BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0029.p (478 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578789.1| RND efflux system, outer membrane lipoprotein, ... 671 0.0 ref|YP_001419047.1| RND efflux system outer membrane lipoprotein... 516 e-144 ref|YP_486516.1| RND efflux system, outer membrane lipoprotein, ... 481 e-133 ref|YP_569699.1| RND efflux system outer membrane lipoprotein No... 473 e-131 ref|YP_002289044.1| RND efflux system, outer membrane lipoprotei... 469 e-130 >ref|YP_578789.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] gb|ABE64329.1| RND efflux system, outer membrane lipoprotein, NodT [Nitrobacter hamburgensis X14] Length = 499 Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/460 (77%), Positives = 406/460 (88%), Gaps = 1/460 (0%) Query: 16 LSLGLSGCIPGAEKPELSLEVPASYKTAAKGDADAAVPALAWWRGFRSPELTGLMESAQL 75 L+ LSGCI G+E+P+L+LE+P +Y+ A++ DAAVP+L WWRGFRS ELT LME+AQ Sbjct: 30 LAPALSGCILGSERPDLNLEIPTTYREASRAAPDAAVPSLDWWRGFRSKELTSLMEAAQT 89 Query: 76 YNLDIAVAIAQIVQADAQVGVSGAALLPSISGSANAERQRVATGSSSSFGTS-GTFSQYS 134 NLDIAVA AQI+QADAQ G++GA LLPS++G+A AER R A + + TFSQY+ Sbjct: 90 ANLDIAVAYAQIIQADAQAGIAGAPLLPSVTGTATAERARSAASTIGGVSSPPATFSQYN 149 Query: 135 LGLSASYIVDFWGKNRATLSASEESATVARYNREVVALTTMATVANTYFQLLAAQDQIKV 194 +GL+ASY++DFWGKNRATL A+EE+ATVARYNR+VV LTT+ TVANTYFQ+LAAQDQ++V Sbjct: 150 VGLTASYMIDFWGKNRATLYAAEENATVARYNRDVVTLTTVVTVANTYFQILAAQDQLRV 209 Query: 195 TRRNLAAAERILALIKSQFAGGTASQLDLSQQEALVATQRAAIPPLEVTVGQNSAALAVL 254 RRNLAAAERIL LIK QFAGGTASQLDLSQQEALVATQRAAIPPL+VT+ QN AALAVL Sbjct: 210 VRRNLAAAERILELIKKQFAGGTASQLDLSQQEALVATQRAAIPPLQVTLRQNIAALAVL 269 Query: 255 VARAPADFKVRGGSTTQIAVPRVTPGLPSELLYQRPDVREAEAQLASSNFSVDAARAAFF 314 VARAPA+FKV GG+TTQI VPRVTPGLPSELLYQRPD+R+AEAQLASSNFSV+AARAAFF Sbjct: 270 VARAPANFKVSGGATTQITVPRVTPGLPSELLYQRPDIRQAEAQLASSNFSVEAARAAFF 329 Query: 315 PQIQLTGTTGFQSAALAALFAPGAWYYTLAAGLTQPLFDGFLLESQLKLAKGQQLQNLQA 374 PQIQLTG TG QSAALAALF PGAWYYTLAA LTQP+FDGFLLESQLK AKG QLQ LQA Sbjct: 330 PQIQLTGQTGSQSAALAALFGPGAWYYTLAASLTQPIFDGFLLESQLKQAKGLQLQYLQA 389 Query: 375 YRKAVLSAFADVEKALIALQKYTLQERLQSDVVAASRKAFEVAETQLRGGTVNLITVLQA 434 YRKAVLSAFADVEKAL+ALQ+YTLQERLQ+DVV+ASRKAFEV+ETQ RGGTVNL+TVLQ Sbjct: 390 YRKAVLSAFADVEKALVALQQYTLQERLQNDVVSASRKAFEVSETQFRGGTVNLLTVLQT 449 Query: 435 QQTLFTAENNLVTVRLNKLLAASSLFQALGGGWTPAGTLA 474 +QTLFTAEN LV VRL KLLAASSLFQALGGGW P T++ Sbjct: 450 EQTLFTAENVLVQVRLTKLLAASSLFQALGGGWVPERTVS 489 >ref|YP_001419047.1| RND efflux system outer membrane lipoprotein [Xanthobacter autotrophicus Py2] gb|ABS69390.1| RND efflux system, outer membrane lipoprotein, NodT family [Xanthobacter autotrophicus Py2] Length = 470 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 271/447 (60%), Positives = 338/447 (75%), Gaps = 4/447 (0%) Query: 23 CIPGAEKPELSLEVPASYKTAAKGDADAAVPALAWWRGFRSPELTGLMESAQLYNLDIAV 82 C+P P++ + P Y A + +A +P WWR FRS +LT + A + NLDIAV Sbjct: 28 CLPQEPAPDVGIATPTHY-VEAPANPNAHLPPPEWWRSFRSSDLTRFVAEANVDNLDIAV 86 Query: 83 AIAQIVQADAQVGVSGAALLPSISGSANAERQRVATGSSSSFGTSGTFSQYSLGLSASYI 142 A A+IVQADAQVG+SGA L P+++ + +A + R + S + TSG QY LGLSA Y+ Sbjct: 87 ATAEIVQADAQVGISGAPLYPNLTFAGSAAQIRSSGSSGNPGNTSG---QYILGLSAGYM 143 Query: 143 VDFWGKNRATLSASEESATVARYNREVVALTTMATVANTYFQLLAAQDQIKVTRRNLAAA 202 VDFWGKNR+ L A+EE+A AR+NR+VV L+T VANTYFQ+L A+DQ+++ + +LAAA Sbjct: 144 VDFWGKNRSGLLAAEENAAAARFNRDVVTLSTQVAVANTYFQILGARDQLRIAQNSLAAA 203 Query: 203 ERILALIKSQFAGGTASQLDLSQQEALVATQRAAIPPLEVTVGQNSAALAVLVARAPADF 262 RIL ++K QFAGGT SQLD+SQQEALVA RA+IPP+E+T+ QN AALAVL+AR P Sbjct: 204 TRILDIVKRQFAGGTVSQLDVSQQEALVAQVRASIPPIEITLRQNWAALAVLLARTPVAL 263 Query: 263 KVRGGSTTQIAVPRVTPGLPSELLYQRPDVREAEAQLASSNFSVDAARAAFFPQIQLTGT 322 GS +QI VPR+TPGLPS+LL +RPD+ AEAQL + ++V+AARAA PQIQLTGT Sbjct: 264 TPPQGSLSQITVPRITPGLPSDLLTRRPDIALAEAQLQAGGYNVEAARAAMLPQIQLTGT 323 Query: 323 TGFQSAALAALFAPGAWYYTLAAGLTQPLFDGFLLESQLKLAKGQQLQNLQAYRKAVLSA 382 G QSAAL ALFAPGAWYYTL AGLTQP+FDG+LL+SQL AKG Q+Q+LQ YRKA+LSA Sbjct: 324 GGVQSAALQALFAPGAWYYTLVAGLTQPIFDGYLLQSQLDQAKGVQVQDLQVYRKAILSA 383 Query: 383 FADVEKALIALQKYTLQERLQSDVVAASRKAFEVAETQLRGGTVNLITVLQAQQTLFTAE 442 FADVEKAL+AL + Q +LQ+DVV +SR AF VAE+QL GGT L+ VLQAQQT FTAE Sbjct: 384 FADVEKALVALDQTNKQVKLQADVVESSRTAFRVAESQLAGGTTTLVAVLQAQQTYFTAE 443 Query: 443 NNLVTVRLNKLLAASSLFQALGGGWTP 469 N L RL++LLAA+SLFQALGGGW P Sbjct: 444 NGLAQARLSRLLAATSLFQALGGGWGP 470 >ref|YP_486516.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris HaA2] gb|ABD07605.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris HaA2] Length = 482 Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust. Identities = 252/465 (54%), Positives = 335/465 (72%), Gaps = 2/465 (0%) Query: 6 RFLRVAAFGGLSLGLSGCIPGAEKPELSLEVPASYKTAAKGDADAAVPALAWWRGFRSPE 65 R +R+ A LG GCI + P+ +L++P YK+A+ DA PAL WWRGFRS E Sbjct: 10 RSVRMVAASAFVLGAGGCILTKDLPDPALDLPPRYKSASLNTVDAP-PALDWWRGFRSAE 68 Query: 66 LTGLMESAQLYNLDIAVAIAQIVQADAQVGVSGAALLPSISGSANAERQRVATGSSSSFG 125 LT LME AQ NLDIA A A+I+QADAQ ++GAALLPSI+G+ + + + + + S+ Sbjct: 69 LTQLMEEAQTVNLDIAAATARILQADAQARITGAALLPSITGNGSGSQNKTSGSNVSNTT 128 Query: 126 TSGT-FSQYSLGLSASYIVDFWGKNRATLSASEESATVARYNREVVALTTMATVANTYFQ 184 +G ++ YS LSASY +DFWGKN A+EE+AT R++R+VVALTTMA+VAN YFQ Sbjct: 129 IAGRRYATYSASLSASYEIDFWGKNHDAALAAEETATATRFDRDVVALTTMASVANAYFQ 