BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0193.0035.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_781907.1| response regulator receiver protein [Rhodopseud...   248   3e-64
ref|YP_001205506.1| putative two-component response regulator/re...   245   1e-63
ref|NP_770928.1| two-component response regulator [Bradyrhizobiu...   244   3e-63
ref|YP_002288962.1| response regulator receiver protein [Oligotr...   244   3e-63
ref|ZP_07026959.1| response regulator receiver protein [Afipia s...   244   4e-63

>ref|YP_781907.1| response regulator receiver protein [Rhodopseudomonas palustris
           BisA53]
 gb|ABJ06927.1| response regulator receiver protein [Rhodopseudomonas palustris
           BisA53]
          Length = 146

 Score =  248 bits (632), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 126/144 (87%), Positives = 136/144 (94%)

Query: 1   MSDPVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQA 60
           MS PVTIIM+EDDEGHARLIERNIRRSGVNNEI+PFTNGT A++YLFGKDGS  ERKGQA
Sbjct: 1   MSKPVTIIMVEDDEGHARLIERNIRRSGVNNEILPFTNGTAALDYLFGKDGSGHERKGQA 60

Query: 61  LLILLDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPV 120
           LLILLDLNLPDM+GIDIL++VKEN +LK  PVVVLTTTDD+QE+KRCYELGCNVYITKPV
Sbjct: 61  LLILLDLNLPDMSGIDILRKVKENDHLKCAPVVVLTTTDDAQEVKRCYELGCNVYITKPV 120

Query: 121 NYESFANAIRQLGLFFSVIQVPPA 144
           NYESFANAIRQLGLFFSVIQVP A
Sbjct: 121 NYESFANAIRQLGLFFSVIQVPQA 144


>ref|YP_001205506.1| putative two-component response regulator/receiver (CheY-like
           protein) [Bradyrhizobium sp. ORS 278]
 emb|CAL77280.1| putative two-component response regulator/receiver (CheY-like
           protein) [Bradyrhizobium sp. ORS 278]
          Length = 145

 Score =  245 bits (626), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/145 (87%), Positives = 134/145 (92%)

Query: 1   MSDPVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQA 60
           M+ PVTIIMIEDDEGHARLIERNIRRSGVNNEI PFTNGT+AV YL G DG+ +E KG A
Sbjct: 1   MTMPVTIIMIEDDEGHARLIERNIRRSGVNNEIKPFTNGTDAVKYLLGPDGTGLEHKGHA 60

Query: 61  LLILLDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPV 120
           LLILLDLNLPDMTGIDILK VK+N +LKS PVV+LTTTDDSQEIKRCYELGCNVYITKPV
Sbjct: 61  LLILLDLNLPDMTGIDILKMVKQNSFLKSAPVVILTTTDDSQEIKRCYELGCNVYITKPV 120

Query: 121 NYESFANAIRQLGLFFSVIQVPPAA 145
           NYESFANAIRQLGLFFSVIQVPPAA
Sbjct: 121 NYESFANAIRQLGLFFSVIQVPPAA 145


>ref|NP_770928.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC49553.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
          Length = 146

 Score =  244 bits (623), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 124/145 (85%), Positives = 137/145 (94%)

Query: 1   MSDPVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQA 60
           M+ PVTIIMIEDDEGHARLIERNIRRSGVNNEIIPF NGT+A+ +LFG DGS + +KG A
Sbjct: 1   MTQPVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFGNGTDAMRHLFGADGSGLSQKGNA 60

Query: 61  LLILLDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPV 120
           LLILLDLNLPDM+GIDILK++KEN +LK++PVVVLTTTDDSQEIKRCYELGCNVYITKPV
Sbjct: 61  LLILLDLNLPDMSGIDILKQIKENSHLKASPVVVLTTTDDSQEIKRCYELGCNVYITKPV 120

Query: 121 NYESFANAIRQLGLFFSVIQVPPAA 145
           NYE+FANAIRQLGLFFSVIQVPPAA
Sbjct: 121 NYENFANAIRQLGLFFSVIQVPPAA 145


>ref|YP_002288962.1| response regulator receiver protein [Oligotropha carboxidovorans
           OM5]
 ref|YP_004632995.1| response regulator receiver protein [Oligotropha carboxidovorans
           OM5]
 gb|ACI93097.1| response regulator receiver protein [Oligotropha carboxidovorans
           OM5]
 gb|AEI03177.1| response regulator receiver protein [Oligotropha carboxidovorans
           OM4]
 gb|AEI06754.1| response regulator receiver protein [Oligotropha carboxidovorans
           OM5]
          Length = 146

 Score =  244 bits (623), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 125/143 (87%), Positives = 135/143 (94%)

Query: 1   MSDPVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQA 60
           M +PV I+MIEDDEGHARLIERNIRRSGVNNEI+PFTNGT+AV+YLFG DG+A + KGQA
Sbjct: 1   MGNPVKIVMIEDDEGHARLIERNIRRSGVNNEIMPFTNGTDAVSYLFGADGTANQHKGQA 60

Query: 61  LLILLDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPV 120
           LLILLDLNLPDMTGIDILKRVK+N  LKS PVVVLTTTDD+QEIKRCYELGCNVYITKPV
Sbjct: 61  LLILLDLNLPDMTGIDILKRVKDNATLKSAPVVVLTTTDDAQEIKRCYELGCNVYITKPV 120

Query: 121 NYESFANAIRQLGLFFSVIQVPP 143
           NYE+FANAIRQLGLFFSVIQVPP
Sbjct: 121 NYENFANAIRQLGLFFSVIQVPP 143


>ref|ZP_07026959.1| response regulator receiver protein [Afipia sp. 1NLS2]
 gb|EFI51802.1| response regulator receiver protein [Afipia sp. 1NLS2]
          Length = 146

 Score =  244 bits (622), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 125/143 (87%), Positives = 132/143 (92%)

Query: 1   MSDPVTIIMIEDDEGHARLIERNIRRSGVNNEIIPFTNGTEAVNYLFGKDGSAVERKGQA 60
           M  PV I+MIEDDEGHARLIERNIRRSGVNN+IIPF  GTEA+NYLFG DG+A + KGQA
Sbjct: 1   MGSPVKIVMIEDDEGHARLIERNIRRSGVNNDIIPFATGTEAINYLFGADGTADQHKGQA 60

Query: 61  LLILLDLNLPDMTGIDILKRVKENKYLKSTPVVVLTTTDDSQEIKRCYELGCNVYITKPV 120
           LLILLDLNLPDMTGIDILKRVK+N  LKS PVVVLTTTDD+QEIKRCYELGCNVYITKPV
Sbjct: 61  LLILLDLNLPDMTGIDILKRVKDNATLKSAPVVVLTTTDDAQEIKRCYELGCNVYITKPV 120

Query: 121 NYESFANAIRQLGLFFSVIQVPP 143
           NYESFANAIRQLGLFFSVIQVPP
Sbjct: 121 NYESFANAIRQLGLFFSVIQVPP 143