERWTVRSKAVVIATGGC 189 Query: 198 AFLSKTLGSNVLTGDGYLMAAEVGAEFSSMEFSNPYAISPAFGSVTKTLFYGWATFSYED 257 AFLSK LG NVLTGDG LMAAE GA+FS MEFSN YAISPAF SVTKT +Y WA+F+YED Sbjct: 190 AFLSKALGCNVLTGDGLLMAAEAGADFSGMEFSNAYAISPAFSSVTKTRYYDWASFTYED 249 Query: 258 GSVVPGAASKGGRSAIARALLQGPVYARLDK-ADDDVQRHMRASQPNFFLPFDRTGIDPF 316 G+V+ GA SK GRS IA+ LL PVYA LD+ D+ + MRASQPNFF+PFDR GIDPF Sbjct: 250 GTVIEGAGSKHGRSVIAKTLLTQPVYACLDQNMDEQTKAWMRASQPNFFVPFDRAGIDPF 309 Query: 317 RERFPVTLRLEGTVRGTGGLRIVDDSCATSVPGLYAAGDAATRELICGGFTGGGSHNAAW 376 +RFPVTLRLEGTVRGTGG+RI D +CATSV GLYAAGDAATRELICGGFTGGGSHNAAW Sbjct: 310 TQRFPVTLRLEGTVRGTGGIRIADYTCATSVNGLYAAGDAATRELICGGFTGGGSHNAAW 369 Query: 377 AMSSGTWAGSGAAGYARQLGP-ARQRRLVSAGTVAFRSRAGRAFEPAALAKAVQDEVYPY 435 AMSSG W+G AA YA LG A QR + G F P + Q EV+PY Sbjct: 370 AMSSGYWSGQSAANYALSLGEYASQRSVQGVGEAGLHGEGNGTFSPDEAIASTQAEVFPY 429 Query: 436 ELNYFRHASRLEGALARLDAEWSDASAADAASKDDLLRARESAAMLATSRWMYRSALARN 495 + N FR A+ L +L RLD W + + ++R+RE+AAM+AT+RWMY S L R Sbjct: 430 DRNLFRTATSLSASLERLDDLWQEIRNSHTPDDQQIVRSREAAAMVATARWMYNSGLQRQ 489 Query: 496 ESRGMHRRDDYPDQDDRQRHYVTSGGLDEVWTTVRPHA 533 E+RGMH+R DYP QD Q++ + SGGLD++W V+P + Sbjct: 490 ETRGMHKRMDYPQQDPNQQYRLLSGGLDKIW--VKPES 525 >ref|ZP_06308932.1| Glucose-inhibited division protein A [Cylindrospermopsis raciborskii CS-505] gb|EFA69054.1| Glucose-inhibited division protein A [Cylindrospermopsis raciborskii CS-505] Length = 533 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/516 (64%), Positives = 396/516 (76%), Gaps = 1/516 (0%) Query: 17 SVEFDADVLVIGGGPAGTWAAVSAAERGARVVLADKGFCGTSGATAAAGTGVWYVDPNPA 76 S+ ADVLVIGGGPAG WAA SA GA+VVL DKG+CGTSG AAAG GVWYV P P Sbjct: 6 SINLTADVLVIGGGPAGAWAAWSAVNAGAKVVLVDKGYCGTSGCAAAAGNGVWYVPPEPE 65 Query: 77 LREAAMANREKMGGHLQDRRWMARVLDQTYEDSNRLAAWGYPYPVDDSGKSQRNSLQGPE 136 REAAMA+RE +GG L R WM RVL+QTY + N+LA WGYP+PVD+ G+ R SLQGPE Sbjct: 66 SREAAMASREALGGFLSQRDWMHRVLEQTYANVNQLAEWGYPFPVDEEGRPYRRSLQGPE 125 Query: 137 YMRLMRKRTKQAGVTILDHSPALELLVEDDGSVAGASGMCRQKHDRWIVRAKAVVIATGG 196 YMRLMR++ KQAGV ILDHSPAL+LLV+ +GSVAGA G+ RQ ++W+V++ +VVIATGG Sbjct: 126 YMRLMRRKIKQAGVKILDHSPALQLLVDSEGSVAGAGGINRQHGEKWVVQSHSVVIATGG 185 Query: 197 CAFLSKTLGSNVLTGDGYLMAAEVGAEFSSMEFSNPYAISPAFGSVTKTLFYGWATFSYE 256 CAFLSK LG NVLTGDGYLMAAEVGAE S MEFSN YAI+PAF SVTKTLFY WATF+YE Sbjct: 186 CAFLSKALGCNVLTGDGYLMAAEVGAEMSGMEFSNAYAIAPAFSSVTKTLFYNWATFTYE 245 Query: 257 DGSVVPGAASKGGRSAIARALLQGPVYARLDKADDDVQRHMRASQPNFFLPFDRTGIDPF 316 DG+ +PGA S+ GRS IA+ LL PVYA LDKA +++Q MR SQPNFFLPFDR GIDPF Sbjct: 246 DGTPIPGAGSQKGRSVIAQTLLTQPVYAILDKASEEMQTTMRLSQPNFFLPFDRGGIDPF 305 Query: 317 RERFPVTLRLEGTVRGTGGLRIVDDSCATSVPGLYAAGDAATRELICGGFTGGGSHNAAW 376 +RFPVTLRLEGTVRGTGG+RI D +CATSV GLYAAGDAATRELICGGFTGGGSHNAAW Sbjct: 306 TQRFPVTLRLEGTVRGTGGIRITDYTCATSVGGLYAAGDAATRELICGGFTGGGSHNAAW 365 Query: 377 AMSSGTWAGSGAAGYARQLG-PARQRRLVSAGTVAFRSRAGRAFEPAALAKAVQDEVYPY 435 A+SSG WAG AA YA++ G QR++ G S G+ + +A Q EV+PY Sbjct: 366 ALSSGYWAGKSAAEYAQESGISVNQRKVDFVGGAGLTSGGGQQINSEEIIQATQAEVFPY 425 Query: 436 ELNYFRHASRLEGALARLDAEWSDASAADAASKDDLLRARESAAMLATSRWMYRSALARN 495 + NYFR+ L G+L RL++ W++ + A +++R RE+ +M+AT+RWMY SAL R Sbjct: 426 DRNYFRNEKGLIGSLERLNSLWNEIRGSKIADNSNIVRVREAVSMVATARWMYSSALERK 485 Query: 496 ESRGMHRRDDYPDQDDRQRHYVTSGGLDEVWTTVRP 531 E+RGMH+ DYPD D Q+H++ SGGLD VW P Sbjct: 486 ETRGMHKHQDYPDLDTNQQHHLVSGGLDRVWVKSVP 521