BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0052.p (347 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206802.1| aliphatic sulfonate ABC transporter substrat... 465 e-129 ref|YP_001239197.1| ABC transporter substrate-binding protein [B... 460 e-127 ref|YP_782120.1| aliphatic sulfonate ABC transporter periplasmic... 456 e-126 ref|YP_002363547.1| aliphatic sulfonates family ABC transporter,... 411 e-113 ref|YP_002964627.1| alkanesulfonate transport protein, periplasm... 393 e-107 >ref|YP_001206802.1| aliphatic sulfonate ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL78585.1| Putative ABC transporter, substrate-binding protein; putative aliphatic sulphonates transporter [Bradyrhizobium sp. ORS 278] Length = 309 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 237/305 (77%), Positives = 257/305 (84%) Query: 41 IGLLAMTSLIRPAAAEEMRIGYQKSSTLTAILKTNGALEKALAPLGITVSWHEFTSGLPL 100 I LL + R AAE +RIGYQKSSTL A+LKTNG LEKALAPL I VSWHEF+SGLPL Sbjct: 3 IALLGALATSRAEAAETLRIGYQKSSTLIALLKTNGELEKALAPLDIKVSWHEFSSGLPL 62 Query: 101 LEAINVGSIDFGADVADTVPIFAQAAGAKLAYVAEEAASPSAQAILVPKESAIRSPADLK 160 LEAIN+GSID GADVADTVP+FAQAAGAKLAYVAEEAASPSAQAILV S +S A+LK Sbjct: 63 LEAINIGSIDVGADVADTVPVFAQAAGAKLAYVAEEAASPSAQAILVATASPTKSLAELK 122 Query: 161 GKKVAVTKGAGSHFLLLAVLAKAGLSFKDITPAYLTPADGRAAFVSGNVDAWVAWDPFLS 220 GKK+AVTKGAGSH+LLL+ LAKAGLSFKDITPAYL PADGR AFVS NVDAWVAWDPFLS Sbjct: 123 GKKIAVTKGAGSHYLLLSALAKAGLSFKDITPAYLPPADGRTAFVSNNVDAWVAWDPFLS 182 Query: 221 SAQRQSGARILTDGSGGLASYKRYYLASAAFAEKRADALNAIFARLVETGTWVKANPNEA 280 S RQSGAR+L DGS GLASYKRYYLASA +A K ADALN I+ +LVETG WVKANP A Sbjct: 183 STIRQSGARVLADGSDGLASYKRYYLASADYAGKHADALNVIYGKLVETGKWVKANPAAA 242 Query: 281 AALLAGLWGIDAATVEEANSHRSYKVGVVSAAGLSEQQRIADTFTAEGLLPRKVDTGDVK 340 A+ LA LWGIDAATVEEANSHRSY VG V+AAGLSEQQ+IAD F AE +LP KVDT + Sbjct: 243 ASQLATLWGIDAATVEEANSHRSYLVGPVTAAGLSEQQKIADAFLAERVLPVKVDTSALA 302 Query: 341 IWAPK 345 IW PK Sbjct: 303 IWTPK 307 >ref|YP_001239197.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ35291.1| Putative ABC transporter, substrate-binding protein [Bradyrhizobium sp. BTAi1] Length = 309 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/290 (78%), Positives = 251/290 (86%) Query: 56 EEMRIGYQKSSTLTAILKTNGALEKALAPLGITVSWHEFTSGLPLLEAINVGSIDFGADV 115 E +RIGYQKSSTL A+LKTNG LEKALAPL I VSWHEF+SGLPLLEAIN+GSID GADV Sbjct: 18 ETLRIGYQKSSTLIALLKTNGELEKALAPLDIKVSWHEFSSGLPLLEAINIGSIDVGADV 77 Query: 116 ADTVPIFAQAAGAKLAYVAEEAASPSAQAILVPKESAIRSPADLKGKKVAVTKGAGSHFL 175 ADTVP+FAQAAGAK+AYVAEEAASPSAQAILV