BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0193.0034.p         (156 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770927.1| two-component response regulator [Bradyrhizobiu...   197   4e-49
ref|YP_569559.1| signal transduction histidine kinase [Rhodopseu...   197   5e-49
ref|YP_001240181.1| signal transduction histidine kinase [Bradyr...   194   3e-48
ref|YP_004109391.1| signal transduction histidine kinase [Rhodop...   194   4e-48
ref|YP_001991694.1| signal transduction histidine kinase [Rhodop...   193   7e-48

>ref|NP_770927.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC49552.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
          Length = 371

 Score =  197 bits (502), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/132 (76%), Positives = 111/132 (84%), Gaps = 8/132 (6%)

Query: 1   MTNATPTLLYIDDDAALARLVERGLTRAGYKVVHAASGQEGLDRLG--------QGGIDV 52
           M   TPTLLYIDDD ALARLV+RGLTR GY+VVHAASG+EGL+ +         + GIDV
Sbjct: 1   MNQRTPTLLYIDDDDALARLVDRGLTRRGYRVVHAASGEEGLEHIRRAGAQDSIESGIDV 60

Query: 53  VALDQYMPGLDGLETLEQILKIPDAPPVVFVTASQDSAIAVTALKAGAADYLVKDVRGEF 112
           VALDQYMPGLDGLETLEQI+ IP APPVVFVTASQDS+IAVTALKAGAADYLVKDV+G+F
Sbjct: 61  VALDQYMPGLDGLETLEQIMAIPGAPPVVFVTASQDSSIAVTALKAGAADYLVKDVKGDF 120

Query: 113 IPLLQVAVNGAL 124
           IPLL VA  GAL
Sbjct: 121 IPLLHVAAEGAL 132


>ref|YP_569559.1| signal transduction histidine kinase [Rhodopseudomonas palustris
           BisB5]
 gb|ABE39658.1| signal transduction histidine kinase [Rhodopseudomonas palustris
           BisB5]
          Length = 360

 Score =  197 bits (501), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/151 (70%), Positives = 115/151 (76%), Gaps = 5/151 (3%)

Query: 1   MTNATPTLLYIDDDAALARLVERGLTRAGYKVVHAASGQEGLDRLGQGGIDVVALDQYMP 60
           MT ATPTLLYIDDD AL RLV RGL R G+ V H  SG+ GL+RL +GGIDVVALDQYMP
Sbjct: 1   MTAATPTLLYIDDDEALGRLVSRGLKRQGFCVEHVLSGEAGLERLRKGGIDVVALDQYMP 60

Query: 61  GLDGLETLEQILKIPDAPPVVFVTASQDSAIAVTALKAGAADYLVKDVRGEFIPLLQVAV 120
           GLDGLETLEQI  IPDAPPVVFVTASQDS+IAVTALKAGAADYLVKD +G+F+PLLQVA 
Sbjct: 61  GLDGLETLEQIQNIPDAPPVVFVTASQDSSIAVTALKAGAADYLVKDTQGDFVPLLQVAA 120

Query: 121 NGALEDPAGR-----APEGARRSRGRGARFA 146
           + AL     R     A    R SR R A  A
Sbjct: 121 DQALRQAVIRKARDDAEAEVRASRDRYAALA 151


>ref|YP_001240181.1| signal transduction histidine kinase [Bradyrhizobium sp. BTAi1]
 gb|ABQ36275.1| signal transduction histidine kinase [Bradyrhizobium sp. BTAi1]
          Length = 362

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 96/124 (77%), Positives = 108/124 (87%)

Query: 1   MTNATPTLLYIDDDAALARLVERGLTRAGYKVVHAASGQEGLDRLGQGGIDVVALDQYMP 60
           M++A PTLLYIDDDA LARLVERGL R G+ V HA  G  GL+R+  GGIDVVALDQYMP
Sbjct: 1   MSSAAPTLLYIDDDATLARLVERGLKRLGFTVEHAPDGAAGLERIQHGGIDVVALDQYMP 60

Query: 61  GLDGLETLEQILKIPDAPPVVFVTASQDSAIAVTALKAGAADYLVKDVRGEFIPLLQVAV 120
           GLDGLETLE+I+ +P+APPVVFVTASQDS IAVTALKAGAADYLVKD++GEF+PLLQVA 
Sbjct: 61  GLDGLETLERIMALPEAPPVVFVTASQDSKIAVTALKAGAADYLVKDLQGEFVPLLQVAA 120

Query: 121 NGAL 124
            GAL
Sbjct: 121 EGAL 124


>ref|YP_004109391.1| signal transduction histidine kinase [Rhodopseudomonas palustris
           DX-1]
 gb|ADU44658.1| signal transduction histidine kinase [Rhodopseudomonas palustris
           DX-1]
          Length = 362

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/151 (68%), Positives = 113/151 (74%), Gaps = 5/151 (3%)

Query: 1   MTNATPTLLYIDDDAALARLVERGLTRAGYKVVHAASGQEGLDRLGQGGIDVVALDQYMP 60
           MT+A PTLLYIDDD AL RLV RGL R G+ V H  SG+ GL+RL QGGIDV+ALDQYMP
Sbjct: 1   MTDAKPTLLYIDDDEALGRLVSRGLQRQGFCVEHVLSGEAGLERLRQGGIDVIALDQYMP 60

Query: 61  GLDGLETLEQILKIPDAPPVVFVTASQDSAIAVTALKAGAADYLVKDVRGEFIPLLQVAV 120
           GLDGLETLEQI  IPD PPVVFVTASQDS IAVTALKAGA DYLVKD +GEF+PLLQVA 
Sbjct: 61  GLDGLETLEQIQSIPDPPPVVFVTASQDSKIAVTALKAGADDYLVKDTQGEFVPLLQVAA 120

Query: 121 NGALEDPAGR-----APEGARRSRGRGARFA 146
           + AL+    R     A    R SR R A  A
Sbjct: 121 DQALKQAMVRKARDDAEAEVRASRDRYAALA 151


>ref|YP_001991694.1| signal transduction histidine kinase [Rhodopseudomonas palustris
           TIE-1]
 gb|ACF01219.1| signal transduction histidine kinase [Rhodopseudomonas palustris
           TIE-1]
          Length = 363

 Score =  193 bits (491), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 104/151 (68%), Positives = 113/151 (74%), Gaps = 5/151 (3%)

Query: 1   MTNATPTLLYIDDDAALARLVERGLTRAGYKVVHAASGQEGLDRLGQGGIDVVALDQYMP 60
           MT+A PTLLYIDDD AL RLV RGL R G+ V H  SG+ GL+RL QGGIDV+ALDQYMP
Sbjct: 1   MTDAKPTLLYIDDDEALGRLVSRGLQRQGFCVEHVLSGEAGLERLRQGGIDVIALDQYMP 60

Query: 61  GLDGLETLEQILKIPDAPPVVFVTASQDSAIAVTALKAGAADYLVKDVRGEFIPLLQVAV 120
           GLDGLETLEQI  IPD PPVVFVTASQDS IAVTALKAGA DYLVKD +GEF+PLLQVA 
Sbjct: 61  GLDGLETLEQIQAIPDPPPVVFVTASQDSKIAVTALKAGADDYLVKDTQGEFVPLLQVAA 120

Query: 121 NGALEDPAGR-----APEGARRSRGRGARFA 146
           + AL+    R     A    R SR R A  A
Sbjct: 121 DQALKQAMVRKARDDAEAEVRASRDRYAALA 151