188 Query: 185 LLAAQDQIKVTRRNLAAAERILALIKSQFAGGTASQLDLSQQEALVATQRAAIPPLEVTV 244 +LA QD+++ +R N+A+A+RIL IK + A GT S LD++QQE+++A QRAA+PPL++T+ Sbjct: 189 VLATQDRLRTSRENIASAQRILDAIKQRLAAGTGSDLDVAQQESVLANQRAAVPPLQLTL 248 Query: 245 GQNSAALAVLVARAPADFKVRGGSTTQIAVPRVTPGLPSELLYQRPDVREAEAQLASSNF 304 QN LA LV+R P K+ GGS +I+ PRVTPGLPSELL QRPD+R EAQLAS+ Sbjct: 249 AQNINTLATLVSRPPESVKIVGGSLNRISSPRVTPGLPSELLTQRPDIRRQEAQLASATA 308 Query: 305 SVDAARAAFFPQIQLTGTTGFQSAALAALFAPGAWYYTLAAGLTQPLFDGFLLESQLKLA 364 +V +ARA FFP IQLTG G+QSA LA+LF P A + +LAAGLTQP+FDG ++ L Sbjct: 309 NVGSARAQFFPSIQLTGQGGYQSAVLASLFTPQATFSSLAAGLTQPIFDGGRIQGNFDLT 368 Query: 365 KGQQLQNLQAYRKAVLSAFADVEKALIALQKYTLQERLQSDVVAASRKAFEVAETQLRGG 424 + QQ + LQ YRK V+SAFADV+ AL ++++ T + RLQ VVA+SR+AF +AE QLR G Sbjct: 369 RAQQEELLQTYRKTVVSAFADVDNALESIKQNTERLRLQRQVVASSRRAFNLAEQQLRAG 428 Query: 425 TVNLITVLQAQQTLFTAENNLVTVRLNKLLAASSLFQALGGGWTP 469 T +++TVL Q TLFTAE+ L+ +L + LA SLFQALGGGW P Sbjct: 429 TADIVTVLNTQLTLFTAEDALIQTQLARYLAIVSLFQALGGGWEP 473 >ref|YP_569699.1| RND efflux system outer membrane lipoprotein NodT [Rhodopseudomonas palustris BisB5] gb|ABE39798.1| RND efflux system, outer membrane lipoprotein, NodT [Rhodopseudomonas palustris BisB5] Length = 482 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 250/465 (53%), Positives = 333/465 (71%), Gaps = 2/465 (0%) Query: 6 RFLRVAAFGGLSLGLSGCIPGAEKPELSLEVPASYKTAAKGDADAAVPALAWWRGFRSPE 65 R +R+ A L +G GCI + P+ +L++P YK AA DA PAL WWRGFRSPE Sbjct: 10 RSVRMVAASALVVGAGGCILTKDLPDPALDLPPRYKAAALTTTDAP-PALDWWRGFRSPE 68 Query: 66 LTGLMESAQLYNLDIAVAIAQIVQADAQVGVSGAALLPSISGSANAERQRVATGSSSSFG 125 LT LME AQ NLDIA A ++I+QADAQ ++GAALLPS++G+++ + + + + S+ Sbjct: 69 LTQLMEEAQTVNLDIAAATSRILQADAQARITGAALLPSLTGNSSGSQNKTSGSNVSNTT 128 Query: 126 TSGT-FSQYSLGLSASYIVDFWGKNRATLSASEESATVARYNREVVALTTMATVANTYFQ 184 +G FS Y+ LSASY +DFWGKNR A+EE+AT R++R+VVALTTMA+VAN YFQ Sbjct: 129 IAGRRFSTYAASLSASYEIDFWGKNRDAALAAEETATANRFDRDVVALTTMASVANAYFQ 188 Query: 185 LLAAQDQIKVTRRNLAAAERILALIKSQFAGGTASQLDLSQQEALVATQRAAIPPLEVTV 244 +LA+QD+I+ + N+A+A+RIL IK + A GT S LD++QQE+++A QRAA+P L VT+ Sbjct: 189 VLASQDRIRTAQENIASAQRILDAIKQRLAAGTGSDLDVAQQESVLANQRAAVPLLRVTL 248 Query: 245 GQNSAALAVLVARAPADFKVRGGSTTQIAVPRVTPGLPSELLYQRPDVREAEAQLASSNF 304 QN LA LV+R P K+ GGS +++ P VTPG+PSELL QRPD+R EAQLA++ Sbjct: 249 AQNINTLATLVSRPPEAVKILGGSLNRLSSPLVTPGMPSELLTQRPDIRRQEAQLAAATA 308 Query: 305 SVDAARAAFFPQIQLTGTTGFQSAALAALFAPGAWYYTLAAGLTQPLFDGFLLESQLKLA 364 +V +ARA FFP IQLTG G+QSA LA+LF P A + LAAGLTQP+FDG + L Sbjct: 309 NVGSARAQFFPSIQLTGQGGYQSAVLASLFTPQATFSNLAAGLTQPIFDGGRISGNFDLT 