BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0050.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239295.1| D-methionine ABC transporter protein, peripl... 446 e-123 ref|YP_001206259.1| D-methionine ABC transporter protein, peripl... 432 e-119 ref|YP_530459.1| lipoprotein YaeC [Rhodopseudomonas palustris Bi... 413 e-113 ref|YP_570349.1| lipoprotein YaeC [Rhodopseudomonas palustris Bi... 399 e-109 ref|YP_782097.1| YaeC family lipoprotein [Rhodopseudomonas palus... 392 e-107 >ref|YP_001239295.1| D-methionine ABC transporter protein, periplasmic binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ35389.1| D-methionine ABC transporter protein, periplasmic binding protein [Bradyrhizobium sp. BTAi1] Length = 258 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/258 (84%), Positives = 235/258 (91%) Query: 2 MRILMTAVAAVTLLVGTARAETVRVGVTAGPHAEILEVVKKVAAGHGFDIKVVEFTDYVI 61 MR+ + A+AA+ L+ RAET+RVGVTAGPHAEIL+VVKKV A G DIKVVEFTDYVI Sbjct: 1 MRLPVVALAALVSLLTPVRAETIRVGVTAGPHAEILDVVKKVGAERGLDIKVVEFTDYVI 60 Query: 62 PNHALALGDLEANSFQHEPYLKNQISKTGWKIVKVATTIASPQGVYSLKYKKLADLPDGA 121 PN ALAL DLEANSFQHEPYLKNQI+KTGWKIVKVATTIASPQGVYS KYK LA+LP+GA Sbjct: 61 PNQALALKDLEANSFQHEPYLKNQIAKTGWKIVKVATTIASPQGVYSQKYKSLAELPEGA 120 Query: 122 RVAIANDPSNGARGLMILALHGVIKLKDPNNVASTIADITDNPKHLRFVELDAAQLPRSL 181 RVAIANDPSNGARGLMILALHGVIKLKDPNNVA+T+ADITDNPK L+FVELDAAQLPR+L Sbjct: 121 RVAIANDPSNGARGLMILALHGVIKLKDPNNVAATVADITDNPKKLKFVELDAAQLPRAL 180 Query: 182 QDVDLVSINNNYAVQAGLNPATDAIAREAADGPWVNIIAVREADKDKPWVKQLIDAYHSE 241 DVDLVSINNNYAVQAGLNPA DAIARE A+GPWVNI+AVRE DKDKPWVKQLI+AY SE Sbjct: 181 ADVDLVSINNNYAVQAGLNPAKDAIARENAEGPWVNILAVREDDKDKPWVKQLIEAYQSE 240 Query: 242 EVKAFLEKRFKGTYIATW 259 VKAFLE RFKGTYIATW Sbjct: 241 PVKAFLETRFKGTYIATW 258 >ref|YP_001206259.1| D-methionine ABC transporter protein, periplasmic binding protein [Bradyrhizobium sp. ORS 278] emb|CAL78034.1| D-methionine ABC transporter protein, periplasmic binding protein [Bradyrhizobium sp. ORS 278] Length = 258 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 211/241 (87%), Positives = 225/241 (93%) Query: 19 ARAETVRVGVTAGPHAEILEVVKKVAAGHGFDIKVVEFTDYVIPNHALALGDLEANSFQH 78 A AET+RVGVTAGPHAEI++VVKKVAA G DIKVVEFTDYVIPN ALAL DLEANSFQH Sbjct: 18 AHAETIRVGVTAGPHAEIIDVVKKVAAERGLDIKVVEFTDYVIPNQALALKDLEANSFQH 77 Query: 79 EPYLKNQISKTGWKIVKVATTIASPQGVYSLKYKKLADLPDGARVAIANDPSNGARGLMI 138 EPYLKNQISKTGWKIVKVATTIASPQGVYS KYK LA+LP+GA+VAIANDPSNGARGLMI Sbjct: 78 EPYLKNQISKTGWKIVKVATTIASPQGVYSQKYKTLAELPEGAKVAIANDPSNGARGLMI 137 Query: 139 LALHGVIKLKDPNNVASTIADITDNPKHLRFVELDAAQLPRSLQDVDLVSINNNYAVQAG 198 LALHGVIKLKDP NVAST+ADITDNPK L+FVELDAAQLPR+L DVDLVSINNNYAVQAG Sbjct: 138 LALHGVIKLKDPGNVASTVADITDNPKKLKFVELDAAQLPRALADVDLVSINNNYAVQAG 197 Query: 199 LNPATDAIAREAADGPWVNIIAVREADKDKPWVKQLIDAYHSEEVKAFLEKRFKGTYIAT 258 LNPA DAIARE A+GPWVNI+AVRE DKDKPWVK+LI+AYHSE VKAFL+ RFKGTYIAT Sbjct: 198 LNPAKDAIARENAEGPWVNILAVREEDKDKPWVKRLIEAYHSEPVKAFLDTRFKGTYIAT 257 Query: 259 W 259 W Sbjct: 258 W 258 >ref|YP_530459.1| lipoprotein YaeC [Rhodopseudomonas palustris BisB18] gb|ABD86140.1| Lipoprotein YaeC [Rhodopseudomonas palustris BisB18] Length = 258 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 