BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0033.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770927.1| two-component response regulator [Bradyrhizobiu... 372 e-101 ref|ZP_01047145.1| Signal transduction histidine kinase [Nitroba... 361 4e-98 ref|YP_318369.1| Signal transduction histidine kinase [Nitrobact... 361 5e-98 ref|YP_577444.1| signal transduction histidine kinase [Nitrobact... 360 1e-97 ref|YP_486636.1| signal transduction histidine kinase [Rhodopseu... 359 2e-97 >ref|NP_770927.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC49552.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] Length = 371 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/224 (82%), Positives = 204/224 (91%) Query: 1 VHASRDRYAALAAEREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRV 60 +HASRDRYAALAAERE+LLREVNHRVGNSLQIIASLLHLQA+SA Q++VKAALTNAMGRV Sbjct: 148 IHASRDRYAALAAEREMLLREVNHRVGNSLQIIASLLHLQASSAGQEEVKAALTNAMGRV 207 Query: 61 AAVAQVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLKADPIEIDPDRAVA 120 AAVAQVHRRLYTS D K+V+LNQYL++LLEDLRRSAEGN+MSRLTLKA+PIEIDPDRAVA Sbjct: 208 AAVAQVHRRLYTSQDLKSVVLNQYLDSLLEDLRRSAEGNRMSRLTLKAEPIEIDPDRAVA 267 Query: 121 IGIIVNELVMNAVKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGTGMGQR 180 +GIIVNELVMNAVKYAYPDGAGPIHVEL QG++L LAI+DDGVG + KADPR TGMGQR Sbjct: 268 VGIIVNELVMNAVKYAYPDGAGPIHVELTLQGENLLLAIADDGVGDNVKADPRSTGMGQR 327 Query: 181 IVSAMAAKLDASVERDPGHKGTRFVVRFARVSPALDKSTSAAAS 224 IV+AMA KLDASVERDP H GTR +RF R+ A KS SAAAS Sbjct: 328 IVAAMATKLDASVERDPAHSGTRIFLRFPRIPVAPGKSNSAAAS 371 >ref|ZP_01047145.1| Signal transduction histidine kinase [Nitrobacter sp. Nb-311A] gb|EAQ34886.1| Signal transduction histidine kinase [Nitrobacter sp. Nb-311A] Length = 362 Score = 361 bits (927), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 179/224 (79%), Positives = 196/224 (87%) Query: 1 VHASRDRYAALAAEREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRV 60 V ASRDRYAALAAERE+LLREVNHR+GNSLQIIASLLHLQANS+ ++D+KAALTNAMGRV Sbjct: 139 VRASRDRYAALAAEREMLLREVNHRIGNSLQIIASLLHLQANSSPEEDIKAALTNAMGRV 198 Query: 61 AAVAQVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLKADPIEIDPDRAVA 120 AAVAQVHRRLYTSHD K+V+LNQYLEALLEDLRRSAEGN+MSRL LKA PIEIDPDRAVA Sbjct: 199 AAVAQVHRRLYTSHDLKSVLLNQYLEALLEDLRRSAEGNRMSRLDLKAQPIEIDPDRAVA 258 Query: 121 IGIIVNELVMNAVKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGTGMGQR 180 IGIIVNELVMN+VKYAYPDG GPIHVEL GDD+ L+I+DDGVG + KADPR TGMGQR Sbjct: 259 IGIIVNELVMNSVKYAYPDGPGPIHVELVTNGDDVVLSIADDGVGLNAKADPRSTGMGQR 318 Query: 181 IVSAMAAKLDASVERDPGHKGTRFVVRFARVSPALDKSTSAAAS 224 IVSAMA KLDA ERDP H GTR V+RF R P + SA A+ Sbjct: 319 IVSAMAQKLDAQAERDPTHAGTRIVLRFRRGMPDVTDPLSATAA 362 >ref|YP_318369.1| Signal transduction histidine kinase [Nitrobacter winogradskyi Nb-255] gb|ABA05017.1| signal transduction histidine kinase [Nitrobacter winogradskyi Nb-255] Length = 362 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 176/224 (78%), Positives = 196/224 (87%) Query: 1 VHASRDRYAALAAEREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRV 60 V ASRDRYAALAAERE+LLREVNHR+GNSLQIIASLLHLQANS+ ++D+KAALTNAMGRV Sbjct: 139 VRASRDRYAALAAEREMLLREVNHRIGNSLQIIASLLHLQANSSPEEDIKAALTNAMGRV 198 Query: 61 AAVAQVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLKADPIEIDPDRAVA 120 AAVAQVHRRLYTSHD K+V+LNQYLEALLEDLRRS EGN+MSRL LKA P+EIDPDRAVA Sbjct: 199 AAVAQVHRRLYTSHDLKSVLLNQYLEALLEDLRRSTEGNRMSRLDLKAQPVEIDPDRAVA 258 Query: 121 IGIIVNELVMNAVKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGTGMGQR 180 IGIIVNELVMNAVKYAYPDG GPIHVEL GDD+ L+I+DDGVG + ++DPR TGMGQR Sbjct: 259 IGIIVNELVMNAVKYAYPDGPGPIHVELASDGDDIVLSITDDGVGLNARSDPRSTGMGQR 318 Query: 181 IVSAMAAKLDASVERDPGHKGTRFVVRFARVSPALDKSTSAAAS 224 IVSAMA KLDA ERDP H GTR V+RF +P + K SA A+ Sbjct: 319 IVSAMAQKLDAQAERDPTHAGTRIVLRFRSGTPQVAKPMSATAA 362 >ref|YP_577444.1| signal transduction histidine kinase [Nitrobacter hamburgensis X14] gb|ABE62984.1| signal transduction histidine kinase [Nitrobacter hamburgensis X14] Length = 362 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 177/224 (79%), Positives = 198/224 (88%), Gaps = 1/224 (0%) Query: 1 VHASRDRYAALAAEREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRV 60 + ASRDRYAALA EREVLLREVNHRVGNSLQIIASLLHLQANS+ ++D+KAALT AMGRV Sbjct: 139 IRASRDRYAALATEREVLLREVNHRVGNSLQIIASLLHLQANSSPEEDIKAALTAAMGRV 198 Query: 61 AAVAQVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLKADPIEIDPDRAVA 120 AAVAQVHRRLYTSHD K+V+LNQYLEALLEDLRRSAEGN+MSRL LKA+P+EIDPDRAVA Sbjct: 199 AAVAQVHRRLYTSHDLKSVLLNQYLEALLEDLRRSAEGNRMSRLDLKAEPVEIDPDRAVA 258 Query: 121 IGIIVNELVMNAVKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGTGMGQR 180 IGIIVNELVMNAVKYAYPDG GPIHV+LK G +++L+I+DDGVG + KADPR TGMGQR Sbjct: 259 IGIIVNELVMNAVKYAYPDGPGPIHVQLKTDGGNIELSIADDGVGLNAKADPRSTGMGQR 318 Query: 181 IVSAMAAKLDASVERDPGHKGTRFVVRFAR-VSPALDKSTSAAA 223 IVSAMA KLDA ERDP H GTR V+RF R +SPA ++ AA Sbjct: 319 IVSAMAQKLDAQAERDPTHAGTRIVLRFRRDISPATKTRSATAA 362 >ref|YP_486636.1| signal transduction histidine kinase [Rhodopseudomonas palustris HaA2] gb|ABD07725.1| signal transduction histidine kinase [Rhodopseudomonas palustris HaA2] Length = 361 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 177/214 (82%), Positives = 194/214 (90%) Query: 1 VHASRDRYAALAAEREVLLREVNHRVGNSLQIIASLLHLQANSATQQDVKAALTNAMGRV 60 V ASRDRYAALAAERE+LLREVNHRVGNSLQIIASLLHLQA+S+ + +VKAALTNAMGRV Sbjct: 141 VRASRDRYAALAAEREMLLREVNHRVGNSLQIIASLLHLQASSSKESEVKAALTNAMGRV 200 Query: 61 AAVAQVHRRLYTSHDFKTVMLNQYLEALLEDLRRSAEGNKMSRLTLKADPIEIDPDRAVA 120 AAVAQVHRRLYTSHD K+VMLNQYLEALLEDLRRSAEGN+MSRLTL A+ +EIDPDRAVA Sbjct: 201 AAVAQVHRRLYTSHDLKSVMLNQYLEALLEDLRRSAEGNRMSRLTLDAEAVEIDPDRAVA 260 Query: 121 IGIIVNELVMNAVKYAYPDGAGPIHVELKPQGDDLQLAISDDGVGFSDKADPRGTGMGQR 180 IGI+VNELVMNAVKYAYP+G GPIHV LK QGDDL+LAISDDGVG + KA+P TGMGQR Sbjct: 261 IGIVVNELVMNAVKYAYPEGKGPIHVVLKAQGDDLELAISDDGVGLAVKANPHSTGMGQR 320 Query: 181 IVSAMAAKLDASVERDPGHKGTRFVVRFARVSPA 214 IV+AMA KLDASVERDP H GTR V+RF R + A Sbjct: 321 IVNAMATKLDASVERDPAHAGTRMVLRFRRTNIA 354