368 Query: 365 KGQQLQNLQAYRKAVLSAFADVEKALIALQKYTLQERLQSDVVAASRKAFEVAETQLRGG 424 K QQ + LQ YRK V+SAFADV+ AL ++++ T + RLQ VVA+SR+AF +AE QLR G Sbjct: 369 KAQQDELLQTYRKTVVSAFADVDNALESIKQNTERLRLQRQVVASSRRAFSLAEQQLRAG 428 Query: 425 TVNLITVLQAQQTLFTAENNLVTVRLNKLLAASSLFQALGGGWTP 469 T +++TVL Q TLF AE++L+ +L + LA SLFQALGGGW P Sbjct: 429 TADIVTVLNTQLTLFQAEDSLIQTQLARYLAIVSLFQALGGGWEP 473 >ref|YP_002289044.1| RND efflux system, outer membrane lipoprotein, NodT [Oligotropha carboxidovorans OM5] ref|YP_004632916.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Oligotropha carboxidovorans OM5] gb|ACI93179.1| RND efflux system, outer membrane lipoprotein, NodT [Oligotropha carboxidovorans OM5] gb|AEI03098.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Oligotropha carboxidovorans OM4] gb|AEI06675.1| efflux transporter, outer membrane factor lipoprotein, NodT family [Oligotropha carboxidovorans OM5] Length = 512 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 242/449 (53%), Positives = 317/449 (70%), Gaps = 2/449 (0%) Query: 23 CIPGAEKPELSLEVPASYKTAAKGDADAAVPALAWWRGFRSPELTGLMESAQLYNLDIAV 82 CI + P+L+L++P +Y+ A A P L WWRGFRS ELT LME AQ NLDI Sbjct: 47 CIMKQDLPDLALDIPVAYQKDATPQRQDAPPTLDWWRGFRSAELTQLMEEAQRVNLDITA 106 Query: 83 AIAQIVQADAQVGVSGAALLPSISGSANAERQRVATG--SSSSFGTSGTFSQYSLGLSAS 140 A A+++QADA +GAALLP++ +A+A R + ++G ++ + GT + YS LSAS Sbjct: 107 ATARLLQADAMTRTAGAALLPTLDANASATRSKSSSGYLNNGTVAARGTINTYSTSLSAS 166 Query: 141 YIVDFWGKNRATLSASEESATVARYNREVVALTTMATVANTYFQLLAAQDQIKVTRRNLA 200 Y +D WGKNR L A+EESA +RY+R+ VALT MA+VAN YFQ+LAAQD+I RN+A Sbjct: 167 YEIDLWGKNRDALLAAEESANASRYDRDTVALTAMASVANAYFQVLAAQDRIATAERNIA 226 Query: 201 AAERILALIKSQFAGGTASQLDLSQQEALVATQRAAIPPLEVTVGQNSAALAVLVARAPA 260 +A+RI IK++ GT S LDL+QQE+L+A QRAA+PPL T+ QN LA LVAR P Sbjct: 227 SAKRIYDAIKARVDAGTGSDLDLAQQESLLANQRAAVPPLRQTLTQNLNILATLVARPPE 286 Query: 261 DFKVRGGSTTQIAVPRVTPGLPSELLYQRPDVREAEAQLASSNFSVDAARAAFFPQIQLT 320 +RGGS +++ PRVTPGLPSELL QRPD+R EAQLAS+ +V +ARA FFP IQLT Sbjct: 287 RVHIRGGSLGRVSAPRVTPGLPSELLIQRPDIRRQEAQLASATANVGSARAQFFPSIQLT 346 Query: 321 GTTGFQSAALAALFAPGAWYYTLAAGLTQPLFDGFLLESQLKLAKGQQLQNLQAYRKAVL 380 G G+QSAAL+ALF P + ++ LAAGLTQP+FD +++ L K QQ + LQ YRK V+ Sbjct: 347 GQGGYQSAALSALFMPQSAFFNLAAGLTQPIFDAGRIQANFDLTKAQQDELLQTYRKTVI 406 Query: 381 SAFADVEKALIALQKYTLQERLQSDVVAASRKAFEVAETQLRGGTVNLITVLQAQQTLFT 440 SAF+DV AL A+++ + RLQ VVA+SR+AF+++E QLR GT ++ITVL QQTLF Sbjct: 407 SAFSDVNTALDAIRQTAQRLRLQRVVVASSRRAFKLSEDQLRAGTADIITVLNTQQTLFQ 466 Query: 441 AENNLVTVRLNKLLAASSLFQALGGGWTP 469 AE+ L+ +L L + SLFQALGGGW P Sbjct: 467 AEDTLLQAQLAWLQSYVSLFQALGGGWEP 495