197/258 (76%), Positives = 223/258 (86%) Query: 2 MRILMTAVAAVTLLVGTARAETVRVGVTAGPHAEILEVVKKVAAGHGFDIKVVEFTDYVI 61 MR+L ++ A+ L+G+A+AET+RVGVTAGPHAEI++VV+KVAA G DIKVVEFTDYV+ Sbjct: 1 MRLLTASLVAIAALIGSAQAETIRVGVTAGPHAEIIDVVRKVAAERGLDIKVVEFTDYVV 60 Query: 62 PNHALALGDLEANSFQHEPYLKNQISKTGWKIVKVATTIASPQGVYSLKYKKLADLPDGA 121 PN ALA DLEANSFQHEPYLKNQISKT WKIVKV TI SPQGVYS KYK LADLP GA Sbjct: 61 PNQALAQKDLEANSFQHEPYLKNQISKTNWKIVKVGNTIISPQGVYSTKYKTLADLPTGA 120 Query: 122 RVAIANDPSNGARGLMILALHGVIKLKDPNNVASTIADITDNPKHLRFVELDAAQLPRSL 181 +VAIANDPSNGARGL+ILA +G+IKLKDP+N A+++ADI +NPK LRFVELDAAQLPRSL Sbjct: 121 KVAIANDPSNGARGLLILAQNGLIKLKDPSNTAASVADIAENPKKLRFVELDAAQLPRSL 180 Query: 182 QDVDLVSINNNYAVQAGLNPATDAIAREAADGPWVNIIAVREADKDKPWVKQLIDAYHSE 241 DVDLVSINNNYAVQAGLNP TD IA E GPWVNI+AVRE DKDKPWVKQLI+AYHS Sbjct: 181 PDVDLVSINNNYAVQAGLNPVTDPIAHETPGGPWVNILAVREEDKDKPWVKQLIEAYHSA 240 Query: 242 EVKAFLEKRFKGTYIATW 259 V+ F+E RFKGTY+A W Sbjct: 241 PVRQFIETRFKGTYLAAW 258 >ref|YP_570349.1| lipoprotein YaeC [Rhodopseudomonas palustris BisB5] gb|ABE40448.1| Lipoprotein YaeC [Rhodopseudomonas palustris BisB5] Length = 257 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/238 (80%), Positives = 208/238 (87%) Query: 22 ETVRVGVTAGPHAEILEVVKKVAAGHGFDIKVVEFTDYVIPNHALALGDLEANSFQHEPY 81 ET+RVGVTAGPHAEI +VVKKVAA G D+K +EFTDYV+PN ALA D+EANSFQHEPY Sbjct: 20 ETIRVGVTAGPHAEIFDVVKKVAAERGLDLKPIEFTDYVVPNQALAQKDIEANSFQHEPY 79 Query: 82 LKNQISKTGWKIVKVATTIASPQGVYSLKYKKLADLPDGARVAIANDPSNGARGLMILAL 141 LKNQ+SKT WKIVKVA TIASPQGVYS+KYK LADLP GA VAIANDPSNGARGL+ILAL Sbjct: 80 LKNQVSKTNWKIVKVANTIASPQGVYSVKYKSLADLPQGATVAIANDPSNGARGLLILAL 139 Query: 142 HGVIKLKDPNNVASTIADITDNPKHLRFVELDAAQLPRSLQDVDLVSINNNYAVQAGLNP 201 HG IKLKD +++ADI DNPK L+FVELDAAQLPRSLQDVDLVSINNNYAVQAGLNP Sbjct: 140 HGAIKLKDGAGATASVADIVDNPKKLKFVELDAAQLPRSLQDVDLVSINNNYAVQAGLNP 199 Query: 202 ATDAIAREAADGPWVNIIAVREADKDKPWVKQLIDAYHSEEVKAFLEKRFKGTYIATW 259 A DAIARE +GPWVNIIAVRE DKDKPWVKQL+DAYHS+ VK F+E RFKGTYI W Sbjct: 200 AKDAIARENVEGPWVNIIAVREEDKDKPWVKQLVDAYHSDPVKQFVETRFKGTYIPAW 257 >ref|YP_782097.1| YaeC family lipoprotein [Rhodopseudomonas palustris BisA53] gb|ABJ07117.1| lipoprotein, YaeC family [Rhodopseudomonas palustris BisA53] Length = 257 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 188/238 (78%), Positives = 208/238 (87%) Query: 22 ETVRVGVTAGPHAEILEVVKKVAAGHGFDIKVVEFTDYVIPNHALALGDLEANSFQHEPY 81 ET+R+GVTAGPHAEI++VVKKVAA G D+K +EFTDYV+PN AL +LE NSFQHEPY Sbjct: 20 ETIRIGVTAGPHAEIIDVVKKVAAERGLDLKPIEFTDYVVPNQALVQKELEVNSFQHEPY 79 Query: 82 LKNQISKTGWKIVKVATTIASPQGVYSLKYKKLADLPDGARVAIANDPSNGARGLMILAL 141 LKNQI+KT WKIVKVA TIASPQGVYS+KYK LA+LP GA VAIANDPSNGARGL+ILAL Sbjct: 80 LKNQIAKTNWKIVKVANTIASPQGVYSVKYKTLAELPQGATVAIANDPSNGARGLLILAL 139 Query: 142 HGVIKLKDPNNVASTIADITDNPKHLRFVELDAAQLPRSLQDVDLVSINNNYAVQAGLNP 201 HG IKLKD VA+++ADI DNPK L+FVELDAAQLPRSLQDVDLVSINNNYAVQAGLNP Sbjct: 140 HGAIKLKDGIGVAASVADIVDNPKKLKFVELDAAQLPRSLQDVDLVSINNNYAVQAGLNP 199 Query: 202 ATDAIAREAADGPWVNIIAVREADKDKPWVKQLIDAYHSEEVKAFLEKRFKGTYIATW 259 A DAIARE +GPWVNIIAVRE DKDKPWV+QLI+AYHS VK F+E RFKGTYI W Sbjct: 200 AKDAIAREDVEGPWVNIIAVREEDKDKPWVRQLIEAYHSNPVKQFVETRFKGTYIPAW 257