S I+S A+LKG+K+AVTKGAGSH+L Sbjct: 78 ADTVPVFAQAAGAKIAYVAEEAASPSAQAILVSTASPIKSLAELKGRKIAVTKGAGSHYL 137 Query: 176 LLAVLAKAGLSFKDITPAYLTPADGRAAFVSGNVDAWVAWDPFLSSAQRQSGARILTDGS 235 LL+ LAKAGL+FKDITPAYL PADGR AFVS NVDAWVAWDPFL+S RQSGAR+LTDGS Sbjct: 138 LLSALAKAGLTFKDITPAYLPPADGRTAFVSNNVDAWVAWDPFLTSTIRQSGARVLTDGS 197 Query: 236 GGLASYKRYYLASAAFAEKRADALNAIFARLVETGTWVKANPNEAAALLAGLWGIDAATV 295 GLASYKRYYLASA +A KR D LN I+ +LVETG WVKANP AA LA LWGIDAATV Sbjct: 198 DGLASYKRYYLASADYAAKRGDVLNIIYGKLVETGKWVKANPAAAANQLATLWGIDAATV 257 Query: 296 EEANSHRSYKVGVVSAAGLSEQQRIADTFTAEGLLPRKVDTGDVKIWAPK 345 EEANSHRSY+VG V+AAGLSEQQ+IAD F AE +LP KVDT + IW PK Sbjct: 258 EEANSHRSYQVGTVTAAGLSEQQKIADAFLAERVLPAKVDTSALAIWTPK 307 >ref|YP_782120.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Rhodopseudomonas palustris BisA53] gb|ABJ07140.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Rhodopseudomonas palustris BisA53] Length = 322 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 226/312 (72%), Positives = 259/312 (83%), Gaps = 1/312 (0%) Query: 36 LAVAAIGLLAMTSLIRPAAAEEMRIGYQKSSTLTAILKTNGALEKALAPLGITVSWHEFT 95 LA++A GL +L + +A E +RIGYQ+SSTL AILK+NG LEKALAPLG+ VSWHEFT Sbjct: 12 LAISAFGLFGPAALAQ-SAPEPVRIGYQRSSTLIAILKSNGELEKALAPLGVKVSWHEFT 70 Query: 96 SGLPLLEAINVGSIDFGADVADTVPIFAQAAGAKLAYVAEEAASPSAQAILVPKESAIRS 155 SGLPLLE+INVG+IDFGADVADTVPIFAQAAGA+LAYVAEE ASPSAQAILV ++S I++ Sbjct: 71 SGLPLLESINVGNIDFGADVADTVPIFAQAAGAQLAYVAEERASPSAQAILVGEKSPIQT 130 Query: 156 PADLKGKKVAVTKGAGSHFLLLAVLAKAGLSFKDITPAYLTPADGRAAFVSGNVDAWVAW 215 +DLKGK++AVTKGAGSH+LLLA LAK GLSFKDI+PAYL P DGRAAFVS NVDAWVAW Sbjct: 131 LSDLKGKRIAVTKGAGSHYLLLAALAKGGLSFKDISPAYLAPGDGRAAFVSNNVDAWVAW 190 Query: 216 DPFLSSAQRQSGARILTDGSGGLASYKRYYLASAAFAEKRADALNAIFARLVETGTWVKA 275 DPF +S + Q+ ARIL DGSGGLASYKRYYL SA FAEKR+D LN I+ +LVETG WVKA Sbjct: 191 DPFFTSTRHQTNARILADGSGGLASYKRYYLTSATFAEKRSDVLNVIYRKLVETGRWVKA 250 Query: 276 NPNEAAALLAGLWGIDAATVEEANSHRSYKVGVVSAAGLSEQQRIADTFTAEGLLPRKVD 335 NP +AA LLA LW I VEEAN HRSY V V+ GLSEQQ+IAD F AEGL+P KV Sbjct: 251 NPKDAAELLAKLWSIAPEIVEEANGHRSYAVEHVTQDGLSEQQKIADVFHAEGLIPAKVK 310 Query: 336 TGDVKIWAPKGS 347 T VKIW P+G+ Sbjct: 311 TDTVKIWTPRGT 322 >ref|YP_002363547.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Methylocella silvestris BL2] gb|ACK52185.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Methylocella silvestris BL2] Length = 327 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 198/285 (69%), Positives = 234/285 (82%), Gaps = 1/285 (0%) Query: 58 MRIGYQKSSTLTAILKTNGALEKALAPLGITVSWHEFTSGLPLLEAINVGSIDFGADVAD 117 + GYQKSSTL+ ILKTNG LEKALAPLG+ + WHEFTSGLPL+EA+N+G +DF ADVAD Sbjct: 39 LNFGYQKSSTLSVILKTNGELEKALAPLGVEIKWHEFTSGLPLVEALNLGHLDFSADVAD 98 Query: 118 TVPIFAQAAGAKLAYVAEEAASPSAQAILVPKESAIRSPADLKGKKVAVTKGAGSHFLLL 177 TVPIFAQAAGAKL YVA+EAASP A+AILVP S I++ DL+G+K+AVTK AGSHFLLL Sbjct: 99 TVPIFAQAAGAKLVYVADEAASPGAEAILVPAASDIKTLGDLRGRKIAVTKAAGSHFLLL 158 Query: 178 AVLAKAGLSFKDITPAYLTPADGRAAFVSGNVDAWVAWDPFLSSAQRQSGARILTDGSGG 237 A L KAGL+F+DI+PAYL P DGRAAF+ G VDAWV WDPFL+SA+ + G+R+L D + G Sbjct: 159 AALQKAGLTFRDISPAYLAPGDGRAAFIGGKVDAWVIWDPFLTSARLKEGSRVLAD-AAG 217 Query: 238 LASYKRYYLASAAFAEKRADALNAIFARLVETGTWVKANPNEAAALLAGLWGIDAATVEE 297 LASYKRYYLAS F DAL +FA+L ETG WVK++P EAAALL+G+W IDAA VEE Sbjct: 218 LASYKRYYLASDGFVANHGDALKIVFAKLQETGLWVKSHPAEAAALLSGIWNIDAAAVEE 277 Query: 298 ANSHRSYKVGVVSAAGLSEQQRIADTFTAEGLLPRKVDTGDVKIW 342 ANSHRSY VG+V+ GL+EQQ IAD FT EGL+P K+D DVKIW Sbjct: 278 ANSHRSYAVGLVTREGLTEQQIIADAFTREGLIPAKLDASDVKIW 322 >ref|YP_002964627.1| alkanesulfonate transport protein, periplasmic-binding subunit, ABC superfamily [methylobacterium extorquens AM1] gb|ACS41350.1| alkanesulfonate transport protein, periplasmic-binding subunit, ABC superfamily [Methylobacterium extorquens AM1] Length = 320 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 202/316 (63%), Positives = 245/316 (77%), Gaps = 6/316 (1%) Query: 32 MSRRLAVAAI--GL-LAMTSLIRPAAAEE--MRIGYQKSSTLTAILKTNGALEKALAPLG 86 M+RR A + GL L++ PAAAEE +RIGYQ+SS L ++L+ + LE AL PLG Sbjct: 1 MNRRSAARLVLAGLTLSLALGCNPAAAEESTLRIGYQRSSALISLLREDATLETALKPLG 60 Query: 87 ITVSWHEFTSGLPLLEAINVGSIDFGADVADTVPIFAQAAGAKLAYVAEEAASPSAQAIL 146 +TVSWHEFTSGLP++EA+NVG ID ADVADTVP+FAQAA AK+ Y+A+EAASP AQAIL Sbjct: 61 VTVSWHEFTSGLPIMEALNVGRIDVSADVADTVPVFAQAANAKITYIAQEAASPEAQAIL 120 Query: 147 VPKESAIRSPADLKGKKVAVTKGAGSHFLLLAVLAKAGLSFKDITPAYLTPADGRAAFVS 206 VP +S +++ ADLKG+KVAVTKGAGSH+LLLA L GL FK I PAYLTPADGR+A Sbjct: 121 VPGDSPLKTVADLKGRKVAVTKGAGSHYLLLAALKAEGLPFKSINPAYLTPADGRSALSG 180 Query: 207 GNVDAWVAWDPFLSSAQRQSGARILTDGSGGLASYKRYYLASAAFAEKRADALNAIFARL 266 G+VDAWVAWDPFLS+AQ Q+GARIL DG+ GL++YKRYYLAS A+AEKRAD L + +L Sbjct: 181 GSVDAWVAWDPFLSAAQIQAGARILRDGT-GLSAYKRYYLASDAYAEKRADVLTLLVTKL 239 Query: 267 VETGTWVKANPNEAAALLAGLWGIDAATVEEANSHRSYKVGVVSAAGLSEQQRIADTFTA 326 E GTWVKANP+ AAA L LW I+ V++AN+ RSY+V VS AGL+EQQ IAD F A Sbjct: 240 REAGTWVKANPDAAAARLGALWKIEPEIVKQANARRSYRVEPVSRAGLAEQQTIADAFRA 299 Query: 327 EGLLPRKVDTGDVKIW 342 EGLLPR VD + +W Sbjct: 300 EGLLPRAVDASALPVW 315